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Cow genome map

           
Conread name:
           
Utr2-C0001811_G15
        

               
Conread position:
               
2-270
               

               
Cow position:
               
chr27:4414129-4413863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
63, 29
               

               
Conread position:
               
11-258
               

               
Cow position:
               
chr27:28178010-28177778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
12-361
               

               
Cow position:
               
chr27:26852882-26852547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 25
               

               
Conread position:
               
13-457
               

               
Cow position:
               
chr27:26481501-26481074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 23
               

               
Conread position:
               
14-355
               

               
Cow position:
               
chr27:13869320-13869663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
17-247
               

               
Cow position:
               
chr27:11940545-11940294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
18-500
               

               
Cow position:
               
chr27:16478625-16478162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
11, 45
               

               
Conread position:
               
19-384
               

               
Cow position:
               
chr27:26112211-26111841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 17
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr27:18873751-18873971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
20-499
               

               
Cow position:
               
chr27:1353281-1353770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
20-500
               

               
Cow position:
               
chr27:6499757-6500251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
22-298
               

               
Cow position:
               
chr27:23147869-23148149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
48, 23
               

               
Conread position:
               
24-245
               

               
Cow position:
               
chr27:29246436-29246216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
214, 14
               

               
Conread position:
               
26-487
               

               
Cow position:
               
chr27:6159704-6160155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
117, 22
               

               
Conread position:
               
28-499
               

               
Cow position:
               
chr27:8571321-8570850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
76, 10
               

               
Conread position:
               
30-499
               

               
Cow position:
               
chr27:15315240-15315679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 13
               

               
Conread position:
               
31-273
               

               
Cow position:
               
chr27:26401008-26400763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
36, 113
               

               
Conread position:
               
32-258
               

               
Cow position:
               
chr27:21341315-21341548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
32-300
               

               
Cow position:
               
chr27:23863314-23863574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
113, 7
               

               
Conread position:
               
33-365
               

               
Cow position:
               
chr27:15865331-15865660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 13
               

               
Conread position:
               
35-232
               

               
Cow position:
               
chr27:29877752-29877555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
35-499
               

               
Cow position:
               
chr27:24739078-24738616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
66, 27
               

               
Conread position:
               
36-196
               

               
Cow position:
               
chr27:20055745-20055901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
36-499
               

               
Cow position:
               
chr27:26509434-26508972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 29
               

               
Conread position:
               
36-500
               

               
Cow position:
               
chr27:15867115-15867577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
37-271
               

               
Cow position:
               
chr27:21419457-21419235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
38-199
               

               
Cow position:
               
chr27:24952224-24952070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
67, 25
               

               
Conread position:
               
38-248
               

               
Cow position:
               
chr27:25382414-25382218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
38-368
               

               
Cow position:
               
chr27:23859883-23860221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 39
               

               
Conread position:
               
38-500
               

               
Cow position:
               
chr27:15870882-15871348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 18
               

               
Conread position:
               
39-252
               

               
Cow position:
               
chr27:9504272-9504495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
39-258
               

               
Cow position:
               
chr27:26314404-26314180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
39-300
               

               
Cow position:
               
chr27:26245824-26245564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
63, 203
               

               
Conread position:
               
39-300
               

               
Cow position:
               
chr27:29991739-29991462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
39-387
               

               
Cow position:
               
chr27:15240779-15241133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
15, 64
               

               
Conread position:
               
39-436
               

               
Cow position:
               
chr27:16965293-16965706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 105
               

               
Conread position:
               
39-441
               

               
Cow position:
               
chr27:19500517-19500113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 270
               

               
Conread position:
               
39-485
               

               
Cow position:
               
chr27:25428188-25427737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
9, 289
               

               
Conread position:
               
39-492
               

               
Cow position:
               
chr27:12515919-12516377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 31
               

               
Conread position:
               
40-235
               

               
Cow position:
               
chr27:22583469-22583667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 37
               

               
Conread position:
               
40-273
               

               
Cow position:
               
chr27:19576603-19576365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
24, 130
               

               
Conread position:
               
40-361
               

               
Cow position:
               
chr27:23560304-23559987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
46, 23
               

               
Conread position:
               
40-492
               

               
Cow position:
               
chr27:22220273-22220732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 352
               

               
Conread position:
               
40-500
               

               
Cow position:
               
chr27:16284204-16284659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 105
               

               
Conread position:
               
40-500
               

               
Cow position:
               
chr27:20354324-20354766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 31
               

               
Conread position:
               
41-489
               

               
Cow position:
               
chr27:21978416-21977962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
41-491
               

               
Cow position:
               
chr27:13875454-13875912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 161
               

               
Conread position:
               
42-443
               

               
Cow position:
               
chr27:27442435-27442045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
43-243
               

               
Cow position:
               
chr27:19991876-19992082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
60, 35
               

               
Conread position:
               
43-499
               

               
Cow position:
               
chr27:22547659-22547219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
45-491
               

               
Cow position:
               
chr27:29831977-29831509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
46-258
               

               
Cow position:
               
chr27:6282561-6282777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
46-268
               

               
Cow position:
               
chr27:28253969-28254191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
56, 22
               

               
Conread position:
               
46-301
               

               
Cow position:
               
chr27:24007194-24007455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
46-477
               

               
Cow position:
               
chr27:4944775-4944365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 33
               

               
Conread position:
               
47-347
               

               
Cow position:
               
chr27:6290203-6290503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
25, 240
               

               
Conread position:
               
48-341
               

               
Cow position:
               
chr27:2886106-2885807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
54, 15
               

               
Conread position:
               
48-355
               

               
Cow position:
               
chr27:212681-213003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
32, 221
               

               
Conread position:
               
48-485
               

               
Cow position:
               
chr27:13841093-13841548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 333
               

               
Conread position:
               
48-492
               

               
Cow position:
               
chr27:30374853-30374392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
30, 268
               

               
Conread position:
               
48-499
               

               
Cow position:
               
chr27:17397720-17397261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
48-500
               

               
Cow position:
               
chr27:15865964-15866410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 17
               

               
Conread position:
               
49-199
               

               
Cow position:
               
chr27:29458061-29458216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
49-218
               

               
Cow position:
               
chr27:27012429-27012602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
52, 22
               

               
Conread position:
               
49-250
               

               
Cow position:
               
chr27:22748060-22748263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
54, 120
               

               
Conread position:
               
49-254
               

               
Cow position:
               
chr27:21201922-21202132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
49-282
               

               
Cow position:
               
chr27:27648586-27648350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
19, 104
               

               
Conread position:
               
49-299
               

               
Cow position:
               
chr27:26173231-26173481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
55, 16
               

               
Conread position:
               
49-300
               

               
Cow position:
               
chr27:19607930-19607674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 199
               

               
Conread position:
               
49-301
               

               
Cow position:
               
chr27:7304876-7304618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
19, 144
               

               
Conread position:
               
49-306
               

               
Cow position:
               
chr27:26565526-26565780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
21, 153
               

               
Conread position:
               
49-329
               

               
Cow position:
               
chr27:5545312-5545595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
55, 180
               

               
Conread position:
               
