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Cow genome map

           
Conread name:
           
Utr2-C0001811_G15
        

               
Conread position:
               
2-387
               

               
Cow position:
               
chr20:40726305-40726661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
103, 47
               

               
Conread position:
               
7-368
               

               
Cow position:
               
chr20:11359334-11359684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 23
               

               
Conread position:
               
11-226
               

               
Cow position:
               
chr20:21344770-21344555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
14-246
               

               
Cow position:
               
chr20:35130630-35130399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
64, 15
               

               
Conread position:
               
19-238
               

               
Cow position:
               
chr20:8246014-8245795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
136, 190
               

               
Conread position:
               
19-258
               

               
Cow position:
               
chr20:2823165-2822926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
125, 20
               

               
Conread position:
               
20-498
               

               
Cow position:
               
chr20:22007787-22007319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 189
               

               
Conread position:
               
21-283
               

               
Cow position:
               
chr20:17369952-17370220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
83, 28
               

               
Conread position:
               
21-500
               

               
Cow position:
               
chr20:33434871-33435356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 39
               

               
Conread position:
               
22-300
               

               
Cow position:
               
chr20:14739524-14739805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
49, 8
               

               
Conread position:
               
26-375
               

               
Cow position:
               
chr20:16818709-16818356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 14
               

               
Conread position:
               
29-278
               

               
Cow position:
               
chr20:21325619-21325362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 135
               

               
Conread position:
               
32-310
               

               
Cow position:
               
chr20:3283152-3282869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
33-368
               

               
Cow position:
               
chr20:38515069-38514729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
11, 24
               

               
Conread position:
               
34-296
               

               
Cow position:
               
chr20:14490526-14490269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
38, 65
               

               
Conread position:
               
34-317
               

               
Cow position:
               
chr20:1824348-1824634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
28, 11
               

               
Conread position:
               
35-499
               

               
Cow position:
               
chr20:19328683-19328213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 262
               

               
Conread position:
               
36-274
               

               
Cow position:
               
chr20:27315256-27315022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
69, 122
               

               
Conread position:
               
36-500
               

               
Cow position:
               
chr20:7658951-7659401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
38-257
               

               
Cow position:
               
chr20:25464768-25464988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
65, 127
               

               
Conread position:
               
38-497
               

               
Cow position:
               
chr20:35742049-35741569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
38-500
               

               
Cow position:
               
chr20:12205464-12205901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 69
               

               
Conread position:
               
39-213
               

               
Cow position:
               
chr20:40578396-40578566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
46, 109
               

               
Conread position:
               
39-255
               

               
Cow position:
               
chr20:28935364-28935580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
16, 40
               

               
Conread position:
               
39-299
               

               
Cow position:
               
chr20:23590478-23590732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 17
               

               
Conread position:
               
39-386
               

               
Cow position:
               
chr20:28517900-28518242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
22, 259
               

               
Conread position:
               
40-296
               

               
Cow position:
               
chr20:30744443-30744703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
40-346
               

               
Cow position:
               
chr20:16097120-16096810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
64, 180
               

               
Conread position:
               
41-256
               

               
Cow position:
               
chr20:33359194-33359415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
68, 84
               

               
Conread position:
               
41-283
               

               
Cow position:
               
chr20:21941697-21941465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
41-492
               

               
Cow position:
               
chr20:10200623-10200163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
41-497
               

               
Cow position:
               
chr20:3141848-3141399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 22
               

               
Conread position:
               
42-254
               

               
Cow position:
               
chr20:5078552-5078332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 84
               

               
Conread position:
               
42-295
               

               
Cow position:
               
chr20:25021705-25021447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
60, 170
               

               
Conread position:
               
42-362
               

               
Cow position:
               
chr20:23549031-23548699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
43-406
               

               
Cow position:
               
chr20:5078908-5078532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 34
               

               
Conread position:
               
43-500
               

               
Cow position:
               
chr20:34097674-34098145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 359
               

               
Conread position:
               
45-417
               

               
Cow position:
               
chr20:28594562-28594183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 33
               

               
Conread position:
               
45-476
               

               
Cow position:
               
chr20:15312923-15312496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
28, 64
               

               
Conread position:
               
46-273
               

               
Cow position:
               
chr20:31078056-31077821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
83, 183
               

               
Conread position:
               
46-418
               

               
Cow position:
               
chr20:41696027-41696394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
51, 85
               

               
Conread position:
               
48-236
               

               
Cow position:
               
chr20:11822744-11822556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
21, 62
               

               
Conread position:
               
48-279
               

               
Cow position:
               
chr20:37609889-37609657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
54, 22
               

               
Conread position:
               
48-296
               

               
Cow position:
               
chr20:35444838-35445085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
48-491
               

               
Cow position:
               
chr20:19237339-19236900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 91
               

               
Conread position:
               
49-218
               

               
Cow position:
               
chr20:17524538-17524368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
56, 20
               

               
Conread position:
               
49-252
               

               
Cow position:
               
chr20:34467693-34467889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
22, 52
               

               
Conread position:
               
49-268
               

               
Cow position:
               
chr20:32636066-32636281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
56, 91
               

               
Conread position:
               
49-268
               

               
Cow position:
               
chr20:37273260-37273044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
56, 104
               

               
Conread position:
               
49-272
               

               
Cow position:
               
chr20:2316160-2316383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
55, 92
               

               
Conread position:
               
49-272
               

               
Cow position:
               
chr20:8021402-8021170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
55, 23
               

               
Conread position:
               
49-284
               

               
Cow position:
               
chr20:14898006-14897767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
49-296
               

               
Cow position:
               
chr20:24115317-24115566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
49-397
               

               
Cow position:
               
chr20:11548463-11548803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 22
               

               
Conread position:
               
49-400
               

               
Cow position:
               
chr20:20926362-20926705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
56, 16
               

               
Conread position:
               
49-400
               

               
Cow position:
               
chr20:22937052-22937395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
56, 16
               

               
Conread position:
               
49-417
               

               
Cow position:
               
chr20:11611945-11611581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
53, 16
               

               
Conread position:
               
49-485
               

               
Cow position:
               
chr20:24070071-24069638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 108
               

               
Conread position:
               
49-490
               

               
Cow position:
               
chr20:41028757-41028306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
8, 29
               

               
Conread position:
               
49-492
               

               
Cow position:
               
chr20:5950374-5950812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 14
               

               
Conread position:
               
49-492
               

               
Cow position:
               
chr20:6257809-6258243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
19, 101
               

               
Conread position:
               
49-492
               

               
Cow position:
               
chr20:36779452-36779910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 268
               

               
Conread position:
               
49-497
               

               
Cow position:
               
chr20:7425928-7426373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 119
               

               
Conread position:
               
49-499
               

               
Cow position:
               
chr20:35176507-35176955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 286
               

               
Conread position:
               
49-500
               

               
Cow position:
               
chr20:8555999-8556461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 98
               

               
Conread position:
               
50-213
               

               
Cow position:
               
chr20:14460650-14460482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
50-222
               

