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Cow genome map

           
Conread name:
           
Utr2-C0001811_G15
        

               
Conread position:
               
2-490
               

               
Cow position:
               
chr4:19435514-19435033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 129
               

               
Conread position:
               
9-311
               

               
Cow position:
               
chr4:60363604-60363304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
10-472
               

               
Cow position:
               
chr4:57147581-57147110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
34, 56
               

               
Conread position:
               
11-257
               

               
Cow position:
               
chr4:46656387-46656136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
91, 51
               

               
Conread position:
               
11-500
               

               
Cow position:
               
chr4:12677055-12676575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 148
               

               
Conread position:
               
16-292
               

               
Cow position:
               
chr4:34983254-34983524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 124
               

               
Conread position:
               
17-288
               

               
Cow position:
               
chr4:44786277-44786018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
20-414
               

               
Cow position:
               
chr4:20026863-20027248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 19
               

               
Conread position:
               
20-430
               

               
Cow position:
               
chr4:47041170-47041587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
27, 48
               

               
Conread position:
               
21-500
               

               
Cow position:
               
chr4:508668-509135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
21-500
               

               
Cow position:
               
chr4:57722308-57721838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
18, 220
               

               
Conread position:
               
22-254
               

               
Cow position:
               
chr4:34919033-34919261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 51
               

               
Conread position:
               
22-426
               

               
Cow position:
               
chr4:54767141-54767548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
8, 62
               

               
Conread position:
               
23-232
               

               
Cow position:
               
chr4:16636833-16637043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 87
               

               
Conread position:
               
24-300
               

               
Cow position:
               
chr4:43542236-43542507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
20, 120
               

               
Conread position:
               
25-279
               

               
Cow position:
               
chr4:23758010-23757747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 46
               

               
Conread position:
               
25-333
               

               
Cow position:
               
chr4:34510069-34509770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
30, 53
               

               
Conread position:
               
25-460
               

               
Cow position:
               
chr4:17774127-17774547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
275, 52
               

               
Conread position:
               
26-250
               

               
Cow position:
               
chr4:41099167-41098949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
6, 38
               

               
Conread position:
               
28-357
               

               
Cow position:
               
chr4:44772799-44773138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
29-246
               

               
Cow position:
               
chr4:10016399-10016610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
30-274
               

               
Cow position:
               
chr4:17790062-17790302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
31-256
               

               
Cow position:
               
chr4:60821932-60821707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 23
               

               
Conread position:
               
32-290
               

               
Cow position:
               
chr4:45212956-45213216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
73, 24
               

               
Conread position:
               
32-389
               

               
Cow position:
               
chr4:34699808-34700162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
11, 121
               

               
Conread position:
               
32-492
               

               
Cow position:
               
chr4:48152143-48152598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
70, 25
               

               
Conread position:
               
33-297
               

               
Cow position:
               
chr4:15236856-15236603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
33-300
               

               
Cow position:
               
chr4:7698492-7698230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 16
               

               
Conread position:
               
33-310
               

               
Cow position:
               
chr4:45909729-45910024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
22, 33
               

               
Conread position:
               
33-443
               

               
Cow position:
               
chr4:20124736-20125166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
33-500
               

               
Cow position:
               
chr4:10915603-10916078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 38
               

               
Conread position:
               
34-497
               

               
Cow position:
               
chr4:9137513-9137040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 23
               

               
Conread position:
               
34-500
               

               
Cow position:
               
chr4:19265804-19265335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
35-201
               

               
Cow position:
               
chr4:20196738-20196573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
108, 11
               

               
Conread position:
               
35-212
               

               
Cow position:
               
chr4:29116540-29116727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
35-258
               

               
Cow position:
               
chr4:59074508-59074732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
70, 200
               

               
Conread position:
               
35-500
               

               
Cow position:
               
chr4:33623943-33623481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 13
               

               
Conread position:
               
36-247
               

               
Cow position:
               
chr4:56853081-56852866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
98, 41
               

               
Conread position:
               
36-278
               

               
Cow position:
               
chr4:69497344-69497101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 26
               

               
Conread position:
               
37-436
               

               
Cow position:
               
chr4:52823177-52823573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 30
               

               
Conread position:
               
38-260
               

               
Cow position:
               
chr4:8352336-8352561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 215
               

               
Conread position:
               
38-438
               

               
Cow position:
               
chr4:34369243-34369624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 30
               

               
Conread position:
               
38-470
               

               
Cow position:
               
chr4:1026011-1026436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
42, 8
               

               
Conread position:
               
38-486
               

               
Cow position:
               
chr4:7964420-7964875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 40
               

               
Conread position:
               
39-234
               

               
Cow position:
               
chr4:11366560-11366368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
39-250
               

               
Cow position:
               
chr4:36058273-36058053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
39-298
               

               
Cow position:
               
chr4:40995961-40995697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
15, 205
               

               
Conread position:
               
39-394
               

               
Cow position:
               
chr4:13026519-13026171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
266, 40
               

               
Conread position:
               