49-353
               

               
Cow position:
               
chr27:20719017-20719328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
49-355
               

               
Cow position:
               
chr27:13940819-13940520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 61
               

               
Conread position:
               
49-381
               

               
Cow position:
               
chr27:29593893-29593568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 17
               

               
Conread position:
               
49-440
               

               
Cow position:
               
chr27:426703-427091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 28
               

               
Conread position:
               
49-473
               

               
Cow position:
               
chr27:11480904-11480470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 30
               

               
Conread position:
               
49-489
               

               
Cow position:
               
chr27:6787678-6788134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 129
               

               
Conread position:
               
49-489
               

               
Cow position:
               
chr27:27003526-27003106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 43
               

               
Conread position:
               
49-499
               

               
Cow position:
               
chr27:22427104-22426642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 250
               

               
Conread position:
               
49-500
               

               
Cow position:
               
chr27:6550196-6550637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 23
               

               
Conread position:
               
49-500
               

               
Cow position:
               
chr27:13639257-13638806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 253
               

               
Conread position:
               
49-500
               

               
Cow position:
               
chr27:23918302-23917868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
53, 111
               

               
Conread position:
               
50-284
               

               
Cow position:
               
chr27:20653525-20653286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
50-302
               

               
Cow position:
               
chr27:31169373-31169123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 116
               

               
Conread position:
               
50-308
               

               
Cow position:
               
chr27:24303675-24303939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 233
               

               
Conread position:
               
50-337
               

               
Cow position:
               
chr27:11561508-11561797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 255
               

               
Conread position:
               
50-499
               

               
Cow position:
               
chr27:13251768-13252195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 14
               

               
Conread position:
               
50-500
               

               
Cow position:
               
chr27:19496613-19497061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
54, 27
               

               
Conread position:
               
50-500
               

               
Cow position:
               
chr27:30582474-30582924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 29
               

               
Conread position:
               
51-198
               

               
Cow position:
               
chr27:6660841-6660987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 14
               

               
Conread position:
               
51-248
               

               
Cow position:
               
chr27:14169145-14169333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
51-251
               

               
Cow position:
               
chr27:4544618-4544412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 127
               

               
Conread position:
               
51-258
               

               
Cow position:
               
chr27:18791779-18791566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
51-384
               

               
Cow position:
               
chr27:20514558-20514889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 51
               

               
Conread position:
               
51-464
               

               
Cow position:
               
chr27:16103548-16103953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
51-500
               

               
Cow position:
               
chr27:17472550-17472999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 19
               

               
Conread position:
               
52-246
               

               
Cow position:
               
chr27:23232648-23232847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
53, 26
               

               
Conread position:
               
52-301
               

               
Cow position:
               
chr27:10323578-10323823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
23, 85
               

               
Conread position:
               
52-302
               

               
Cow position:
               
chr27:26121492-26121747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
52-346
               

               
Cow position:
               
chr27:18020421-18020132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
208, 13
               

               
Conread position:
               
52-498
               

               
Cow position:
               
chr27:22035636-22035189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 104
               

               
Conread position:
               
52-500
               

               
Cow position:
               
chr27:20828971-20828521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 87
               

               
Conread position:
               
53-248
               

               
Cow position:
               
chr27:7847459-7847654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
18, 55
               

               
Conread position:
               
53-262
               

               
Cow position:
               
chr27:26317805-26318015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
104, 14
               

               
Conread position:
               
53-321
               

               
Cow position:
               
chr27:26883522-26883255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
52, 18
               

               
Conread position:
               
53-481
               

               
Cow position:
               
chr27:20749265-20748858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 10
               

               
Conread position:
               
53-500
               

               
Cow position:
               
chr27:26218466-26218885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 11
               

               
Conread position:
               
54-253
               

               
Cow position:
               
chr27:24559841-24559637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 57
               

               
Conread position:
               
54-441
               

               
Cow position:
               
chr27:21990878-21991276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
7, 183
               

               
Conread position:
               
55-326
               

               
Cow position:
               
chr27:28478322-28478592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
56-300
               

               
Cow position:
               
chr27:20501577-20501826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
109, 16
               

               
Conread position:
               
56-440
               

               
Cow position:
               
chr27:17331234-17331621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
56-491
               

               
Cow position:
               
chr27:7851124-7851554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 155
               

               
Conread position:
               
56-492
               

               
Cow position:
               
chr27:24446396-24445978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
46, 16
               

               
Conread position:
               
56-499
               

               
Cow position:
               
chr27:27856081-27856519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
56-500
               

               
Cow position:
               
chr27:16704991-16705433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 89
               

               
Conread position:
               
56-500
               

               
Cow position:
               
chr27:30407308-30406845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 131
               

               
Conread position:
               
57-226
               

               
Cow position:
               
chr27:23760240-23760070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
11, 85
               

               
Conread position:
               
57-248
               

               
Cow position:
               
chr27:21951240-21951045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
57-249
               

               
Cow position:
               
chr27:21101553-21101352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
57-257
               

               
Cow position:
               
chr27:22792579-22792774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
48, 94
               

               
Conread position:
               
57-296
               

               
Cow position:
               
chr27:14817971-14818214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
48, 28
               

               
Conread position:
               
57-312
               

               
Cow position:
               
chr27:30483565-30483300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
57-338
               

               
Cow position:
               
chr27:27558765-27558476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
23, 8
               

               
Conread position:
               
57-348
               

               
Cow position:
               
chr27:19932804-19933097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 210
               

               
Conread position:
               
57-360
               

               
Cow position:
               
chr27:1190739-1190431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
33, 235
               

               
Conread position:
               
57-389
               

               
Cow position:
               
chr27:6924823-6925162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 10
               

               
Conread position:
               
57-433
               

               
Cow position:
               
chr27:26226545-26226175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
57-480
               

               
Cow position:
               
chr27:26807808-26807397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 44
               

               
Conread position:
               
57-497
               

               
Cow position:
               
chr27:8062613-8062173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 128
               

               
Conread position:
               
57-500
               

               
Cow position:
               
chr27:15669034-15668580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 338
               

               
Conread position:
               
57-500
               

               
Cow position:
               
chr27:23632350-23632786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 21
               

               
Conread position:
               
57-500
               

               
Cow position:
               
chr27:26163144-26163564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
46, 210
               

               
Conread position:
               
58-213
               

               
Cow position:
               
chr27:30441444-30441603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
47, 7
               

               
Conread position:
               
58-220
               

               
Cow position:
               
chr27:18868064-18867909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
11, 51
               

               
Conread position:
               
58-226
               

               
Cow position:
               
chr27:19074281-19074111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
58-257
               

               
Cow position:
               
chr27:29249328-29249534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
58-272
               

               
Cow position:
               
chr27:18752589-18752810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
44, 7
               

               
Conread position:
               
58-346
               

               
Cow position:
               
chr27:12658612-12658316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
47, 237
               

               
Conread position:
               
58-347
               

               
Cow position:
               
chr27:26794042-26793757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
46, 19
               

               
Conread position:
               
58-409
               

               
Cow position:
               
chr27:16088532-16088907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 142
               

               
Conread position:
               