               
Cow position:
               
chr20:5172874-5172704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
50-300
               

               
Cow position:
               
chr20:23384563-23384313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
10, 156
               

               
Conread position:
               
50-315
               

               
Cow position:
               
chr20:14283191-14282919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 254
               

               
Conread position:
               
50-319
               

               
Cow position:
               
chr20:27624271-27624005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
55, 106
               

               
Conread position:
               
50-339
               

               
Cow position:
               
chr20:12534482-12534766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
50-460
               

               
Cow position:
               
chr20:4334272-4334667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 100
               

               
Conread position:
               
50-477
               

               
Cow position:
               
chr20:13652116-13652521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 22
               

               
Conread position:
               
50-494
               

               
Cow position:
               
chr20:20359536-20359958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
252, 51
               

               
Conread position:
               
50-500
               

               
Cow position:
               
chr20:13023237-13023665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 15
               

               
Conread position:
               
50-501
               

               
Cow position:
               
chr20:39325657-39325197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 21
               

               
Conread position:
               
51-224
               

               
Cow position:
               
chr20:18500796-18500617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
51-278
               

               
Cow position:
               
chr20:30639513-30639747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
51-414
               

               
Cow position:
               
chr20:7737969-7738323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
51-416
               

               
Cow position:
               
chr20:15118543-15118177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 135
               

               
Conread position:
               
51-449
               

               
Cow position:
               
chr20:32523731-32523329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 102
               

               
Conread position:
               
51-500
               

               
Cow position:
               
chr20:4755570-4756012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
51-500
               

               
Cow position:
               
chr20:32513270-32512796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
52-313
               

               
Cow position:
               
chr20:20432472-20432734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
16, 73
               

               
Conread position:
               
52-357
               

               
Cow position:
               
chr20:34849522-34849843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
52-389
               

               
Cow position:
               
chr20:4891856-4892166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 27
               

               
Conread position:
               
52-500
               

               
Cow position:
               
chr20:28982958-28982510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
53, 26
               

               
Conread position:
               
52-500
               

               
Cow position:
               
chr20:41704424-41703967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 15
               

               
Conread position:
               
53-331
               

               
Cow position:
               
chr20:11002664-11002380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 12
               

               
Conread position:
               
53-500
               

               
Cow position:
               
chr20:22235563-22235128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 113
               

               
Conread position:
               
54-291
               

               
Cow position:
               
chr20:8679400-8679644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
48, 18
               

               
Conread position:
               
56-248
               

               
Cow position:
               
chr20:35310587-35310389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
48, 14
               

               
Conread position:
               
56-248
               

               
Cow position:
               
chr20:39136726-39136920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
49, 21
               

               
Conread position:
               
56-335
               

               
Cow position:
               
chr20:35207943-35208227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
56-440
               

               
Cow position:
               
chr20:8308263-8307894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
243, 15
               

               
Conread position:
               
56-447
               

               
Cow position:
               
chr20:41089532-41089919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 187
               

               
Conread position:
               
56-455
               

               
Cow position:
               
chr20:14433160-14433570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 115
               

               
Conread position:
               
56-498
               

               
Cow position:
               
chr20:39417643-39418079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
56-500
               

               
Cow position:
               
chr20:28296558-28296103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 239
               

               
Conread position:
               
57-235
               

               
Cow position:
               
chr20:20202478-20202298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 20
               

               
Conread position:
               
57-236
               

               
Cow position:
               
chr20:41515025-41514840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
57-271
               

               
Cow position:
               
chr20:7934537-7934327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 69
               

               
Conread position:
               
57-273
               

               
Cow position:
               
chr20:11920475-11920689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
103, 15
               

               
Conread position:
               
57-310
               

               
Cow position:
               
chr20:12782771-12783021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
57-385
               

               
Cow position:
               
chr20:6248340-6248665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 282
               

               
Conread position:
               
57-389
               

               
Cow position:
               
chr20:11135495-11135830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
57-402
               

               
Cow position:
               
chr20:5645036-5644702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
57-405
               

               
Cow position:
               
chr20:36741720-36741388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 20
               

               
Conread position:
               
57-436
               

               
Cow position:
               
chr20:29990192-29990555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
100, 9
               

               
Conread position:
               
57-447
               

               
Cow position:
               
chr20:36011052-36010664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 86
               

               
Conread position:
               
57-480
               

               
Cow position:
               
chr20:5814823-5814401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 10
               

               
Conread position:
               
57-485
               

               
Cow position:
               
chr20:3739749-3740172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
16, 126
               

               
Conread position:
               
57-500
               

               
Cow position:
               
chr20:15548635-15549084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 23
               

               
Conread position:
               
57-500
               

               
Cow position:
               
chr20:21372555-21372129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
57-500
               

               
Cow position:
               
chr20:34251411-34251865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
57-500
               

               
Cow position:
               
chr20:40303620-40304035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 191
               

               
Conread position:
               
58-248
               

               
Cow position:
               
chr20:18763397-18763205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 153
               

               
Conread position:
               
58-312
               

               
Cow position:
               
chr20:36239508-36239248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
58-461
               

               
Cow position:
               
chr20:13025366-13025756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
58-499
               

               
Cow position:
               
chr20:11741060-11741490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 14
               

               
Conread position:
               
58-500
               

               
Cow position:
               
chr20:7756379-7756816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 43
               

               
Conread position:
               
58-500
               

               
Cow position:
               
chr20:31927209-31927645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 7
               

               
Conread position:
               
59-195
               

               
Cow position:
               
chr20:11909428-11909568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
46, 35
               

               
Conread position:
               
59-500
               

               
Cow position:
               
chr20:4206211-4205776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 32
               

               
Conread position:
               
59-500
               

               
Cow position:
               
chr20:21345697-21345219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
60-347
               

               
Cow position:
               
chr20:25972135-25972433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
60-449
               

               
Cow position:
               
chr20:20099344-20099725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 50
               

               
Conread position:
               
60-499
               

               
Cow position:
               
chr20:25274037-25274466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
45, 32
               

               
Conread position:
               
61-310
               

               
Cow position:
               
chr20:11101659-11101416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
9, 98
               

               
Conread position:
               
61-447
               

               
Cow position:
               
chr20:30710389-30710775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 16
               

               
Conread position:
               
61-491
               

               
Cow position:
               
chr20:14980253-14980693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 17
               

               
Conread position:
               
62-500
               

               
Cow position:
               
chr20:42309711-42310149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 60
               

               
Conread position:
               
63-213
               

               
Cow position:
               
chr20:32067236-32067392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
63-257
               

               
Cow position:
               
chr20:31468403-31468604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 187
               

               
Conread position:
               
63-355
               

               
Cow position:
               
chr20:21428411-21428120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 103
               

               
Conread position:
               
65-296
               

               
Cow position:
               
chr20:24097246-24097019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 40
               

               
Conread position:
               
65-361
               

               
Cow position:
               
chr20:39016618-39016922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
65-461
               

               
Cow position:
               
chr20:5024716-5025091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
65-500
               