39-426
               

               
Cow position:
               
chr4:45250204-45249817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 264
               

               
Conread position:
               
39-499
               

               
Cow position:
               
chr4:18974650-18974196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 31
               

               
Conread position:
               
39-500
               

               
Cow position:
               
chr4:4320766-4321243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 102
               

               
Conread position:
               
39-500
               

               
Cow position:
               
chr4:21391593-21392042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 34
               

               
Conread position:
               
40-268
               

               
Cow position:
               
chr4:55694394-55694174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
39, 22
               

               
Conread position:
               
40-269
               

               
Cow position:
               
chr4:61998976-61999207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
65, 16
               

               
Conread position:
               
40-312
               

               
Cow position:
               
chr4:38977664-38977940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
29, 150
               

               
Conread position:
               
40-391
               

               
Cow position:
               
chr4:11611090-11610752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
11, 94
               

               
Conread position:
               
40-500
               

               
Cow position:
               
chr4:7704087-7704544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 318
               

               
Conread position:
               
40-500
               

               
Cow position:
               
chr4:23526921-23526460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 38
               

               
Conread position:
               
40-501
               

               
Cow position:
               
chr4:25356108-25356544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
65, 25
               

               
Conread position:
               
41-371
               

               
Cow position:
               
chr4:33181766-33181429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 38
               

               
Conread position:
               
41-425
               

               
Cow position:
               
chr4:48104342-48104731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 36
               

               
Conread position:
               
41-427
               

               
Cow position:
               
chr4:36290845-36290468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
41-469
               

               
Cow position:
               
chr4:51769328-51768906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 37
               

               
Conread position:
               
41-499
               

               
Cow position:
               
chr4:15905329-15904862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 8
               

               
Conread position:
               
41-500
               

               
Cow position:
               
chr4:42673400-42672934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 135
               

               
Conread position:
               
41-500
               

               
Cow position:
               
chr4:51903832-51903365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 205
               

               
Conread position:
               
42-256
               

               
Cow position:
               
chr4:48227477-48227680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
42-296
               

               
Cow position:
               
chr4:47305305-47305045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
42-492
               

               
Cow position:
               
chr4:22137994-22138465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
42-500
               

               
Cow position:
               
chr4:27997901-27997448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 79
               

               
Conread position:
               
42-500
               

               
Cow position:
               
chr4:34210255-34209789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 24
               

               
Conread position:
               
43-360
               

               
Cow position:
               
chr4:45800098-45799779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
43-465
               

               
Cow position:
               
chr4:61388850-61389276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
43-495
               

               
Cow position:
               
chr4:55270542-55270993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 256
               

               
Conread position:
               
43-500
               

               
Cow position:
               
chr4:28771851-28772304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 24
               

               
Conread position:
               
44-289
               

               
Cow position:
               
chr4:68491229-68490982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
44-499
               

               
Cow position:
               
chr4:19315785-19316236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 112
               

               
Conread position:
               
45-380
               

               
Cow position:
               
chr4:214230-213904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
60, 70
               

               
Conread position:
               
45-500
               

               
Cow position:
               
chr4:14414136-14414583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 26
               

               
Conread position:
               
45-500
               

               
Cow position:
               
chr4:41867667-41867207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
46-258
               

               
Cow position:
               
chr4:23808179-23807955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
20, 60
               

               
Conread position:
               
46-296
               

               
Cow position:
               
chr4:663020-663271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
56, 152
               

               
Conread position:
               
46-386
               

               
Cow position:
               
chr4:5576992-5577324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
38, 144
               

               
Conread position:
               
46-501
               

               
Cow position:
               
chr4:2894254-2893786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 17
               

               
Conread position:
               
47-213
               

               
Cow position:
               
chr4:22164295-22164127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
47-221
               

               
Cow position:
               
chr4:63198146-63198329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
47-257
               

               
Cow position:
               
chr4:22849285-22849485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 25
               

               
Conread position:
               
47-273
               

               
Cow position:
               
chr4:4647621-4647390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
20, 43
               

               
Conread position:
               
47-315
               

               
Cow position:
               
chr4:19431472-19431748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
56, 139
               

               
Conread position:
               
47-354
               

               
Cow position:
               
chr4:35834256-35834570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
58, 18
               

               
Conread position:
               
47-500
               

               
Cow position:
               
chr4:17832677-17833143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 20
               

               
Conread position:
               
47-500
               

               
Cow position:
               
chr4:37915122-37915567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 32
               

               
Conread position:
               
48-194
               

               
Cow position:
               
chr4:43709939-43710088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 139
               

               
Conread position:
               
48-258
               

               
Cow position:
               
chr4:21520783-21520584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
108, 29
               

               
Conread position:
               
48-259
               

               
Cow position:
               
chr4:61258193-61257985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
107, 55
               

               
Conread position:
               
48-343
               

               
Cow position:
               
chr4:45706251-45705967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
108, 17
               

               
Conread position:
               
48-364
               

               
Cow position:
               
chr4:32694004-32693685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 17
               

               
Conread position:
               