58-412
               

               
Cow position:
               
chr27:23510718-23511084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
47, 21
               

               
Conread position:
               
58-432
               

               
Cow position:
               
chr27:17995198-17994828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 13
               

               
Conread position:
               
58-485
               

               
Cow position:
               
chr27:15409286-15408872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 91
               

               
Conread position:
               
58-491
               

               
Cow position:
               
chr27:4390516-4390077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 113
               

               
Conread position:
               
58-491
               

               
Cow position:
               
chr27:27020354-27019923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 50
               

               
Conread position:
               
58-498
               

               
Cow position:
               
chr27:15453956-15454396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 21
               

               
Conread position:
               
58-500
               

               
Cow position:
               
chr27:15925090-15925521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 7
               

               
Conread position:
               
59-241
               

               
Cow position:
               
chr27:11145624-11145805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 107
               

               
Conread position:
               
59-473
               

               
Cow position:
               
chr27:8168680-8168277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
60-314
               

               
Cow position:
               
chr27:27058661-27058407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
60-343
               

               
Cow position:
               
chr27:12564685-12564396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
60-461
               

               
Cow position:
               
chr27:23545594-23545181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 18
               

               
Conread position:
               
62-313
               

               
Cow position:
               
chr27:19681693-19681951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
63-462
               

               
Cow position:
               
chr27:27460832-27460423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
39, 158
               

               
Conread position:
               
65-191
               

               
Cow position:
               
chr27:28472945-28472814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
65-238
               

               
Cow position:
               
chr27:10581284-10581456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
65-261
               

               
Cow position:
               
chr27:6679629-6679428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
65-299
               

               
Cow position:
               
chr27:6106454-6106684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
15, 100
               

               
Conread position:
               
65-338
               

               
Cow position:
               
chr27:31248858-31248594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
40, 90
               

               
Conread position:
               
65-412
               

               
Cow position:
               
chr27:28896626-28896969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 185
               

               
Conread position:
               
65-478
               

               
Cow position:
               
chr27:8630126-8629707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
20, 63
               

               
Conread position:
               
65-500
               

               
Cow position:
               
chr27:18558105-18558550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 178
               

               
Conread position:
               
65-500
               

               
Cow position:
               
chr27:20553028-20552583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 54
               

               
Conread position:
               
65-500
               

               
Cow position:
               
chr27:30914754-30915188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 183
               

               
Conread position:
               
66-258
               

               
Cow position:
               
chr27:13181652-13181854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
14, 119
               

               
Conread position:
               
66-300
               

               
Cow position:
               
chr27:8790994-8790755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
14, 64
               

               
Conread position:
               
66-427
               

               
Cow position:
               
chr27:29380610-29380967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 64
               

               
Conread position:
               
66-435
               

               
Cow position:
               
chr27:20078614-20078982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 176
               

               
Conread position:
               
66-490
               

               
Cow position:
               
chr27:23929726-23930141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 85
               

               
Conread position:
               
67-213
               

               
Cow position:
               
chr27:30458879-30458732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
90, 32
               

               
Conread position:
               
67-227
               

               
Cow position:
               
chr27:26154067-26154233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
67-244
               

               
Cow position:
               
chr27:10279960-10280129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
92, 41
               

               
Conread position:
               
67-248
               

               
Cow position:
               
chr27:20081381-20081196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
32, 112
               

               
Conread position:
               
67-254
               

               
Cow position:
               
chr27:18491317-18491495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
67-254
               

               
Cow position:
               
chr27:20266475-20266286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
67-255
               

               
Cow position:
               
chr27:27828106-27827910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
67-268
               

               
Cow position:
               
chr27:13801555-13801762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
38, 56
               

               
Conread position:
               
67-268
               

               
Cow position:
               
chr27:26236082-26236279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
67-269
               

               
Cow position:
               
chr27:18688660-18688455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
67-278
               

               
Cow position:
               
chr27:24223704-24223915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
8, 97
               

               
Conread position:
               
67-278
               

               
Cow position:
               
chr27:27450133-27449924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 84
               

               
Conread position:
               
67-282
               

               
Cow position:
               
chr27:6162653-6162443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
35, 84
               

               
Conread position:
               
67-282
               

               
Cow position:
               
chr27:26323192-26323415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 188
               

               
Conread position:
               
67-287
               

               
Cow position:
               
chr27:20548560-20548783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
67-290
               

               
Cow position:
               
chr27:672414-672630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
35, 144
               

               
Conread position:
               
67-298
               

               
Cow position:
               
chr27:31170322-31170081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
37, 171
               

               
Conread position:
               
67-329
               

               
Cow position:
               
chr27:26437370-26437105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 93
               

               
Conread position:
               
67-347
               

               
Cow position:
               
chr27:10436978-10436699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 69
               

               
Conread position:
               
67-352
               

               
Cow position:
               
chr27:14269580-14269306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
36, 126
               

               
Conread position:
               
67-380
               

               
Cow position:
               
chr27:27405318-27405005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
38, 14
               

               
Conread position:
               
67-396
               

               
Cow position:
               
chr27:591018-590687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
38, 16
               

               
Conread position:
               
67-419
               

               
Cow position:
               
chr27:31452092-31452433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
38, 224
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr27:20101117-20101485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
38, 249
               

               
Conread position:
               
67-468
               

               
Cow position:
               
chr27:22513931-22513520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 237
               

               
Conread position:
               
67-475
               

               
Cow position:
               
chr27:19896516-19896918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
366, 85
               

               
Conread position:
               
67-476
               

               
Cow position:
               
chr27:30872307-30871897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 70
               

               
Conread position:
               
67-477
               

               
Cow position:
               
chr27:27438758-27438341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 166
               

               
Conread position:
               
67-482
               

               
Cow position:
               
chr27:29185095-29184674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 245
               

               
Conread position:
               
67-491
               

               
Cow position:
               
chr27:6541385-6541802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 89
               

               
Conread position:
               
67-491
               

               
Cow position:
               
chr27:18031320-18030879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 89
               

               
Conread position:
               
67-492
               

               
Cow position:
               
chr27:19387771-19388197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 90
               

               
Conread position:
               
67-492
               

               
Cow position:
               
chr27:31147952-31147495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 14
               

               
Conread position:
               
67-495
               

               
Cow position:
               
chr27:11435577-11435147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 139
               

               
Conread position:
               
67-499
               

               
Cow position:
               
chr27:13842954-13843392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 10
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr27:2930841-2930410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 236
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr27:23128215-23128641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 149
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr27:28018071-28018523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr27:28190441-28190031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 78
               

               
Conread position:
               
68-274
               

               
Cow position:
               
chr27:20484484-20484687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 88
               

               
Conread position:
               
68-297
               

               
Cow position:
               
chr27:29388424-29388653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
68-300
               

               
Cow position:
               
chr27:16512415-16512186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
33, 10
               

               
Conread position:
               
68-301
               

               
Cow position:
               
chr27:29319155-29319397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
12, 112
               

               
Conread position:
               
68-303
               

               
Cow position:
               
chr27:22401234-22401477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
68-329
               

               
Cow position:
               
chr27:11982897-11982635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 143
               

               
Conread position:
               