               
Cow position:
               
chr20:35146265-35145822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 87
               

               
Conread position:
               
65-500
               

               
Cow position:
               
chr20:39518263-39517824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 130
               

               
Conread position:
               
66-256
               

               
Cow position:
               
chr20:19746221-19746029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
36, 15
               

               
Conread position:
               
66-456
               

               
Cow position:
               
chr20:28441569-28441192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 92
               

               
Conread position:
               
66-491
               

               
Cow position:
               
chr20:27407646-27408056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
41, 12
               

               
Conread position:
               
66-491
               

               
Cow position:
               
chr20:33169622-33170053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 81
               

               
Conread position:
               
66-500
               

               
Cow position:
               
chr20:40422848-40423277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 240
               

               
Conread position:
               
67-193
               

               
Cow position:
               
chr20:33557644-33557514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
67-202
               

               
Cow position:
               
chr20:19622997-19623132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
37, 72
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr20:17733306-17733470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
67-236
               

               
Cow position:
               
chr20:36097772-36097598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
67-238
               

               
Cow position:
               
chr20:35605451-35605284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
67-246
               

               
Cow position:
               
chr20:16977586-16977776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
67-248
               

               
Cow position:
               
chr20:37358108-37357922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
67-254
               

               
Cow position:
               
chr20:7132875-7132686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 110
               

               
Conread position:
               
67-256
               

               
Cow position:
               
chr20:9033967-9034158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 135
               

               
Conread position:
               
67-258
               

               
Cow position:
               
chr20:2798746-2798934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
93, 42
               

               
Conread position:
               
67-258
               

               
Cow position:
               
chr20:6473984-6473789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
34, 109
               

               
Conread position:
               
67-258
               

               
Cow position:
               
chr20:14755594-14755784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 89
               

               
Conread position:
               
67-261
               

               
Cow position:
               
chr20:19201783-19201584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
67-269
               

               
Cow position:
               
chr20:3035588-3035378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
67-269
               

               
Cow position:
               
chr20:7155425-7155226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 30
               

               
Conread position:
               
67-292
               

               
Cow position:
               
chr20:7416913-7417145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
39, 12
               

               
Conread position:
               
67-311
               

               
Cow position:
               
chr20:20158380-20158140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
35, 73
               

               
Conread position:
               
67-317
               

               
Cow position:
               
chr20:5365177-5364926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 30
               

               
Conread position:
               
67-326
               

               
Cow position:
               
chr20:385014-385269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 163
               

               
Conread position:
               
67-329
               

               
Cow position:
               
chr20:14556502-14556770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
67-330
               

               
Cow position:
               
chr20:30755532-30755264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
38, 172
               

               
Conread position:
               
67-332
               

               
Cow position:
               
chr20:36211896-36212167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
35, 164
               

               
Conread position:
               
67-351
               

               
Cow position:
               
chr20:34083970-34083684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
36, 117
               

               
Conread position:
               
67-360
               

               
Cow position:
               
chr20:1293779-1294075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
38, 127
               

               
Conread position:
               
67-368
               

               
Cow position:
               
chr20:9376710-9376416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
67-383
               

               
Cow position:
               
chr20:38090165-38089844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
67-389
               

               
Cow position:
               
chr20:32709192-32709523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
26, 11
               

               
Conread position:
               
67-397
               

               
Cow position:
               
chr20:28818687-28819013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
38, 70
               

               
Conread position:
               
67-398
               

               
Cow position:
               
chr20:33819478-33819136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
36, 264
               

               
Conread position:
               
67-404
               

               
Cow position:
               
chr20:31311781-31311445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 138
               

               
Conread position:
               
67-405
               

               
Cow position:
               
chr20:38868870-38868557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
67-406
               

               
Cow position:
               
chr20:20124782-20125125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
34, 142
               

               
Conread position:
               
67-419
               

               
Cow position:
               
chr20:24712089-24711733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 38
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr20:11188575-11188920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 10
               

               
Conread position:
               
67-434
               

               
Cow position:
               
chr20:28249432-28249066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 208
               

               
Conread position:
               
67-444
               

               
Cow position:
               
chr20:31289754-31289371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 48
               

               
Conread position:
               
67-446
               

               
Cow position:
               
chr20:2298548-2298905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
67-453
               

               
Cow position:
               
chr20:32583571-32583170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
13, 343
               

               
Conread position:
               
67-489
               

               
Cow position:
               
chr20:11045923-11045502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 143
               

               
Conread position:
               
67-491
               

               
Cow position:
               
chr20:13269863-13269445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 91
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr20:6054258-6054700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 58
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr20:6603278-6602854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr20:10236067-10235665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
120, 41
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr20:11340556-11340992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 195
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr20:12995744-12996195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 160
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr20:13995059-13994622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 38
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr20:14759424-14759851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 91
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr20:17251968-17251521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 84
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr20:20352661-20353101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 256
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr20:20967563-20967153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 23
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr20:29755027-29754599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 113
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr20:29845304-29844868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 117
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr20:38818237-38817823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
68-230
               

               
Cow position:
               
chr20:34348965-34349131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
68-331
               

               
Cow position:
               
chr20:29085607-29085345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
94, 57
               

               
Conread position:
               
68-404
               

               
Cow position:
               
chr20:21721467-21721119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
68-481
               

               
Cow position:
               
chr20:7438608-7439017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 82
               

               
Conread position:
               
68-484
               

               
Cow position:
               
chr20:35888511-35888942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
37, 112
               

               
Conread position:
               
68-492
               

               
Cow position:
               
chr20:7441894-7442302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 94
               

               
Conread position:
               
68-492
               

               
Cow position:
               
chr20:38551626-38551195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 118
               

               
Conread position:
               
68-500
               

               
Cow position:
               
chr20:20984244-20983820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
68-500
               

               
Cow position:
               
chr20:28605454-28605018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 85
               

               
Conread position:
               
68-500
               

               
Cow position:
               
chr20:39398730-39398301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 225
               

               
Conread position:
               
69-231
               

               
Cow position:
               
chr20:26424655-26424489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
69-248
               

               
Cow position:
               
chr20:27323516-27323332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
69-259
               

               
Cow position:
               
chr20:34271577-34271381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
69-264
               

               
Cow position:
               
chr20:11499250-11499062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
36, 75
               

               
Conread position:
               
69-295
               

               
Cow position:
               
chr20:35589436-35589671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
69-335
               

               
Cow position:
               
chr20:25953514-25953247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
33, 106
               

               
Conread position:
               
69-426
               

               
Cow position:
               
chr20:23540924-23541266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 79
               

               
Conread position:
               
69-492
               

               
Cow position:
               
chr20:747179-746773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
69-500
               

               
Cow position:
               
chr20:1139519-1139960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 18
               

               
Conread position:
               
69-500
               

               
Cow position:
               
chr20:6240273-6240716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 146
               

               
Conread position:
               
69-500
               

               
Cow position:
               
chr20:9014104-9014535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 39
               

               
Conread position:
               