48-438
               

               
Cow position:
               
chr4:16814613-16814209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
17, 86
               

               
Conread position:
               
48-451
               

               
Cow position:
               
chr4:22907713-22907336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
374, 17
               

               
Conread position:
               
48-492
               

               
Cow position:
               
chr4:59785543-59785088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 113
               

               
Conread position:
               
48-500
               

               
Cow position:
               
chr4:9795159-9795608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 191
               

               
Conread position:
               
49-196
               

               
Cow position:
               
chr4:45741867-45742021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
49-197
               

               
Cow position:
               
chr4:45629827-45629980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
49-203
               

               
Cow position:
               
chr4:8388861-8389021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 89
               

               
Conread position:
               
49-234
               

               
Cow position:
               
chr4:22127798-22127977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
49-240
               

               
Cow position:
               
chr4:66354742-66354933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
56, 14
               

               
Conread position:
               
49-248
               

               
Cow position:
               
chr4:45801726-45801531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
107, 14
               

               
Conread position:
               
49-254
               

               
Cow position:
               
chr4:36876639-36876848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
25, 162
               

               
Conread position:
               
49-254
               

               
Cow position:
               
chr4:45773683-45773472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
49-256
               

               
Cow position:
               
chr4:58045415-58045627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
12, 188
               

               
Conread position:
               
49-257
               

               
Cow position:
               
chr4:34722670-34722880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
56, 23
               

               
Conread position:
               
49-267
               

               
Cow position:
               
chr4:53347762-53347973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
17, 82
               

               
Conread position:
               
49-270
               

               
Cow position:
               
chr4:37985946-37985728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
8, 149
               

               
Conread position:
               
49-271
               

               
Cow position:
               
chr4:479588-479797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
49-279
               

               
Cow position:
               
chr4:24163738-24163970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
53, 170
               

               
Conread position:
               
49-287
               

               
Cow position:
               
chr4:61608752-61608988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 90
               

               
Conread position:
               
49-299
               

               
Cow position:
               
chr4:5790859-5790617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
56, 21
               

               
Conread position:
               
49-299
               

               
Cow position:
               
chr4:16869990-16870248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
49-316
               

               
Cow position:
               
chr4:47125618-47125898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
49-350
               

               
Cow position:
               
chr4:21866698-21866383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
23, 98
               

               
Conread position:
               
49-389
               

               
Cow position:
               
chr4:48770788-48770447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 28
               

               
Conread position:
               
49-392
               

               
Cow position:
               
chr4:22546632-22546964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 16
               

               
Conread position:
               
49-432
               

               
Cow position:
               
chr4:2099849-2099468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 263
               

               
Conread position:
               
49-455
               

               
Cow position:
               
chr4:33100590-33101005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 79
               

               
Conread position:
               
49-486
               

               
Cow position:
               
chr4:65824618-65824182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
49-487
               

               
Cow position:
               
chr4:53126313-53125913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
49-499
               

               
Cow position:
               
chr4:34200203-34199768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
49-500
               

               
Cow position:
               
chr4:15439797-15439359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 16
               

               
Conread position:
               
49-500
               

               
Cow position:
               
chr4:15635235-15635680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 88
               

               
Conread position:
               
49-500
               

               
Cow position:
               
chr4:46528766-46529220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
56, 245
               

               
Conread position:
               
50-329
               

               
Cow position:
               
chr4:28841636-28841350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr4:37675842-37675506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 203
               

               
Conread position:
               
50-392
               

               
Cow position:
               
chr4:50194908-50194571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
52, 199
               

               
Conread position:
               
50-458
               

               
Cow position:
               
chr4:45685667-45685277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 21
               

               
Conread position:
               
50-491
               

               
Cow position:
               
chr4:13256286-13255865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 27
               

               
Conread position:
               
50-500
               

               
Cow position:
               
chr4:34165769-34166212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 91
               

               
Conread position:
               
51-392
               

               
Cow position:
               
chr4:59873640-59873304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
51-456
               

               
Cow position:
               
chr4:65930583-65930995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
16, 314
               

               
Conread position:
               
51-486
               

               
Cow position:
               
chr4:20180571-20180106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
28, 323
               

               
Conread position:
               
51-494
               

               
Cow position:
               
chr4:13043484-13043039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 16
               

               
Conread position:
               
51-497
               

               
Cow position:
               
chr4:14938747-14938300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
14, 85
               

               
Conread position:
               
51-500
               

               
Cow position:
               
chr4:58248618-58248170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
52-244
               

               
Cow position:
               
chr4:40393022-40392835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
53, 27
               

               
Conread position:
               
52-282
               

               
Cow position:
               
chr4:45575176-45574958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
52-389
               

               
Cow position:
               
chr4:1419434-1419098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
52-391
               

               
Cow position:
               
chr4:45837419-45837753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
52-441
               

               
Cow position:
               
chr4:45076868-45077247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 20
               

               
Conread position:
               
52-500
               

               
Cow position:
               
chr4:23450879-23451333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 18
               

               
Conread position:
               