68-424
               

               
Cow position:
               
chr27:23594071-23594422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
30, 9
               

               
Conread position:
               
68-443
               

               
Cow position:
               
chr27:29236309-29236705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 346
               

               
Conread position:
               
68-471
               

               
Cow position:
               
chr27:14343684-14343310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
37, 49
               

               
Conread position:
               
68-475
               

               
Cow position:
               
chr27:29431226-29431622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
6, 83
               

               
Conread position:
               
68-500
               

               
Cow position:
               
chr27:2957168-2957594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 85
               

               
Conread position:
               
68-500
               

               
Cow position:
               
chr27:8962489-8962083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
68-501
               

               
Cow position:
               
chr27:7935408-7934976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 11
               

               
Conread position:
               
69-241
               

               
Cow position:
               
chr27:2036478-2036646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
69-244
               

               
Cow position:
               
chr27:31153803-31153628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
138, 88
               

               
Conread position:
               
69-245
               

               
Cow position:
               
chr27:25790054-25790227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 75
               

               
Conread position:
               
69-256
               

               
Cow position:
               
chr27:13236688-13236493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
69-262
               

               
Cow position:
               
chr27:26980213-26980014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
69-299
               

               
Cow position:
               
chr27:27740540-27740307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 8
               

               
Conread position:
               
69-362
               

               
Cow position:
               
chr27:20584714-20584412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
36, 9
               

               
Conread position:
               
69-486
               

               
Cow position:
               
chr27:7971313-7971742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
36, 131
               

               
Conread position:
               
69-488
               

               
Cow position:
               
chr27:16786583-16787001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 78
               

               
Conread position:
               
69-492
               

               
Cow position:
               
chr27:30868999-30868560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 246
               

               
Conread position:
               
69-498
               

               
Cow position:
               
chr27:28922143-28921712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 198
               

               
Conread position:
               
69-499
               

               
Cow position:
               
chr27:14670627-14670195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 8
               

               
Conread position:
               
69-500
               

               
Cow position:
               
chr27:10979612-10980050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 257
               

               
Conread position:
               
69-500
               

               
Cow position:
               
chr27:28206556-28206984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 87
               

               
Conread position:
               
70-236
               

               
Cow position:
               
chr27:15434086-15434246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
70-331
               

               
Cow position:
               
chr27:19508765-19509030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
70-478
               

               
Cow position:
               
chr27:24477180-24477581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 8
               

               
Conread position:
               
70-500
               

               
Cow position:
               
chr27:1768864-1768449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 35
               

               
Conread position:
               
71-208
               

               
Cow position:
               
chr27:6751932-6752074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
71-248
               

               
Cow position:
               
chr27:26983917-26984095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
31, 69
               

               
Conread position:
               
71-258
               

               
Cow position:
               
chr27:20048391-20048577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
35, 85
               

               
Conread position:
               
71-260
               

               
Cow position:
               
chr27:11208803-11208609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
71-300
               

               
Cow position:
               
chr27:31386876-31386645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
38, 94
               

               
Conread position:
               
71-355
               

               
Cow position:
               
chr27:5553226-5553510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 50
               

               
Conread position:
               
71-355
               

               
Cow position:
               
chr27:29613733-29613449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
86, 26
               

               
Conread position:
               
71-438
               

               
Cow position:
               
chr27:11151426-11151797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
34, 10
               

               
Conread position:
               
71-486
               

               
Cow position:
               
chr27:27554925-27554514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
71-491
               

               
Cow position:
               
chr27:18543743-18544175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 7
               

               
Conread position:
               
71-492
               

               
Cow position:
               
chr27:28932048-28931609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
71-500
               

               
Cow position:
               
chr27:2592291-2592728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 332
               

               
Conread position:
               
72-205
               

               
Cow position:
               
chr27:31443811-31443946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
72-256
               

               
Cow position:
               
chr27:31515798-31515608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
72-287
               

               
Cow position:
               
chr27:20612276-20612494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 171
               

               
Conread position:
               
72-290
               

               
Cow position:
               
chr27:26118252-26118473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
33, 195
               

               
Conread position:
               
72-299
               

               
Cow position:
               
chr27:9977441-9977669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
32, 81
               

               
Conread position:
               
72-302
               

               
Cow position:
               
chr27:18435375-18435145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
32, 84
               

               
Conread position:
               
72-319
               

               
Cow position:
               
chr27:22245397-22245629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
32, 11
               

               
Conread position:
               
72-437
               

               
Cow position:
               
chr27:7649836-7649469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
72-479
               

               
Cow position:
               
chr27:19589238-19589641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
150, 56
               

               
Conread position:
               
72-498
               

               
Cow position:
               
chr27:7412148-7412567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 95
               

               
Conread position:
               
72-500
               

               
Cow position:
               
chr27:20283399-20283818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 70
               

               
Conread position:
               
72-500
               

               
Cow position:
               
chr27:22439892-22440326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 83
               

               
Conread position:
               
72-500
               

               
Cow position:
               
chr27:24228049-24227607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 237
               

               
Conread position:
               
72-500
               

               
Cow position:
               
chr27:25809761-25809336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 52
               

               
Conread position:
               
72-500
               

               
Cow position:
               
chr27:26643458-26643859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
233, 33
               

               
Conread position:
               
72-500
               

               
Cow position:
               
chr27:26984109-26984528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
72-500
               

               
Cow position:
               
chr27:30764789-30765218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 7
               

               
Conread position:
               
72-500
               

               
Cow position:
               
chr27:30814172-30814591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 53
               

               
Conread position:
               
73-219
               

               
Cow position:
               
chr27:21054213-21054364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
73-243
               

               
Cow position:
               
chr27:19779633-19779806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
29, 66
               

               
Conread position:
               
73-248
               

               
Cow position:
               
chr27:17908501-17908326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 24
               

               
Conread position:
               
73-258
               

               
Cow position:
               
chr27:28015979-28015792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
31, 169
               

               
Conread position:
               
73-298
               

               
Cow position:
               
chr27:10404361-10404133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
32, 177
               

               
Conread position:
               
73-441
               

               
Cow position:
               
chr27:3306542-3306893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 64
               

               
Conread position:
               
73-475
               

               
Cow position:
               
chr27:19669049-19668627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 136
               

               
Conread position:
               
73-492
               

               
Cow position:
               
chr27:28518052-28518464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 16
               

               
Conread position:
               
73-500
               

               
Cow position:
               
chr27:22550014-22549594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
28, 219
               

               
Conread position:
               
73-500
               

               
Cow position:
               
chr27:28002047-28001632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 77
               

               
Conread position:
               
74-223
               

               
Cow position:
               
chr27:20561345-20561490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 79
               

               
Conread position:
               
74-231
               

               
Cow position:
               
chr27:178620-178780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 93
               

               
Conread position:
               
74-231
               

               
Cow position:
               
chr27:16505149-16504994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 62
               

               
Conread position:
               
74-297
               

               
Cow position:
               
chr27:7343671-7343446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
28, 105
               

               
Conread position:
               
74-306
               

               
Cow position:
               
chr27:15003222-15002987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
74-414
               