69-500
               

               
Cow position:
               
chr20:12581709-12582134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 98
               

               
Conread position:
               
69-500
               

               
Cow position:
               
chr20:14572130-14572543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 100
               

               
Conread position:
               
70-205
               

               
Cow position:
               
chr20:4566896-4567037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
70-271
               

               
Cow position:
               
chr20:35442036-35442239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
35, 11
               

               
Conread position:
               
71-221
               

               
Cow position:
               
chr20:5268595-5268750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
71-226
               

               
Cow position:
               
chr20:10715426-10715272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
31, 49
               

               
Conread position:
               
71-232
               

               
Cow position:
               
chr20:8442210-8442373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
71-273
               

               
Cow position:
               
chr20:31845043-31845244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
31, 80
               

               
Conread position:
               
71-278
               

               
Cow position:
               
chr20:23935934-23936148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 7
               

               
Conread position:
               
71-298
               

               
Cow position:
               
chr20:36806762-36806537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
71-373
               

               
Cow position:
               
chr20:20892431-20892725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
34, 12
               

               
Conread position:
               
71-492
               

               
Cow position:
               
chr20:10209052-10208623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 94
               

               
Conread position:
               
71-500
               

               
Cow position:
               
chr20:4945005-4945432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 153
               

               
Conread position:
               
71-500
               

               
Cow position:
               
chr20:21019803-21019378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 37
               

               
Conread position:
               
71-500
               

               
Cow position:
               
chr20:34202887-34202460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 248
               

               
Conread position:
               
72-241
               

               
Cow position:
               
chr20:38664338-38664165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
14, 156
               

               
Conread position:
               
72-244
               

               
Cow position:
               
chr20:297760-297937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
33, 102
               

               
Conread position:
               
72-248
               

               
Cow position:
               
chr20:25474793-25474619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
76, 26
               

               
Conread position:
               
72-253
               

               
Cow position:
               
chr20:15760324-15760512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 129
               

               
Conread position:
               
72-486
               

               
Cow position:
               
chr20:8578499-8578071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 110
               

               
Conread position:
               
72-499
               

               
Cow position:
               
chr20:3599158-3599576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 83
               

               
Conread position:
               
72-500
               

               
Cow position:
               
chr20:14807127-14806699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
73-226
               

               
Cow position:
               
chr20:41313623-41313475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 68
               

               
Conread position:
               
73-253
               

               
Cow position:
               
chr20:9730247-9730058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
32, 145
               

               
Conread position:
               
73-281
               

               
Cow position:
               
chr20:21291912-21291693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
73-336
               

               
Cow position:
               
chr20:12126058-12126325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 246
               

               
Conread position:
               
73-336
               

               
Cow position:
               
chr20:14620063-14620330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
30, 73
               

               
Conread position:
               
73-393
               

               
Cow position:
               
chr20:35193002-35192700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
30, 66
               

               
Conread position:
               
73-436
               

               
Cow position:
               
chr20:15568720-15569065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
73-468
               

               
Cow position:
               
chr20:34221725-34221319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 112
               

               
Conread position:
               
73-489
               

               
Cow position:
               
chr20:13876466-13876884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 156
               

               
Conread position:
               
73-498
               

               
Cow position:
               
chr20:10884110-10884551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
92, 255
               

               
Conread position:
               
73-500
               

               
Cow position:
               
chr20:22065304-22064883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 67
               

               
Conread position:
               
73-500
               

               
Cow position:
               
chr20:32847586-32847166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 84
               

               
Conread position:
               
74-226
               

               
Cow position:
               
chr20:11661086-11661235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
31, 51
               

               
Conread position:
               
74-306
               

               
Cow position:
               
chr20:15530102-15529869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
81, 157
               

               
Conread position:
               
74-385
               

               
Cow position:
               
chr20:16941040-16941361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 186
               

               
Conread position:
               
74-392
               

               
Cow position:
               
chr20:5009974-5009662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
31, 105
               

               
Conread position:
               
74-420
               

               
Cow position:
               
chr20:18622817-18622479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
31, 191
               

               
Conread position:
               
74-492
               

               
Cow position:
               
chr20:13829502-13829085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 156
               

               
Conread position:
               
74-497
               

               
Cow position:
               
chr20:33532532-33532127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
74-500
               

               
Cow position:
               
chr20:398070-398481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
74-500
               

               
Cow position:
               
chr20:23846423-23846859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 91
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr20:11008413-11008104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 233
               

               
Conread position:
               
77-236
               

               
Cow position:
               
chr20:23879867-23880029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
77-279
               

               
Cow position:
               
chr20:19635939-19636141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
28, 80
               

               
Conread position:
               
77-296
               

               
Cow position:
               
chr20:31148390-31148181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
26, 74
               

               
Conread position:
               
77-301
               

               
Cow position:
               
chr20:5703711-5703484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
77-335
               

               
Cow position:
               
chr20:6372325-6372581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
69, 35
               

               
Conread position:
               
77-431
               

               
Cow position:
               
chr20:17470949-17470620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
314, 29
               

               
Conread position:
               
77-457
               

               
Cow position:
               
chr20:14917510-14917156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 24
               

               
Conread position:
               
77-500
               

               
Cow position:
               
chr20:13493965-13493551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
28, 109
               

               
Conread position:
               
78-248
               

               
Cow position:
               
chr20:34848141-34847972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 75
               

               
Conread position:
               
78-298
               

               
Cow position:
               
chr20:3148919-3148700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 46
               

               
Conread position:
               
78-300
               

               
Cow position:
               
chr20:37919138-37919356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
99, 59
               

               
Conread position:
               
78-492
               

               
Cow position:
               
chr20:5998423-5998843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 32
               

               
Conread position:
               
80-298
               

               
Cow position:
               
chr20:38925613-38925835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 58
               

               
Conread position:
               
80-366
               

               
Cow position:
               
chr20:20898353-20898641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 248
               

               
Conread position:
               
80-432
               

               
Cow position:
               
chr20:38846991-38847350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 227
               

               
Conread position:
               
80-440
               

               
Cow position:
               
chr20:25161895-25162251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
25, 45
               

               
Conread position:
               
82-269
               

               
Cow position:
               
chr20:33076587-33076778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
23, 103
               

               
Conread position:
               
82-377
               

               
Cow position:
               
chr20:23850855-23850559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
83-412
               

               
Cow position:
               
chr20:15822783-15822457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
20, 106
               

               
Conread position:
               
83-415
               

               
Cow position:
               
chr20:34786709-34787041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
22, 150
               

               
Conread position:
               
83-500
               

               
Cow position:
               
chr20:4621108-4621526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 160
               

               
Conread position:
               
83-500
               

               
Cow position:
               
chr20:12420386-12420808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 84
               

               
Conread position:
               
83-500
               

               
Cow position:
               
chr20:14880019-14879600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 68
               

               
Conread position:
               
85-368
               

               
Cow position:
               
chr20:5702953-5702670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
20, 55
               

               
Conread position:
               
86-284
               

               
Cow position:
               
chr20:18488154-18487957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
64, 175
               