52-500
               

               
Cow position:
               
chr4:64191966-64192408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 170
               

               
Conread position:
               
53-357
               

               
Cow position:
               
chr4:45626431-45626714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
53-474
               

               
Cow position:
               
chr4:2885331-2885750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 82
               

               
Conread position:
               
53-490
               

               
Cow position:
               
chr4:68764733-68764290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 160
               

               
Conread position:
               
53-499
               

               
Cow position:
               
chr4:3688142-3687692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 115
               

               
Conread position:
               
53-501
               

               
Cow position:
               
chr4:4318943-4319389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
54-256
               

               
Cow position:
               
chr4:60761852-60761653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
50, 162
               

               
Conread position:
               
54-270
               

               
Cow position:
               
chr4:47283800-47284019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
54-284
               

               
Cow position:
               
chr4:39847943-39847708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
54-298
               

               
Cow position:
               
chr4:59001929-59002173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
48, 26
               

               
Conread position:
               
54-335
               

               
Cow position:
               
chr4:26012625-26012326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
26, 173
               

               
Conread position:
               
54-335
               

               
Cow position:
               
chr4:26830932-26830632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
23, 174
               

               
Conread position:
               
54-353
               

               
Cow position:
               
chr4:63471880-63472162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
55-203
               

               
Cow position:
               
chr4:49424994-49424849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
57, 82
               

               
Conread position:
               
55-279
               

               
Cow position:
               
chr4:19496709-19496479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
50, 17
               

               
Conread position:
               
55-426
               

               
Cow position:
               
chr4:47262748-47262373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 259
               

               
Conread position:
               
56-232
               

               
Cow position:
               
chr4:59557650-59557471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
10, 43
               

               
Conread position:
               
56-236
               

               
Cow position:
               
chr4:56395723-56395540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
56-238
               

               
Cow position:
               
chr4:28854067-28854249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
49, 41
               

               
Conread position:
               
56-255
               

               
Cow position:
               
chr4:348223-348416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
56-278
               

               
Cow position:
               
chr4:1236647-1236887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
56-301
               

               
Cow position:
               
chr4:35638695-35638940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
56-419
               

               
Cow position:
               
chr4:19119226-19118854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
56-492
               

               
Cow position:
               
chr4:570999-570570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 75
               

               
Conread position:
               
56-500
               

               
Cow position:
               
chr4:53134804-53134374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
49, 23
               

               
Conread position:
               
57-204
               

               
Cow position:
               
chr4:34722579-34722427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
57-236
               

               
Cow position:
               
chr4:10410972-10410804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 59
               

               
Conread position:
               
57-258
               

               
Cow position:
               
chr4:39010260-39010055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
48, 8
               

               
Conread position:
               
57-266
               

               
Cow position:
               
chr4:41780026-41780241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
57-268
               

               
Cow position:
               
chr4:30769239-30769033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
48, 8
               

               
Conread position:
               
57-270
               

               
Cow position:
               
chr4:66358433-66358652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
57-282
               

               
Cow position:
               
chr4:62021805-62021575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
48, 95
               

               
Conread position:
               
57-287
               

               
Cow position:
               
chr4:57566484-57566704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
17, 79
               

               
Conread position:
               
57-291
               

               
Cow position:
               
chr4:21161310-21161078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
48, 14
               

               
Conread position:
               
57-291
               

               
Cow position:
               
chr4:46560387-46560153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
47, 87
               

               
Conread position:
               
57-296
               

               
Cow position:
               
chr4:46404705-46404936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
196, 22
               

               
Conread position:
               
57-301
               

               
Cow position:
               
chr4:11900945-11901192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
45, 8
               

               
Conread position:
               
57-313
               

               
Cow position:
               
chr4:13131689-13131424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
49, 73
               

               
Conread position:
               
57-356
               

               
Cow position:
               
chr4:60131437-60131131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
57-363
               

               
Cow position:
               
chr4:63951956-63952262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
45, 211
               

               
Conread position:
               
57-460
               

               
Cow position:
               
chr4:6412991-6413390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
16, 70
               

               
Conread position:
               
57-465
               

               
Cow position:
               
chr4:29107119-29106697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 240
               

               
Conread position:
               
57-489
               

               
Cow position:
               
chr4:1015280-1014841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 112
               

               
Conread position:
               
57-491
               

               
Cow position:
               
chr4:56591250-56590802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 182
               

               
Conread position:
               
57-494
               

               
Cow position:
               
chr4:11099454-11099900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 8
               

               
Conread position:
               
57-498
               

               
Cow position:
               
chr4:21058172-21058622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 174
               

               
Conread position:
               
57-499
               

               
Cow position:
               
chr4:46597563-46597146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 64
               

               
Conread position:
               
57-500
               

               
Cow position:
               
chr4:23846846-23847288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 100
               

               
Conread position:
               
57-500
               

               
Cow position:
               
chr4:42423593-42424039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 14
               

               
Conread position:
               
58-200
               

               
Cow position:
               
chr4:49338246-49338105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 82
               

               
Conread position:
               