               
Cow position:
               
chr27:23735727-23736058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
74-456
               

               
Cow position:
               
chr27:16275923-16275536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
31, 295
               

               
Conread position:
               
74-457
               

               
Cow position:
               
chr27:29816872-29816478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 52
               

               
Conread position:
               
74-492
               

               
Cow position:
               
chr27:10307546-10307117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 172
               

               
Conread position:
               
74-492
               

               
Cow position:
               
chr27:27389270-27388850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 303
               

               
Conread position:
               
74-499
               

               
Cow position:
               
chr27:1637169-1636756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 76
               

               
Conread position:
               
74-500
               

               
Cow position:
               
chr27:31373215-31372793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 138
               

               
Conread position:
               
76-500
               

               
Cow position:
               
chr27:2901506-2901055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
29, 43
               

               
Conread position:
               
77-211
               

               
Cow position:
               
chr27:26467801-26467662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
77-219
               

               
Cow position:
               
chr27:18215399-18215260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
77-254
               

               
Cow position:
               
chr27:31157785-31157969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
27, 54
               

               
Conread position:
               
77-268
               

               
Cow position:
               
chr27:29308103-29308294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
77-296
               

               
Cow position:
               
chr27:13255033-13254816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
39, 56
               

               
Conread position:
               
77-381
               

               
Cow position:
               
chr27:12459048-12459344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
28, 163
               

               
Conread position:
               
77-476
               

               
Cow position:
               
chr27:20045656-20046040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 28
               

               
Conread position:
               
77-489
               

               
Cow position:
               
chr27:26224496-26224093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
27, 50
               

               
Conread position:
               
77-492
               

               
Cow position:
               
chr27:24331474-24331904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 192
               

               
Conread position:
               
77-499
               

               
Cow position:
               
chr27:19717658-19718109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 172
               

               
Conread position:
               
77-500
               

               
Cow position:
               
chr27:299614-299197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
78-270
               

               
Cow position:
               
chr27:5539931-5539740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
27, 78
               

               
Conread position:
               
78-336
               

               
Cow position:
               
chr27:25151850-25152102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
27, 127
               

               
Conread position:
               
78-486
               

               
Cow position:
               
chr27:15204475-15204059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
26, 257
               

               
Conread position:
               
78-489
               

               
Cow position:
               
chr27:19546760-19546327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 172
               

               
Conread position:
               
78-489
               

               
Cow position:
               
chr27:24225138-24224732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
78-499
               

               
Cow position:
               
chr27:12596543-12596944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 62
               

               
Conread position:
               
78-500
               

               
Cow position:
               
chr27:18507406-18507818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 227
               

               
Conread position:
               
79-390
               

               
Cow position:
               
chr27:29693229-29693536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
24, 227
               

               
Conread position:
               
80-300
               

               
Cow position:
               
chr27:30455756-30455979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
25, 62
               

               
Conread position:
               
80-489
               

               
Cow position:
               
chr27:22602938-22603338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 168
               

               
Conread position:
               
80-501
               

               
Cow position:
               
chr27:26428365-26427941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 90
               

               
Conread position:
               
81-288
               

               
Cow position:
               
chr27:29160220-29160013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
23, 164
               

               
Conread position:
               
82-461
               

               
Cow position:
               
chr27:4858854-4858502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
23, 64
               

               
Conread position:
               
83-268
               

               
Cow position:
               
chr27:1184407-1184224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
83-363
               

               
Cow position:
               
chr27:23108136-23107854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
22, 174
               

               
Conread position:
               
83-443
               

               
Cow position:
               
chr27:2644332-2643968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
19, 225
               

               
Conread position:
               
85-226
               

               
Cow position:
               
chr27:26624975-26625120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
86-416
               

               
Cow position:
               
chr27:26188596-26188919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 157
               

               
Conread position:
               
86-500
               

               
Cow position:
               
chr27:13318208-13317768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 324
               

               
Conread position:
               
87-247
               

               
Cow position:
               
chr27:23177542-23177380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 79
               

               
Conread position:
               
87-248
               

               
Cow position:
               
chr27:22254560-22254728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 161
               

               
Conread position:
               
87-254
               

               
Cow position:
               
chr27:30997059-30996889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 38
               

               
Conread position:
               
87-260
               

               
Cow position:
               
chr27:26909818-26909646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
18, 53
               

               
Conread position:
               
87-267
               

               
Cow position:
               
chr27:232321-232506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
87-282
               

               
Cow position:
               
chr27:19452769-19452969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
87-300
               

               
Cow position:
               
chr27:6319693-6319904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 66
               

               
Conread position:
               
87-345
               

               
Cow position:
               
chr27:11994097-11993835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
18, 33
               

               
Conread position:
               
87-393
               

               
Cow position:
               
chr27:22489042-22489355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
18, 235
               

               
Conread position:
               
87-414
               

               
Cow position:
               
chr27:22560056-22559725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 156
               

               
Conread position:
               
87-468
               

               
Cow position:
               
chr27:22735824-22735447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
18, 180
               

               
Conread position:
               
87-485
               

               
Cow position:
               
chr27:435002-435408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
87-500
               

               
Cow position:
               
chr27:7959061-7958649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 63
               

               
Conread position:
               
87-500
               

               
Cow position:
               
chr27:22330888-22330483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 57
               

               
Conread position:
               
87-500
               

               
Cow position:
               
chr27:23554559-23554133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 134
               

               
Conread position:
               
88-433
               

               
Cow position:
               
chr27:27695004-27694657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
17, 157
               

               
Conread position:
               
88-494
               

               
Cow position:
               
chr27:19685939-19685534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 17
               

               
Conread position:
               
88-500
               

               
Cow position:
               
chr27:18739145-18739574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
89-462
               

               
Cow position:
               
chr27:26490133-26489753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 51
               

               
Conread position:
               
89-499
               

               
Cow position:
               
chr27:19660700-19661127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 364
               

               
Conread position:
               
90-351
               

               
Cow position:
               
chr27:14303518-14303769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
90-469
               

               
Cow position:
               
chr27:23890706-23891093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 340
               

               
Conread position:
               
90-500
               

               
Cow position:
               
chr27:20368805-20369225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
16, 118
               

               
Conread position:
               
91-500
               

               
Cow position:
               
chr27:26238798-26239210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 97
               

               
Conread position:
               
97-492
               

               
Cow position:
               
chr27:11536324-11535918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 276
               

               
Conread position:
               
99-300
               

               
Cow position:
               
chr27:19485656-19485859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
101-254
               

               
Cow position:
               
chr27:23060329-23060174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
101-290
               

               
Cow position:
               
chr27:24731251-24731064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
56, 105
               

               
Conread position:
               
101-292
               

               
Cow position:
               
chr27:15332501-15332318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
116, 54
               

               
Conread position:
               
101-300
               

               
Cow position:
               
chr27:24709341-24709538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
53, 159
               

               
Conread position:
               
101-300
               

               
Cow position:
               
chr27:29603605-29603802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
101-355
               

               
Cow position:
               
chr27:17646370-17646128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
101-500
               

               
Cow position:
               
chr27:11815961-11815573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 201
               

               
Conread position:
               