               
Conread position:
               
87-331
               

               
Cow position:
               
chr20:16291920-16291678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
18, 211
               

               
Conread position:
               
87-392
               

               
Cow position:
               
chr20:30119363-30119650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
19, 51
               

               
Conread position:
               
87-427
               

               
Cow position:
               
chr20:10188504-10188165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 124
               

               
Conread position:
               
87-455
               

               
Cow position:
               
chr20:9266871-9267243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 43
               

               
Conread position:
               
87-455
               

               
Cow position:
               
chr20:20934505-20934905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
18, 71
               

               
Conread position:
               
87-491
               

               
Cow position:
               
chr20:10177846-10178288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 21
               

               
Conread position:
               
87-500
               

               
Cow position:
               
chr20:13752442-13752053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 51
               

               
Conread position:
               
87-500
               

               
Cow position:
               
chr20:18392028-18392428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 169
               

               
Conread position:
               
88-248
               

               
Cow position:
               
chr20:6849123-6848961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
88-258
               

               
Cow position:
               
chr20:19834603-19834774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
88-498
               

               
Cow position:
               
chr20:7550462-7550056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 143
               

               
Conread position:
               
89-273
               

               
Cow position:
               
chr20:14607686-14607870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
16, 70
               

               
Conread position:
               
89-380
               

               
Cow position:
               
chr20:354671-354961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 155
               

               
Conread position:
               
89-388
               

               
Cow position:
               
chr20:16548045-16548350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 221
               

               
Conread position:
               
89-390
               

               
Cow position:
               
chr20:33976716-33976407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 140
               

               
Conread position:
               
89-419
               

               
Cow position:
               
chr20:33067132-33067475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 284
               

               
Conread position:
               
90-299
               

               
Cow position:
               
chr20:10245833-10246038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
90-386
               

               
Cow position:
               
chr20:12085204-12085495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
58, 18
               

               
Conread position:
               
90-389
               

               
Cow position:
               
chr20:38670992-38670685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 230
               

               
Conread position:
               
91-500
               

               
Cow position:
               
chr20:9433807-9433411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 57
               

               
Conread position:
               
91-500
               

               
Cow position:
               
chr20:30817746-30817350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 112
               

               
Conread position:
               
92-357
               

               
Cow position:
               
chr20:37903887-37904145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 217
               

               
Conread position:
               
93-500
               

               
Cow position:
               
chr20:6424177-6423777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
94-499
               

               
Cow position:
               
chr20:8429961-8429555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
100-500
               

               
Cow position:
               
chr20:7806353-7806749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 200
               

               
Conread position:
               
101-257
               

               
Cow position:
               
chr20:17544839-17544682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
53, 154
               

               
Conread position:
               
101-298
               

               
Cow position:
               
chr20:2742922-2743121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
101-326
               

               
Cow position:
               
chr20:18831668-18831886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
101-499
               

               
Cow position:
               
chr20:34596892-34597294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 42
               

               
Conread position:
               
104-498
               

               
Cow position:
               
chr20:22959136-22959527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 103
               

               
Conread position:
               
106-316
               

               
Cow position:
               
chr20:16405829-16405612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
40, 78
               

               
Conread position:
               
109-403
               

               
Cow position:
               
chr20:10996316-10996020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 98
               

               
Conread position:
               
122-374
               

               
Cow position:
               
chr20:39962769-39962517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
26, 182
               

               
Conread position:
               
122-436
               

               
Cow position:
               
chr20:32463334-32463640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
186, 40
               

               
Conread position:
               
122-456
               

               
Cow position:
               
chr20:22485053-22484721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 129
               

               
Conread position:
               
122-492
               

               
Cow position:
               
chr20:20203405-20203037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 34
               

               
Conread position:
               
124-476
               

               
Cow position:
               
chr20:271231-271586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
41, 202
               

               
Conread position:
               
128-378
               

               
Cow position:
               
chr20:22030505-22030258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 43
               

               
Conread position:
               
129-269
               

               
Cow position:
               
chr20:2148006-2148147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
28, 86
               

               
Conread position:
               
129-500
               

               
Cow position:
               
chr20:21714949-21714565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 26
               

               
Conread position:
               
130-275
               

               
Cow position:
               
chr20:36671249-36671393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
108, 47
               

               
Conread position:
               
130-467
               

               
Cow position:
               
chr20:21761955-21761622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 36
               

               
Conread position:
               
130-483
               

               
Cow position:
               
chr20:3320962-3321308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 33
               

               
Conread position:
               
130-487
               

               
Cow position:
               
chr20:23064649-23065003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 106
               

               
Conread position:
               
130-492
               

               
Cow position:
               
chr20:10818055-10818404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
26, 173
               

               
Conread position:
               
130-500
               

               
Cow position:
               
chr20:20739103-20739476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 127
               

               
Conread position:
               
130-500
               

               
Cow position:
               
chr20:23870635-23871003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 132
               

               
Conread position:
               
130-500
               

               
Cow position:
               
chr20:35365224-35364864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 36
               

               
Conread position:
               
131-385
               

               
Cow position:
               
chr20:21204536-21204290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 23
               

               
Conread position:
               
131-389
               

               
Cow position:
               
chr20:16492258-16491998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 23
               

               
Conread position:
               
131-402
               

               
Cow position:
               
chr20:1205753-1206018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
14, 19
               

               
Conread position:
               
131-451
               

               
Cow position:
               
chr20:311506-311209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
14, 99
               

               
Conread position:
               
131-456
               

               
Cow position:
               
chr20:30648016-30648348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
14, 249
               

               
Conread position:
               
131-499
               

               
Cow position:
               
chr20:25686163-25686538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 141
               

               
Conread position:
               
131-499
               

               
Cow position:
               
chr20:29805474-29805847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 74
               

               
Conread position:
               
132-385
               

               
Cow position:
               
chr20:14564231-14563984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
133-299
               

               
Cow position:
               
chr20:15589224-15589056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
131, 124
               

               
Conread position:
               
133-351
               

               
Cow position:
               
chr20:7709601-7709821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
162, 30
               

               
Conread position:
               
133-368
               

               
Cow position:
               
chr20:10772392-10772151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
20, 95
               

               
Conread position:
               
133-489
               

               
Cow position:
               
chr20:31799022-31799374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 165
               

               
Conread position:
               
133-499
               

               
Cow position:
               
chr20:38578587-38578943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 23
               

               
Conread position:
               
134-431
               

               
Cow position:
               
chr20:40692244-40691942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 187
               

               
Conread position:
               
134-491
               

               
Cow position:
               
chr20:40782140-40781790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 11
               

               
Conread position:
               
135-500
               

               
Cow position:
               
chr20:35797792-35797418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 15
               

               
Conread position:
               
136-313
               

               
Cow position:
               
chr20:35591471-35591650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
91, 96
               

               
Conread position:
               
136-315
               

               
Cow position:
               
chr20:17388708-17388526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
44, 27
               

               
Conread position:
               
136-354
               

               
Cow position:
               
chr20:40158078-40157862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
136-361
               