58-255
               

               
Cow position:
               
chr4:63261678-63261479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
58-258
               

               
Cow position:
               
chr4:35974574-35974368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
58-258
               

               
Cow position:
               
chr4:36709230-36709026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
58-266
               

               
Cow position:
               
chr4:42044768-42044978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
47, 36
               

               
Conread position:
               
58-287
               

               
Cow position:
               
chr4:27521767-27521530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
46, 185
               

               
Conread position:
               
58-453
               

               
Cow position:
               
chr4:46393648-46393249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 269
               

               
Conread position:
               
58-469
               

               
Cow position:
               
chr4:38944052-38944471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
58-498
               

               
Cow position:
               
chr4:43148621-43148168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
58-499
               

               
Cow position:
               
chr4:31347993-31348430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 88
               

               
Conread position:
               
58-500
               

               
Cow position:
               
chr4:12034478-12034026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 250
               

               
Conread position:
               
58-500
               

               
Cow position:
               
chr4:68076334-68076766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
59-232
               

               
Cow position:
               
chr4:61451424-61451245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
5, 20
               

               
Conread position:
               
59-258
               

               
Cow position:
               
chr4:54543456-54543658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
59-286
               

               
Cow position:
               
chr4:43916500-43916266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
59-298
               

               
Cow position:
               
chr4:14020705-14020466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 120
               

               
Conread position:
               
59-490
               

               
Cow position:
               
chr4:23568367-23567909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
46, 280
               

               
Conread position:
               
59-491
               

               
Cow position:
               
chr4:49158586-49159011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 169
               

               
Conread position:
               
60-236
               

               
Cow position:
               
chr4:59105477-59105655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 90
               

               
Conread position:
               
60-373
               

               
Cow position:
               
chr4:45725069-45724767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
46, 87
               

               
Conread position:
               
60-430
               

               
Cow position:
               
chr4:12031053-12030683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
61-317
               

               
Cow position:
               
chr4:46435538-46435270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
61-500
               

               
Cow position:
               
chr4:25370297-25369879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
62-500
               

               
Cow position:
               
chr4:34631108-34630664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
63-490
               

               
Cow position:
               
chr4:31136957-31136528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 105
               

               
Conread position:
               
64-452
               

               
Cow position:
               
chr4:32458655-32459046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 257
               

               
Conread position:
               
64-491
               

               
Cow position:
               
chr4:3388743-3388316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 41
               

               
Conread position:
               
65-217
               

               
Cow position:
               
chr4:44024339-44024496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 134
               

               
Conread position:
               
65-258
               

               
Cow position:
               
chr4:56805362-56805186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
65-288
               

               
Cow position:
               
chr4:19333582-19333362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
65-308
               

               
Cow position:
               
chr4:45874263-45874512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
65-320
               

               
Cow position:
               
chr4:67393294-67393038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 7
               

               
Conread position:
               
65-326
               

               
Cow position:
               
chr4:17851061-17851314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
65-354
               

               
Cow position:
               
chr4:19292914-19292631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 95
               

               
Conread position:
               
65-368
               

               
Cow position:
               
chr4:54789842-54789536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
65-439
               

               
Cow position:
               
chr4:27632641-27632281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 113
               

               
Conread position:
               
65-483
               

               
Cow position:
               
chr4:59277272-59277700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
12, 172
               

               
Conread position:
               
65-491
               

               
Cow position:
               
chr4:23509791-23509360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 98
               

               
Conread position:
               
65-495
               

               
Cow position:
               
chr4:27276346-27276773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 7
               

               
Conread position:
               
65-500
               

               
Cow position:
               
chr4:656608-657055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 101
               

               
Conread position:
               
65-500
               

               
Cow position:
               
chr4:51728274-51727847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 52
               

               
Conread position:
               
65-500
               

               
Cow position:
               
chr4:52748262-52748695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 51
               

               
Conread position:
               
66-235
               

               
Cow position:
               
chr4:49808718-49808546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
66-251
               

               
Cow position:
               
chr4:45840590-45840411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
66-268
               

               
Cow position:
               
chr4:30648047-30647849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 75
               

               
Conread position:
               
66-284
               

               
Cow position:
               
chr4:10558735-10558516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
41, 106
               

               
Conread position:
               
66-285
               

               
Cow position:
               
chr4:47048313-47048098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
205, 70
               

               
Conread position:
               
66-287
               

               
Cow position:
               
chr4:63596570-63596344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
66-298
               

               
Cow position:
               
chr4:1923533-1923296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
66-299
               

               
Cow position:
               
chr4:32562031-32561794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
66-401
               

               
Cow position:
               
chr4:54335205-54334865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
71, 243
               

               
Conread position:
               
66-432
               

               
Cow position:
               
chr4:9925440-9925800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 35
               

               
Conread position:
               
66-440
               

               
Cow position:
               
chr4:16881175-16881536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 11
               

               
Conread position:
               
66-499
               

               
Cow position:
               
chr4:11897102-11897535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 155
               

               
Conread position:
               