101-500
               

               
Cow position:
               
chr27:26999636-26999238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
52, 41
               

               
Conread position:
               
101-500
               

               
Cow position:
               
chr27:29977035-29977445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
73, 224
               

               
Conread position:
               
102-498
               

               
Cow position:
               
chr27:21408778-21408368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
103-344
               

               
Cow position:
               
chr27:16231151-16230907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
54, 196
               

               
Conread position:
               
108-269
               

               
Cow position:
               
chr27:27747674-27747511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
109-382
               

               
Cow position:
               
chr27:7973969-7974240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 70
               

               
Conread position:
               
120-378
               

               
Cow position:
               
chr27:28260728-28260477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
121-490
               

               
Cow position:
               
chr27:26920108-26919736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 244
               

               
Conread position:
               
122-432
               

               
Cow position:
               
chr27:30261087-30260781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 204
               

               
Conread position:
               
122-500
               

               
Cow position:
               
chr27:22418956-22418578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 15
               

               
Conread position:
               
125-426
               

               
Cow position:
               
chr27:13274353-13274046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
33, 187
               

               
Conread position:
               
128-492
               

               
Cow position:
               
chr27:20641520-20641168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
32, 8
               

               
Conread position:
               
128-500
               

               
Cow position:
               
chr27:14937617-14937242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
129-471
               

               
Cow position:
               
chr27:22423329-22423652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
31, 166
               

               
Conread position:
               
130-350
               

               
Cow position:
               
chr27:18923015-18922796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
171, 32
               

               
Conread position:
               
130-499
               

               
Cow position:
               
chr27:18593088-18593456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
130-499
               

               
Cow position:
               
chr27:29207621-29207988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
27, 182
               

               
Conread position:
               
130-500
               

               
Cow position:
               
chr27:4386246-4385880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 168
               

               
Conread position:
               
131-355
               

               
Cow position:
               
chr27:20812719-20812950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
131-365
               

               
Cow position:
               
chr27:2847669-2847901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
131-385
               

               
Cow position:
               
chr27:22225773-22225526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
131-422
               

               
Cow position:
               
chr27:29504834-29504543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
14, 252
               

               
Conread position:
               
131-424
               

               
Cow position:
               
chr27:12191662-12191383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 35
               

               
Conread position:
               
131-489
               

               
Cow position:
               
chr27:26441233-26440881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
14, 83
               

               
Conread position:
               
131-498
               

               
Cow position:
               
chr27:13005664-13006019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
14, 77
               

               
Conread position:
               
131-500
               

               
Cow position:
               
chr27:6454025-6454401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
131-500
               

               
Cow position:
               
chr27:15319278-15319638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
131-500
               

               
Cow position:
               
chr27:19544105-19543723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 267
               

               
Conread position:
               
131-500
               

               
Cow position:
               
chr27:25998516-25998891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
14, 254
               

               
Conread position:
               
133-329
               

               
Cow position:
               
chr27:1789320-1789123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
162, 134
               

               
Conread position:
               
133-349
               

               
Cow position:
               
chr27:15343459-15343247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
40, 106
               

               
Conread position:
               
133-379
               

               
Cow position:
               
chr27:28035031-28034797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
11, 73
               

               
Conread position:
               
133-384
               

               
Cow position:
               
chr27:20336918-20337180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
24, 126
               

               
Conread position:
               
133-389
               

               
Cow position:
               
chr27:15215047-15215306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
53, 138
               

               
Conread position:
               
133-499
               

               
Cow position:
               
chr27:20758209-20757870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
175, 23
               

               
Conread position:
               
133-500
               

               
Cow position:
               
chr27:27641192-27640805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 46
               

               
Conread position:
               
134-467
               

               
Cow position:
               
chr27:7731436-7731095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 33
               

               
Conread position:
               
134-500
               

               
Cow position:
               
chr27:8942869-8942497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 10
               

               
Conread position:
               
134-500
               

               
Cow position:
               
chr27:27064620-27064253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 160
               

               
Conread position:
               
136-260
               

               
Cow position:
               
chr27:29658891-29658770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
136-300
               

               
Cow position:
               
chr27:6674102-6674265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
160, 97
               

               
Conread position:
               
136-300
               

               
Cow position:
               
chr27:30489589-30489425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
136-301
               

               
Cow position:
               
chr27:26090491-26090325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
136-343
               

               
Cow position:
               
chr27:30908495-30908705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
157, 20
               

               
Conread position:
               
136-350
               

               
Cow position:
               
chr27:28290686-28290881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
136-357
               

               
Cow position:
               
chr27:17918490-17918274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
136-382
               

               
Cow position:
               
chr27:31018006-31017768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
24, 126
               

               
Conread position:
               
136-456
               

               
Cow position:
               
chr27:16589881-16589570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
22, 32
               

               
Conread position:
               
136-461
               

               
Cow position:
               
chr27:28467629-28467291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 49
               

               
Conread position:
               
136-481
               

               
Cow position:
               
chr27:15642996-15643343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 76
               

               
Conread position:
               
136-491
               

               
Cow position:
               
chr27:30988619-30988975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 97
               

               
Conread position:
               
136-498
               

               
Cow position:
               
chr27:22454955-22454596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 159
               

               
Conread position:
               
136-500
               

               
Cow position:
               
chr27:20795614-20795970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 40
               

               
Conread position:
               
136-500
               

               
Cow position:
               
chr27:22723871-22723520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 20
               

               
Conread position:
               
137-294
               

               
Cow position:
               
chr27:14957905-14957750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
20, 35
               

               
Conread position:
               
137-308
               

               
Cow position:
               
chr27:27673191-27673023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
137-381
               

               
Cow position:
               
chr27:4155818-4156067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
137-384
               

               
Cow position:
               
chr27:20085379-20085632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
70, 49
               

               
Conread position:
               
138-474
               

               
Cow position:
               
chr27:27270720-27270377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 141
               

               
Conread position:
               
138-479
               

               
Cow position:
               
chr27:23877023-23876650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
19, 51
               

               
Conread position:
               
138-492
               

               
Cow position:
               
chr27:27684287-27683938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
292, 25
               

               
Conread position:
               
138-500
               

               
Cow position:
               
chr27:23483051-23483409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 12
               

               
Conread position:
               
138-500
               

               
Cow position:
               
chr27:30177726-30177388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
246, 28
               

               
Conread position:
               
139-333
               

               
Cow position:
               
chr27:18826378-18826570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
125, 110
               

               
Conread position:
               
139-378
               

               
Cow position:
               
chr27:6302641-6302401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
156, 24
               

               
Conread position:
               
140-264
               

               
Cow position:
               
chr27:30665251-30665127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
141-478
               

               
Cow position:
               
chr27:1291022-1290700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 15
               

               
Conread position:
               
141-500
               

               
Cow position:
               
chr27:25276970-25277323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 15
               

               
Conread position:
               
143-498
               

               
Cow position:
               
chr27:21393678-21393320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 13
               

               
Conread position:
               
144-299
               

               
Cow position:
               
chr27:23895252-23895404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
13, 104
               

               
Conread position:
               