               
Cow position:
               
chr20:2169545-2169766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
27, 14
               

               
Conread position:
               
136-380
               

               
Cow position:
               
chr20:20056308-20056549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
136, 86
               

               
Conread position:
               
136-414
               

               
Cow position:
               
chr20:33438802-33439079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
222, 162
               

               
Conread position:
               
136-489
               

               
Cow position:
               
chr20:6903494-6903151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
9, 158
               

               
Conread position:
               
136-500
               

               
Cow position:
               
chr20:5827120-5826750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 121
               

               
Conread position:
               
136-500
               

               
Cow position:
               
chr20:39728629-39728261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 73
               

               
Conread position:
               
138-301
               

               
Cow position:
               
chr20:23678539-23678704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
138-451
               

               
Cow position:
               
chr20:40446504-40446191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 28
               

               
Conread position:
               
138-470
               

               
Cow position:
               
chr20:32988656-32988989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 70
               

               
Conread position:
               
138-492
               

               
Cow position:
               
chr20:6890884-6890526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 42
               

               
Conread position:
               
138-500
               

               
Cow position:
               
chr20:19751483-19751122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 168
               

               
Conread position:
               
138-500
               

               
Cow position:
               
chr20:28067248-28067613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 46
               

               
Conread position:
               
139-300
               

               
Cow position:
               
chr20:33820629-33820469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
139-390
               

               
Cow position:
               
chr20:13983528-13983288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
139-480
               

               
Cow position:
               
chr20:14100260-14100605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 106
               

               
Conread position:
               
139-499
               

               
Cow position:
               
chr20:17846133-17845773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 30
               

               
Conread position:
               
141-435
               

               
Cow position:
               
chr20:36633985-36633699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
143-500
               

               
Cow position:
               
chr20:34777351-34776999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 155
               

               
Conread position:
               
143-500
               

               
Cow position:
               
chr20:38768292-38768640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 94
               

               
Conread position:
               
144-447
               

               
Cow position:
               
chr20:8262086-8261782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
39, 33
               

               
Conread position:
               
150-385
               

               
Cow position:
               
chr20:23506309-23506539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
150-500
               

               
Cow position:
               
chr20:580756-581108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 194
               

               
Conread position:
               
151-362
               

               
Cow position:
               
chr20:24902130-24902345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
151-468
               

               
Cow position:
               
chr20:5636644-5636325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 86
               

               
Conread position:
               
153-468
               

               
Cow position:
               
chr20:34085226-34084915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
19, 29
               

               
Conread position:
               
154-330
               

               
Cow position:
               
chr20:34846677-34846849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
155-300
               

               
Cow position:
               
chr20:206492-206635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
155-490
               

               
Cow position:
               
chr20:42458697-42459029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 147
               

               
Conread position:
               
156-290
               

               
Cow position:
               
chr20:28899258-28899118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
156-300
               

               
Cow position:
               
chr20:4002252-4002111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
156-434
               

               
Cow position:
               
chr20:5385585-5385859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
35, 82
               

               
Conread position:
               
156-450
               

               
Cow position:
               
chr20:1576255-1575966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
72, 101
               

               
Conread position:
               
156-499
               

               
Cow position:
               
chr20:34108263-34107930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 124
               

               
Conread position:
               
156-500
               

               
Cow position:
               
chr20:26077240-26076897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 125
               

               
Conread position:
               
156-500
               

               
Cow position:
               
chr20:33144395-33144742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 147
               

               
Conread position:
               
157-311
               

               
Cow position:
               
chr20:41471257-41471104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
157-437
               

               
Cow position:
               
chr20:24834246-24833974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
155, 73
               

               
Conread position:
               
157-483
               

               
Cow position:
               
chr20:31081195-31080874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 103
               

               
Conread position:
               
157-500
               

               
Cow position:
               
chr20:18320637-18320982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 80
               

               
Conread position:
               
157-500
               

               
Cow position:
               
chr20:18530592-18530261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
53, 60
               

               
Conread position:
               
158-319
               

               
Cow position:
               
chr20:361034-361189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
156, 65
               

               
Conread position:
               
158-436
               

               
Cow position:
               
chr20:32661730-32662018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
139, 263
               

               
Conread position:
               
158-441
               

               
Cow position:
               
chr20:4332290-4332014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
47, 139
               

               
Conread position:
               
158-447
               

               
Cow position:
               
chr20:22978483-22978193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
205, 184
               

               
Conread position:
               
158-482
               

               
Cow position:
               
chr20:41627185-41627515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
158-484
               

               
Cow position:
               
chr20:14540499-14540189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
147, 43
               

               
Conread position:
               
158-491
               

               
Cow position:
               
chr20:39415906-39415560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 150
               

               
Conread position:
               
158-492
               

               
Cow position:
               
chr20:19459509-19459826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
69, 74
               

               
Conread position:
               
158-492
               

               
Cow position:
               
chr20:42469915-42469586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 73
               

               
Conread position:
               
158-499
               

               
Cow position:
               
chr20:9412644-9412306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
260, 144
               

               
Conread position:
               
158-499
               

               
Cow position:
               
chr20:9537288-9536948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 65
               

               
Conread position:
               
158-500
               

               
Cow position:
               
chr20:14679773-14679431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
25, 19
               

               
Conread position:
               
158-500
               

               
Cow position:
               
chr20:40127187-40127523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 145
               

               
Conread position:
               
158-500
               

               
Cow position:
               
chr20:40511600-40511945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 121
               

               
Conread position:
               
158-501
               

               
Cow position:
               
chr20:11481979-11482327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 16
               

               
Conread position:
               
158-501
               

               
Cow position:
               
chr20:31323943-31323609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 76
               

               
Conread position:
               
159-461
               

               
Cow position:
               
chr20:11038731-11038455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
268, 18
               

               
Conread position:
               
159-500
               

               
Cow position:
               
chr20:6096340-6096672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 135
               

               
Conread position:
               
159-500
               

               
Cow position:
               
chr20:15565674-15566018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 57
               

               
Conread position:
               
160-405
               

               
Cow position:
               
chr20:26077514-26077745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
161-429
               

               
Cow position:
               
chr20:39266805-39267071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
138, 90
               

               
Conread position:
               
161-500
               

               
Cow position:
               
chr20:35906897-35907234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 139
               

               
Conread position:
               
163-431
               

               
Cow position:
               
chr20:12430650-12430908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
134, 14
               

               
Conread position:
               
163-432
               

               
Cow position:
               
chr20:36040626-36040357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 165
               

               
Conread position:
               
165-457
               

               
Cow position:
               
chr20:42197462-42197183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
256, 97
               

               
Conread position:
               
165-483
               

               
Cow position:
               
chr20:15235901-15235595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
260, 65
               

               
Conread position:
               
166-446
               

               
Cow position:
               
chr20:8098434-8098153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
147, 130
               

               
Conread position:
               
166-483
               

               
Cow position:
               
chr20:21929053-21928734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 132
               

               
Conread position:
               