66-499
               

               
Cow position:
               
chr4:44496561-44496148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
66-500
               

               
Cow position:
               
chr4:38330001-38330442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 183
               

               
Conread position:
               
66-500
               

               
Cow position:
               
chr4:49794848-49794442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 12
               

               
Conread position:
               
66-500
               

               
Cow position:
               
chr4:53208482-53208064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 81
               

               
Conread position:
               
66-501
               

               
Cow position:
               
chr4:61897338-61897777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
67-217
               

               
Cow position:
               
chr4:65351462-65351619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
77, 146
               

               
Conread position:
               
67-219
               

               
Cow position:
               
chr4:53941595-53941752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
67-226
               

               
Cow position:
               
chr4:45723448-45723283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
67-226
               

               
Cow position:
               
chr4:53050193-53050030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
35, 140
               

               
Conread position:
               
67-238
               

               
Cow position:
               
chr4:23943445-23943619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 93
               

               
Conread position:
               
67-241
               

               
Cow position:
               
chr4:19200303-19200135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
67-242
               

               
Cow position:
               
chr4:56756056-56755876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
67-243
               

               
Cow position:
               
chr4:47417611-47417433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
67-246
               

               
Cow position:
               
chr4:60332029-60332219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
67-248
               

               
Cow position:
               
chr4:46446989-46447166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
92, 42
               

               
Conread position:
               
67-250
               

               
Cow position:
               
chr4:28660347-28660537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
67-254
               

               
Cow position:
               
chr4:11154471-11154278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
67-257
               

               
Cow position:
               
chr4:11186166-11185970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
67-258
               

               
Cow position:
               
chr4:38949330-38949531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
67-258
               

               
Cow position:
               
chr4:61887839-61887642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
67-260
               

               
Cow position:
               
chr4:42277794-42277980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
90, 23
               

               
Conread position:
               
67-261
               

               
Cow position:
               
chr4:24356704-24356513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
67-269
               

               
Cow position:
               
chr4:25802892-25802685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
67-270
               

               
Cow position:
               
chr4:42347685-42347480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
38, 199
               

               
Conread position:
               
67-270
               

               
Cow position:
               
chr4:47230799-47231004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
67-273
               

               
Cow position:
               
chr4:63078424-63078213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
67-280
               

               
Cow position:
               
chr4:61268375-61268175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
67-284
               

               
Cow position:
               
chr4:60527381-60527160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
8, 60
               

               
Conread position:
               
67-288
               

               
Cow position:
               
chr4:13919177-13918957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
67-291
               

               
Cow position:
               
chr4:19539033-19539264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
6, 27
               

               
Conread position:
               
67-296
               

               
Cow position:
               
chr4:10958944-10958705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 11
               

               
Conread position:
               
67-299
               

               
Cow position:
               
chr4:50687667-50687896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 77
               

               
Conread position:
               
67-299
               

               
Cow position:
               
chr4:58018540-58018309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 26
               

               
Conread position:
               
67-312
               

               
Cow position:
               
chr4:1177911-1177662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
67-315
               

               
Cow position:
               
chr4:58173113-58172844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 258
               

               
Conread position:
               
67-336
               

               
Cow position:
               
chr4:8182437-8182711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
67-336
               

               
Cow position:
               
chr4:34562579-34562308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
21, 98
               

               
Conread position:
               
67-336
               

               
Cow position:
               
chr4:65548834-65549104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
38, 63
               

               
Conread position:
               
67-338
               

               
Cow position:
               
chr4:47038967-47038692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
67-339
               

               
Cow position:
               
chr4:12442107-12441818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 151
               

               
Conread position:
               
67-339
               

               
Cow position:
               
chr4:13241837-13241548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
37, 151
               

               
Conread position:
               
67-345
               

               
Cow position:
               
chr4:19199085-19199370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 283
               

               
Conread position:
               
67-347
               

               
Cow position:
               
chr4:19573487-19573204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
38, 226
               

               
Conread position:
               
67-351
               

               
Cow position:
               
chr4:26644945-26644650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
38, 266
               

               
Conread position:
               
67-355
               

               
Cow position:
               
chr4:2940920-2940630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
38, 252
               

               
Conread position:
               
67-360
               

               
Cow position:
               
chr4:52576557-52576266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 100
               

               
Conread position:
               
67-374
               

               
Cow position:
               
chr4:20142713-20143012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
45, 140
               

               
Conread position:
               
67-375
               

               
Cow position:
               
chr4:41900164-41899872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
26, 140
               

               
Conread position:
               
67-375
               

               
Cow position:
               
chr4:46136947-46136642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
67-385
               

               
Cow position:
               
chr4:45636370-45636044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 238
               

               
Conread position:
               
67-388
               

               
Cow position:
               
chr4:45012955-45013287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
36, 188
               

               
Conread position:
               
67-393
               

               
Cow position:
               
chr4:38946416-38946080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
67-405
               

               
Cow position:
               
chr4:37732281-37732626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 240
               

               
Conread position:
               