144-414
               

               
Cow position:
               
chr27:24939719-24940006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
42, 12
               

               
Conread position:
               
144-499
               

               
Cow position:
               
chr27:30359236-30359580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
148-422
               

               
Cow position:
               
chr27:22386708-22386974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
158, 106
               

               
Conread position:
               
150-292
               

               
Cow position:
               
chr27:14675180-14675038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-292
               

               
Cow position:
               
chr27:22654757-22654898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
14, 113
               

               
Conread position:
               
151-402
               

               
Cow position:
               
chr27:26347777-26347534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
6, 34
               

               
Conread position:
               
151-500
               

               
Cow position:
               
chr27:27844167-27843806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 232
               

               
Conread position:
               
152-419
               

               
Cow position:
               
chr27:26134989-26135238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
152, 33
               

               
Conread position:
               
153-364
               

               
Cow position:
               
chr27:2034347-2034564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
107, 53
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr27:29149432-29149258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
132, 80
               

               
Conread position:
               
155-462
               

               
Cow position:
               
chr27:28271310-28270998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
228, 143
               

               
Conread position:
               
155-491
               

               
Cow position:
               
chr27:911254-910907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
75, 15
               

               
Conread position:
               
156-302
               

               
Cow position:
               
chr27:1173892-1173747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
156-324
               

               
Cow position:
               
chr27:30998404-30998231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
138, 68
               

               
Conread position:
               
156-499
               

               
Cow position:
               
chr27:21453253-21452884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
156-500
               

               
Cow position:
               
chr27:536306-536643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
139, 11
               

               
Conread position:
               
156-500
               

               
Cow position:
               
chr27:11273417-11273755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 142
               

               
Conread position:
               
156-500
               

               
Cow position:
               
chr27:12246495-12246846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 88
               

               
Conread position:
               
157-357
               

               
Cow position:
               
chr27:10653527-10653727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
39, 33
               

               
Conread position:
               
157-393
               

               
Cow position:
               
chr27:19083874-19083640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
29, 20
               

               
Conread position:
               
157-411
               

               
Cow position:
               
chr27:24509661-24509910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
208, 132
               

               
Conread position:
               
157-432
               

               
Cow position:
               
chr27:30389455-30389182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
112, 49
               

               
Conread position:
               
157-447
               

               
Cow position:
               
chr27:29312832-29312545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
158, 233
               

               
Conread position:
               
157-489
               

               
Cow position:
               
chr27:19648100-19647766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 102
               

               
Conread position:
               
157-489
               

               
Cow position:
               
chr27:21138673-21138998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
181, 78
               

               
Conread position:
               
158-276
               

               
Cow position:
               
chr27:27255831-27255949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
158-292
               

               
Cow position:
               
chr27:23216473-23216341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
122, 67
               

               
Conread position:
               
158-329
               

               
Cow position:
               
chr27:24022985-24023155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
71, 66
               

               
Conread position:
               
158-413
               

               
Cow position:
               
chr27:674187-673949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
158-424
               

               
Cow position:
               
chr27:8263495-8263229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 196
               

               
Conread position:
               
158-429
               

               
Cow position:
               
chr27:31148605-31148871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
158-431
               

               
Cow position:
               
chr27:20901404-20901675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
67, 154
               

               
Conread position:
               
158-490
               

               
Cow position:
               
chr27:27038994-27038667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 80
               

               
Conread position:
               
158-500
               

               
Cow position:
               
chr27:4672855-4673207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 78
               

               
Conread position:
               
158-500
               

               
Cow position:
               
chr27:23882524-23882188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 76
               

               
Conread position:
               
158-500
               

               
Cow position:
               
chr27:26413411-26413069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 232
               

               
Conread position:
               
159-361
               

               
Cow position:
               
chr27:20803815-20803612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
159-438
               

               
Cow position:
               
chr27:24371087-24371355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
160, 50
               

               
Conread position:
               
159-499
               

               
Cow position:
               
chr27:26581592-26581262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 135
               

               
Conread position:
               
159-500
               

               
Cow position:
               
chr27:20037270-20036942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 32
               

               
Conread position:
               
160-433
               

               
Cow position:
               
chr27:28245648-28245916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
31, 36
               

               
Conread position:
               
160-492
               

               
Cow position:
               
chr27:12278399-12278094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 18
               

               
Conread position:
               
161-492
               

               
Cow position:
               
chr27:20553578-20553895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 118
               

               
Conread position:
               
161-501
               

               
Cow position:
               
chr27:10992203-10992541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 78
               

               
Conread position:
               
163-491
               

               
Cow position:
               
chr27:8353327-8353654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
253, 74
               

               
Conread position:
               
164-300
               

               
Cow position:
               
chr27:13917289-13917424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
164-487
               

               
Cow position:
               
chr27:8430589-8430265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
19, 13
               

               
Conread position:
               
166-310
               

               
Cow position:
               
chr27:29841881-29841738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
166-385
               

               
Cow position:
               
chr27:26013524-26013305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
138, 115
               

               
Conread position:
               
166-499
               

               
Cow position:
               
chr27:30354493-30354158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 224
               

               
Conread position:
               
166-500
               

               
Cow position:
               
chr27:1122883-1123208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
167-422
               

               
Cow position:
               
chr27:20497058-20497318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
168-498
               

               
Cow position:
               
chr27:24014886-24014556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 9
               

               
Conread position:
               
168-500
               

               
Cow position:
               
chr27:19577527-19577861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
170-492
               

               
Cow position:
               
chr27:26786136-26785801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
21, 138
               

               
Conread position:
               
171-435
               

               
Cow position:
               
chr27:715357-715620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 100
               

               
Conread position:
               
178-500
               

               
Cow position:
               
chr27:1058812-1058493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 15
               

               
Conread position:
               
178-500
               

               
Cow position:
               
chr27:4813020-4812690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
125, 214
               

               
Conread position:
               
179-488
               

               
Cow position:
               
chr27:9169775-9169470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 19
               

               
Conread position:
               
180-432
               

               
Cow position:
               
chr27:16625765-16626010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
119, 62
               

               
Conread position:
               
182-486
               

               
Cow position:
               
chr27:11416320-11416614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
183-495
               

               
Cow position:
               
chr27:29515977-29515679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
250, 57
               

               
Conread position:
               
184-378
               

               
Cow position:
               
chr27:21975922-21976111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
187-451
               

               
Cow position:
               
chr27:30672686-30672434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
189-499
               

               
Cow position:
               
chr27:11296144-11296443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
95, 147
               

               
Conread position:
               
195-409
               

               
Cow position:
               
chr27:20056091-20055878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 111
               

               
Conread position:
               
196-403
               

               
Cow position:
               
chr27:19175306-19175095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
28, 128
               

               
Conread position:
               
198-436
               

               
Cow position:
               
chr27:20918774-20919007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
99, 52
               

               
Conread position:
               
198-457
               

               
Cow position:
               
chr27:20247921-20247660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
196, 63
               

               
Conread position:
               
198-500
               

               
Cow position:
               
chr27:706836-707134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 40
               

               
Conread position:
               
199-345
               

               
Cow position:
               
chr27:28472664-28472812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
73, 57
               