166-492
               

               
Cow position:
               
chr20:23792752-23792423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
123, 80
               

               
Conread position:
               
167-352
               

               
Cow position:
               
chr20:6358767-6358578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
167-499
               

               
Cow position:
               
chr20:40185527-40185862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
127, 10
               

               
Conread position:
               
168-441
               

               
Cow position:
               
chr20:13658695-13658966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
15, 41
               

               
Conread position:
               
168-491
               

               
Cow position:
               
chr20:13821432-13821764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
16, 38
               

               
Conread position:
               
169-330
               

               
Cow position:
               
chr20:37675692-37675540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
134, 37
               

               
Conread position:
               
170-335
               

               
Cow position:
               
chr20:29084239-29084409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
58, 91
               

               
Conread position:
               
170-413
               

               
Cow position:
               
chr20:22265108-22265341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
171-500
               

               
Cow position:
               
chr20:33363661-33363333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 71
               

               
Conread position:
               
173-424
               

               
Cow position:
               
chr20:19616633-19616379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
174-472
               

               
Cow position:
               
chr20:12566950-12567248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
87, 104
               

               
Conread position:
               
174-486
               

               
Cow position:
               
chr20:11453219-11453528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
121, 31
               

               
Conread position:
               
175-469
               

               
Cow position:
               
chr20:15543758-15544058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
55, 67
               

               
Conread position:
               
176-499
               

               
Cow position:
               
chr20:34918409-34918093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
177-436
               

               
Cow position:
               
chr20:40450159-40449891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
73, 138
               

               
Conread position:
               
178-442
               

               
Cow position:
               
chr20:28955565-28955828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 57
               

               
Conread position:
               
181-447
               

               
Cow position:
               
chr20:20471916-20471662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
127, 26
               

               
Conread position:
               
181-500
               

               
Cow position:
               
chr20:5576908-5576580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
121, 27
               

               
Conread position:
               
183-360
               

               
Cow position:
               
chr20:39613142-39613319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
113, 82
               

               
Conread position:
               
183-404
               

               
Cow position:
               
chr20:17765200-17765420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
181, 67
               

               
Conread position:
               
184-423
               

               
Cow position:
               
chr20:29404044-29404282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
22, 207
               

               
Conread position:
               
184-430
               

               
Cow position:
               
chr20:24000666-24000911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
185-500
               

               
Cow position:
               
chr20:34001261-34001583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 20
               

               
Conread position:
               
189-499
               

               
Cow position:
               
chr20:37165835-37165540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 49
               

               
Conread position:
               
191-299
               

               
Cow position:
               
chr20:23781019-23780911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
193-407
               

               
Cow position:
               
chr20:32974068-32973851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
152, 110
               

               
Conread position:
               
196-498
               

               
Cow position:
               
chr20:22313042-22313342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 131
               

               
Conread position:
               
197-500
               

               
Cow position:
               
chr20:6501911-6501612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
192, 89
               

               
Conread position:
               
198-491
               

               
Cow position:
               
chr20:12441581-12441870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
191, 104
               

               
Conread position:
               
208-432
               

               
Cow position:
               
chr20:13795087-13794874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
208-499
               

               
Cow position:
               
chr20:35009631-35009927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 190
               

               
Conread position:
               
208-500
               

               
Cow position:
               
chr20:16715498-16715213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 87
               

               
Conread position:
               
208-500
               

               
Cow position:
               
chr20:35958754-35958458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 184
               

               
Conread position:
               
211-500
               

               
Cow position:
               
chr20:19146981-19146683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 183
               

               
Conread position:
               
211-500
               

               
Cow position:
               
chr20:40257073-40256783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 92
               

               
Conread position:
               
212-439
               

               
Cow position:
               
chr20:30992244-30992017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
88, 74
               

               
Conread position:
               
212-500
               

               
Cow position:
               
chr20:8606830-8607107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
88, 25
               

               
Conread position:
               
215-414
               

               
Cow position:
               
chr20:23103322-23103123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
52, 177
               

               
Conread position:
               
215-416
               

               
Cow position:
               
chr20:28804669-28804464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
79, 162
               

               
Conread position:
               
215-500
               

               
Cow position:
               
chr20:39019795-39019508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
93, 170
               

               
Conread position:
               
217-420
               

               
Cow position:
               
chr20:34901669-34901466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
82, 175
               

               
Conread position:
               
217-497
               

               
Cow position:
               
chr20:28832069-28831779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 7
               

               
Conread position:
               
217-500
               

               
Cow position:
               
chr20:9473515-9473801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 8
               

               
Conread position:
               
219-500
               

               
Cow position:
               
chr20:14735765-14735489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 79
               

               
Conread position:
               
221-374
               

               
Cow position:
               
chr20:37339009-37338856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
221-470
               

               
Cow position:
               
chr20:10348844-10348593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
6, 21
               

               
Conread position:
               
222-414
               

               
Cow position:
               
chr20:21698486-21698290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
46, 174
               

               
Conread position:
               
226-395
               

               
Cow position:
               
chr20:11498599-11498432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
228-467
               

               
Cow position:
               
chr20:24727449-24727220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
158, 75
               

               
Conread position:
               
228-500
               

               
Cow position:
               
chr20:13967170-13967445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 165
               

               
Conread position:
               
228-500
               

               
Cow position:
               
chr20:39377080-39377332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
231-408
               

               
Cow position:
               
chr20:41174080-41174254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
70, 83
               

               
Conread position:
               
231-475
               

               
Cow position:
               
chr20:282842-283091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
71, 85
               

               
Conread position:
               
231-497
               

               
Cow position:
               
chr20:11864050-11864320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
158, 66
               

               
Conread position:
               
231-500
               

               
Cow position:
               
chr20:30778252-30777989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
159, 65
               

               
Conread position:
               
232-468
               

               
Cow position:
               
chr20:7622980-7623208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
5, 76
               

               
Conread position:
               
232-500
               

               
Cow position:
               
chr20:20202074-20201805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
232-500
               

               
Cow position:
               
chr20:22704377-22704101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 160
               

               
Conread position:
               
237-461
               

               
Cow position:
               
chr20:18500284-18500071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
128, 65
               

               
Conread position:
               
240-497
               

               
Cow position:
               
chr20:34365102-34364851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
14, 100
               

               
Conread position:
               
240-500
               

               
Cow position:
               
chr20:5078274-5078008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
33, 61
               

               
Conread position:
               
241-464
               

               
Cow position:
               
chr20:39247986-39247759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 151
               

               
Conread position:
               
241-489
               

               
Cow position:
               
chr20:10033846-10034104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
59, 126
               

               
Conread position:
               
241-499
               

               
Cow position:
               
chr20:11923173-11923425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
243-436
               

               
Cow position:
               
chr20:27003653-27003852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
52, 156
               

               
Conread position:
               
244-392
               

               
Cow position:
               
chr20:37357678-37357530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
244-436
               

               
Cow position:
               
chr20:4892742-4892941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
244-477
               

               
Cow position:
               
chr20:41403647-41403405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
141, 62
               