67-413
               

               
Cow position:
               
chr4:54927231-54927586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
7, 300
               

               
Conread position:
               
67-416
               

               
Cow position:
               
chr4:54524133-54524479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
67-435
               

               
Cow position:
               
chr4:21088670-21089038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
37, 133
               

               
Conread position:
               
67-473
               

               
Cow position:
               
chr4:66118332-66118737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
37, 220
               

               
Conread position:
               
67-476
               

               
Cow position:
               
chr4:31505820-31506243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 329
               

               
Conread position:
               
67-482
               

               
Cow position:
               
chr4:19745069-19744664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
8, 39
               

               
Conread position:
               
67-491
               

               
Cow position:
               
chr4:19700305-19699872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 184
               

               
Conread position:
               
67-492
               

               
Cow position:
               
chr4:14153313-14152845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
66, 10
               

               
Conread position:
               
67-492
               

               
Cow position:
               
chr4:22236287-22236703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 20
               

               
Conread position:
               
67-492
               

               
Cow position:
               
chr4:35982198-35981760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 104
               

               
Conread position:
               
67-492
               

               
Cow position:
               
chr4:45582925-45583357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 11
               

               
Conread position:
               
67-494
               

               
Cow position:
               
chr4:43894612-43895036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
67-498
               

               
Cow position:
               
chr4:22101062-22101502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 243
               

               
Conread position:
               
67-498
               

               
Cow position:
               
chr4:34209135-34208693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 121
               

               
Conread position:
               
67-499
               

               
Cow position:
               
chr4:4084258-4084682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 76
               

               
Conread position:
               
67-499
               

               
Cow position:
               
chr4:19542347-19541890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
67-499
               

               
Cow position:
               
chr4:43909964-43909516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 347
               

               
Conread position:
               
67-499
               

               
Cow position:
               
chr4:59871680-59871257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 20
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr4:7298-7735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 129
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr4:3341156-3340714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 105
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr4:4084910-4085373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 425
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr4:12004407-12003986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 25
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr4:12591022-12591448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 16
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr4:13326754-13327195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 23
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr4:13668420-13668854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 374
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr4:16238971-16239374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
44, 85
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr4:24371663-24372088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 22
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr4:27665215-27664768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 229
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr4:28836729-28836289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 31
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr4:29291704-29291285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 71
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr4:34383145-34383574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 23
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr4:37343318-37342880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 89
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr4:51851411-51850959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 100
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr4:56239667-56240082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr4:62472274-62471831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 38
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr4:66256877-66256450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 70
               

               
Conread position:
               
67-501
               

               
Cow position:
               
chr4:19584912-19584466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 185
               

               
Conread position:
               
68-234
               

               
Cow position:
               
chr4:51617798-51617969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
68-258
               

               
Cow position:
               
chr4:30691201-30691010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
8, 81
               

               
Conread position:
               
68-291
               

               
Cow position:
               
chr4:6072854-6073076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
37, 165
               

               
Conread position:
               
68-299
               

               
Cow position:
               
chr4:38349997-38350235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
68-335
               

               
Cow position:
               
chr4:62370506-62370246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
68-336
               

               
Cow position:
               
chr4:68652407-68652137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
68-381
               

               
Cow position:
               
chr4:44183922-44184229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
12, 63
               

               
Conread position:
               
68-403
               

               
Cow position:
               
chr4:12474048-12473708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 152
               

               
Conread position:
               
68-406
               

               
Cow position:
               
chr4:54871826-54872166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
37, 169
               

               
Conread position:
               
68-412
               

               
Cow position:
               
chr4:18756634-18756288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 264
               

               
Conread position:
               
68-470
               

               
Cow position:
               
chr4:13284581-13284169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 152
               

               
Conread position:
               
68-472
               

               
Cow position:
               
chr4:36929488-36929104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
365, 10
               

               
Conread position:
               
68-486
               

               
Cow position:
               
chr4:19549197-19548773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
36, 243
               

               
Conread position:
               
68-491
               

               
Cow position:
               
chr4:11004537-11004947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 125
               

               
Conread position:
               
68-500
               

               
Cow position:
               
chr4:10732413-10731981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
353, 29
               

               
Conread position:
               
68-500
               

               
Cow position:
               
chr4:45662319-45662737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 36
               

               
Conread position:
               
68-500
               

               
Cow position:
               
chr4:49629682-49629260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
68-500
               

               
Cow position:
               
chr4:51899218-51898766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 194
               

               
Conread position:
               
69-198
               

               
Cow position:
               
chr4:47035525-47035659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
69-204
               

               
Cow position:
               
chr4:20471076-20470937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
69-236
               

               
Cow position:
               
chr4:19420560-19420729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
69-248
               

               
Cow position:
               
chr4:23271479-23271298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
36, 8
               

               
Conread position:
               
69-257
               

               
Cow position:
               
chr4:2713661-2713854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
69-257
               

               
Cow position:
               
chr4:35291219-35291027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 110
               

               
Conread position:
               