               
Conread position:
               
208-347
               

               
Cow position:
               
chr27:30829537-30829676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
208-492
               

               
Cow position:
               
chr27:3790-4066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
97, 58
               

               
Conread position:
               
208-500
               

               
Cow position:
               
chr27:9090897-9090615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 29
               

               
Conread position:
               
208-500
               

               
Cow position:
               
chr27:24999847-24999548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 96
               

               
Conread position:
               
208-500
               

               
Cow position:
               
chr27:25379881-25380177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 186
               

               
Conread position:
               
208-501
               

               
Cow position:
               
chr27:12429300-12429596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 86
               

               
Conread position:
               
210-454
               

               
Cow position:
               
chr27:20789484-20789239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
92, 135
               

               
Conread position:
               
210-500
               

               
Cow position:
               
chr27:23576643-23576354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
175, 93
               

               
Conread position:
               
215-500
               

               
Cow position:
               
chr27:21351121-21350829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
158, 18
               

               
Conread position:
               
228-491
               

               
Cow position:
               
chr27:732488-732749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
158, 28
               

               
Conread position:
               
234-500
               

               
Cow position:
               
chr27:2683226-2682957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
185, 0
               

               
Conread position:
               
238-395
               

               
Cow position:
               
chr27:26979789-26979630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
59, 156
               

               
Conread position:
               
239-500
               

               
Cow position:
               
chr27:27259538-27259795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 57
               

               
Conread position:
               
241-436
               

               
Cow position:
               
chr27:26141696-26141890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
241-463
               

               
Cow position:
               
chr27:7538151-7537932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
65, 21
               

               
Conread position:
               
241-500
               

               
Cow position:
               
chr27:27040528-27040794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
241-500
               

               
Cow position:
               
chr27:30362173-30362429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 9
               

               
Conread position:
               
243-438
               

               
Cow position:
               
chr27:6350912-6350709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
64, 55
               

               
Conread position:
               
243-491
               

               
Cow position:
               
chr27:23070431-23070182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
176, 61
               

               
Conread position:
               
244-370
               

               
Cow position:
               
chr27:4486696-4486570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
244-432
               

               
Cow position:
               
chr27:18491769-18491956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 115
               

               
Conread position:
               
244-499
               

               
Cow position:
               
chr27:6522973-6523231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 53
               

               
Conread position:
               
244-501
               

               
Cow position:
               
chr27:21569911-21569656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 59
               

               
Conread position:
               
245-487
               

               
Cow position:
               
chr27:11412658-11412894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
132, 50
               

               
Conread position:
               
247-470
               

               
Cow position:
               
chr27:154293-154525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
21, 14
               

               
Conread position:
               
247-499
               

               
Cow position:
               
chr27:29283478-29283223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 10
               

               
Conread position:
               
250-418
               

               
Cow position:
               
chr27:20570054-20570222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
14, 54
               

               
Conread position:
               
250-501
               

               
Cow position:
               
chr27:14902718-14902461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 56
               

               
Conread position:
               
251-401
               

               
Cow position:
               
chr27:1565490-1565342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
55, 77
               

               
Conread position:
               
251-454
               

               
Cow position:
               
chr27:31159736-31159934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 91
               

               
Conread position:
               
252-489
               

               
Cow position:
               
chr27:30417620-30417854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
190, 11
               

               
Conread position:
               
253-500
               

               
Cow position:
               
chr27:6058441-6058689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 51
               

               
Conread position:
               
254-500
               

               
Cow position:
               
chr27:8292062-8291825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 31
               

               
Conread position:
               
255-492
               

               
Cow position:
               
chr27:31499010-31499246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
110, 40
               

               
Conread position:
               
257-500
               

               
Cow position:
               
chr27:25790746-25790990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
175, 37
               

               
Conread position:
               
258-500
               

               
Cow position:
               
chr27:26398315-26398072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 52
               

               
Conread position:
               
263-413
               

               
Cow position:
               
chr27:4482908-4482762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
263-456
               

               
Cow position:
               
chr27:4011627-4011816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
263-482
               

               
Cow position:
               
chr27:22268449-22268673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 38
               

               
Conread position:
               
263-498
               

               
Cow position:
               
chr27:28038391-28038153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
169, 14
               

               
Conread position:
               
263-499
               

               
Cow position:
               
chr27:29250828-29251065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
170, 41
               

               
Conread position:
               
263-500
               

               
Cow position:
               
chr27:1183936-1183690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
32, 101
               

               
Conread position:
               
263-500
               

               
Cow position:
               
chr27:16237857-16238076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
36, 92
               

               
Conread position:
               
264-423
               

               
Cow position:
               
chr27:23502437-23502600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
265-492
               

               
Cow position:
               
chr27:27550790-27550569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
157, 18
               

               
Conread position:
               
267-500
               

               
Cow position:
               
chr27:16263294-16263519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
124, 37
               

               
Conread position:
               
268-492
               

               
Cow position:
               
chr27:16871963-16871737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
35, 115
               

               
Conread position:
               
268-492
               

               
Cow position:
               
chr27:27141555-27141772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
169, 37
               

               
Conread position:
               
270-414
               

               
Cow position:
               
chr27:20635133-20635263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
280-492
               

               
Cow position:
               
chr27:28164438-28164233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
280-500
               

               
Cow position:
               
chr27:20591945-20592170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 11
               

               
Conread position:
               
282-486
               

               
Cow position:
               
chr27:20118373-20118573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
282-500
               

               
Cow position:
               
chr27:18215020-18215242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
146, 20
               

               
Conread position:
               
285-486
               

               
Cow position:
               
chr27:24357230-24357438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
93, 16
               

               
Conread position:
               
293-500
               

               
Cow position:
               
chr27:12231936-12231722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
13, 100
               

               
Conread position:
               
294-500
               

               
Cow position:
               
chr27:27055553-27055764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
136, 22
               

               
Conread position:
               
295-483
               

               
Cow position:
               
chr27:18434489-18434301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
136, 7
               

               
Conread position:
               
304-495
               

               
Cow position:
               
chr27:23455167-23454960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
305-499
               

               
Cow position:
               
chr27:22498546-22498738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 85
               

               
Conread position:
               
306-495
               

               
Cow position:
               
chr27:29399805-29400000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
116, 85
               

               
Conread position:
               
308-499
               

               
Cow position:
               
chr27:6037115-6037308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
78, 52
               

               
Conread position:
               
318-500
               

               
Cow position:
               
chr27:24026976-24027158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
106, 89
               

               
Conread position:
               
321-498
               

               
Cow position:
               
chr27:22179787-22179613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
94, 16
               

               
Conread position:
               
321-500
               

               
Cow position:
               
chr27:22771756-22771944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
322-500
               

               
Cow position:
               
chr27:16619994-16620178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
117, 68
               

               
Conread position:
               
328-500
               

               
Cow position:
               
chr27:21419056-21418880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
342-481
               

               
Cow position:
               
chr27:28009035-28008891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
44, 135
               

               
Conread position:
               
342-491
               

               
Cow position:
               
chr27:30989819-30989666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
72, 49
               
Show alignments to all cow chromosomes.