               
Conread position:
               
244-492
               

               
Cow position:
               
chr20:17904229-17903981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 57
               

               
Conread position:
               
244-494
               

               
Cow position:
               
chr20:7132420-7132167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
173, 60
               

               
Conread position:
               
244-494
               

               
Cow position:
               
chr20:19312995-19313246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 38
               

               
Conread position:
               
244-500
               

               
Cow position:
               
chr20:18100478-18100232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
144, 51
               

               
Conread position:
               
246-499
               

               
Cow position:
               
chr20:15760881-15761134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 57
               

               
Conread position:
               
246-499
               

               
Cow position:
               
chr20:18185635-18185393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
250-367
               

               
Cow position:
               
chr20:22851274-22851157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
57, 79
               

               
Conread position:
               
250-494
               

               
Cow position:
               
chr20:31069703-31069454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 76
               

               
Conread position:
               
250-501
               

               
Cow position:
               
chr20:24521813-24521563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 52
               

               
Conread position:
               
253-438
               

               
Cow position:
               
chr20:31468901-31469077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 23
               

               
Conread position:
               
255-418
               

               
Cow position:
               
chr20:30938699-30938533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 78
               

               
Conread position:
               
255-491
               

               
Cow position:
               
chr20:34240597-34240347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
255-500
               

               
Cow position:
               
chr20:9379465-9379222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 42
               

               
Conread position:
               
255-501
               

               
Cow position:
               
chr20:31261783-31261544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
256-477
               

               
Cow position:
               
chr20:31077611-31077385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
177, 47
               

               
Conread position:
               
263-383
               

               
Cow position:
               
chr20:41973698-41973818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
263-491
               

               
Cow position:
               
chr20:37272766-37272538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
156, 203
               

               
Conread position:
               
263-499
               

               
Cow position:
               
chr20:3035157-3034908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 62
               

               
Conread position:
               
263-499
               

               
Cow position:
               
chr20:24002367-24002139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
37, 93
               

               
Conread position:
               
266-411
               

               
Cow position:
               
chr20:13267047-13267193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
34, 125
               

               
Conread position:
               
266-489
               

               
Cow position:
               
chr20:15069188-15068968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
164, 37
               

               
Conread position:
               
266-491
               

               
Cow position:
               
chr20:6848679-6848443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 91
               

               
Conread position:
               
266-491
               

               
Cow position:
               
chr20:23936356-23936596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
266-498
               

               
Cow position:
               
chr20:41977476-41977236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
53, 37
               

               
Conread position:
               
266-500
               

               
Cow position:
               
chr20:26469014-26469252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 125
               

               
Conread position:
               
266-500
               

               
Cow position:
               
chr20:29632951-29633178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
267-431
               

               
Cow position:
               
chr20:31845511-31845678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
33, 62
               

               
Conread position:
               
267-498
               

               
Cow position:
               
chr20:32068804-32069042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
160, 124
               

               
Conread position:
               
267-500
               

               
Cow position:
               
chr20:10469113-10468884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
30, 49
               

               
Conread position:
               
268-484
               

               
Cow position:
               
chr20:9988626-9988416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
168, 33
               

               
Conread position:
               
268-498
               

               
Cow position:
               
chr20:3781377-3781611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 124
               

               
Conread position:
               
268-500
               

               
Cow position:
               
chr20:26680170-26679936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
165, 34
               

               
Conread position:
               
268-500
               

               
Cow position:
               
chr20:27340109-27339879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 37
               

               
Conread position:
               
269-500
               

               
Cow position:
               
chr20:14756022-14756255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
164, 32
               

               
Conread position:
               
271-499
               

               
Cow position:
               
chr20:24392022-24391794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
105, 38
               

               
Conread position:
               
271-500
               

               
Cow position:
               
chr20:20312704-20312924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
272-492
               

               
Cow position:
               
chr20:5269020-5269248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
23, 105
               

               
Conread position:
               
273-473
               

               
Cow position:
               
chr20:9701527-9701735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
35, 28
               

               
Conread position:
               
275-466
               

               
Cow position:
               
chr20:41309579-41309383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
29, 130
               

               
Conread position:
               
278-418
               

               
Cow position:
               
chr20:38935196-38935337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 50
               

               
Conread position:
               
278-491
               

               
Cow position:
               
chr20:14614961-14615163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
278-492
               

               
Cow position:
               
chr20:37200398-37200174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 182
               

               
Conread position:
               
282-492
               

               
Cow position:
               
chr20:18399798-18399581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
18, 40
               

               
Conread position:
               
283-497
               

               
Cow position:
               
chr20:19410330-19410553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
26, 122
               

               
Conread position:
               
285-489
               

               
Cow position:
               
chr20:14471514-14471725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
80, 107
               

               
Conread position:
               
287-492
               

               
Cow position:
               
chr20:8020926-8020715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
134, 103
               

               
Conread position:
               
291-472
               

               
Cow position:
               
chr20:18837132-18837320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
142, 99
               

               
Conread position:
               
292-500
               

               
Cow position:
               
chr20:33177212-33176995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
92, 11
               

               
Conread position:
               
293-500
               

               
Cow position:
               
chr20:10539338-10539134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
149, 13
               

               
Conread position:
               
300-500
               

               
Cow position:
               
chr20:15582023-15582223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
89, 21
               

               
Conread position:
               
303-436
               

               
Cow position:
               
chr20:22722036-22721902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
118, 88
               

               
Conread position:
               
303-500
               

               
Cow position:
               
chr20:12334388-12334195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
26, 89
               

               
Conread position:
               
304-436
               

               
Cow position:
               
chr20:361307-361440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
304-500
               

               
Cow position:
               
chr20:23679136-23679333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
115, 82
               

               
Conread position:
               
305-474
               

               
Cow position:
               
chr20:12048404-12048235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
133, 46
               

               
Conread position:
               
308-492
               

               
Cow position:
               
chr20:17363679-17363871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
62, 88
               

               
Conread position:
               
322-500
               

               
Cow position:
               
chr20:5025311-5025489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
68, 111
               

               
Conread position:
               
328-500
               

               
Cow position:
               
chr20:38414982-38415158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
72, 63
               

               
Conread position:
               
330-489
               

               
Cow position:
               
chr20:41119897-41119739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
103, 60
               

               
Conread position:
               
330-500
               

               
Cow position:
               
chr20:11043517-11043683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
341-443
               

               
Cow position:
               
chr20:5633382-5633484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
344-457
               

               
Cow position:
               
chr20:9730057-9729941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
88, 39
               

               
Conread position:
               
348-500
               

               
Cow position:
               
chr20:4781533-4781375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
85, 42
               

               
Conread position:
               
349-492
               

               
Cow position:
               
chr20:5116335-5116484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
84, 41
               

               
Conread position:
               
350-492
               

               
Cow position:
               
chr20:24902497-24902650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
87, 39
               

               
Conread position:
               
361-500
               

               
Cow position:
               
chr20:39376129-39375996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               
Show alignments to all cow chromosomes.