69-265
               

               
Cow position:
               
chr4:12867297-12867104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
69-268
               

               
Cow position:
               
chr4:11506593-11506785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
69-277
               

               
Cow position:
               
chr4:8083613-8083812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 9
               

               
Conread position:
               
69-300
               

               
Cow position:
               
chr4:31178018-31177790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
36, 80
               

               
Conread position:
               
69-300
               

               
Cow position:
               
chr4:38209779-38210011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
36, 89
               

               
Conread position:
               
69-301
               

               
Cow position:
               
chr4:48031529-48031769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 142
               

               
Conread position:
               
69-304
               

               
Cow position:
               
chr4:1645887-1646133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
36, 116
               

               
Conread position:
               
69-319
               

               
Cow position:
               
chr4:42231837-42232078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
36, 53
               

               
Conread position:
               
69-339
               

               
Cow position:
               
chr4:66380140-66380417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
69-353
               

               
Cow position:
               
chr4:68772456-68772174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
33, 86
               

               
Conread position:
               
69-390
               

               
Cow position:
               
chr4:52780040-52779727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
69-393
               

               
Cow position:
               
chr4:26333004-26333326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
36, 75
               

               
Conread position:
               
69-393
               

               
Cow position:
               
chr4:26335171-26335493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
36, 75
               

               
Conread position:
               
69-433
               

               
Cow position:
               
chr4:19500892-19501250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 56
               

               
Conread position:
               
69-441
               

               
Cow position:
               
chr4:20147381-20147011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 236
               

               
Conread position:
               
69-447
               

               
Cow position:
               
chr4:43515920-43515547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 177
               

               
Conread position:
               
69-474
               

               
Cow position:
               
chr4:29384045-29384430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 78
               

               
Conread position:
               
69-474
               

               
Cow position:
               
chr4:48322233-48321817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 76
               

               
Conread position:
               
69-480
               

               
Cow position:
               
chr4:38935554-38935141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 122
               

               
Conread position:
               
69-485
               

               
Cow position:
               
chr4:16762524-16762954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 8
               

               
Conread position:
               
69-492
               

               
Cow position:
               
chr4:3837464-3837050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 60
               

               
Conread position:
               
69-492
               

               
Cow position:
               
chr4:13221984-13222405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 188
               

               
Conread position:
               
69-500
               

               
Cow position:
               
chr4:961469-961900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 71
               

               
Conread position:
               
69-500
               

               
Cow position:
               
chr4:19597136-19597551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 81
               

               
Conread position:
               
69-500
               

               
Cow position:
               
chr4:22344832-22345252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 34
               

               
Conread position:
               
70-298
               

               
Cow position:
               
chr4:46883472-46883707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
70-332
               

               
Cow position:
               
chr4:49800886-49800626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
79, 35
               

               
Conread position:
               
70-355
               

               
Cow position:
               
chr4:10895633-10895913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
33, 219
               

               
Conread position:
               
70-449
               

               
Cow position:
               
chr4:2681524-2681165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
70-473
               

               
Cow position:
               
chr4:9681487-9681091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 32
               

               
Conread position:
               
70-492
               

               
Cow position:
               
chr4:15871546-15871952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 80
               

               
Conread position:
               
70-492
               

               
Cow position:
               
chr4:30574656-30574227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 106
               

               
Conread position:
               
70-500
               

               
Cow position:
               
chr4:59055676-59056077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
71-201
               

               
Cow position:
               
chr4:43436460-43436325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
71-205
               

               
Cow position:
               
chr4:9805813-9805940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
71-255
               

               
Cow position:
               
chr4:12245405-12245221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
34, 147
               

               
Conread position:
               
71-270
               

               
Cow position:
               
chr4:23059658-23059862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 99
               

               
Conread position:
               
71-270
               

               
Cow position:
               
chr4:45964084-45963877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
71-272
               

               
Cow position:
               
chr4:50837897-50837691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
71-280
               

               
Cow position:
               
chr4:61969536-61969745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
187, 30
               

               
Conread position:
               
71-295
               

               
Cow position:
               
chr4:6093870-6094097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
34, 141
               

               
Conread position:
               
71-301
               

               
Cow position:
               
chr4:21112379-21112604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
35, 94
               

               
Conread position:
               
71-301
               

               
Cow position:
               
chr4:45588237-45588475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
71-310
               

               
Cow position:
               
chr4:29247006-29247238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
85, 180
               

               
Conread position:
               
71-369
               

               
Cow position:
               
chr4:56005950-56005660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 235
               

               
Conread position:
               
71-412
               

               
Cow position:
               
chr4:37313361-37313025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
71-492
               

               
Cow position:
               
chr4:25227128-25226704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 69
               

               
Conread position:
               
71-492
               

               
Cow position:
               
chr4:48486189-48485771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
34, 7
               

               
Conread position:
               
71-498
               

               
Cow position:
               
chr4:34171381-34171804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 226
               

               
Conread position:
               
71-500
               

               
Cow position:
               
chr4:20327529-20327952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
72-232
               

               
Cow position:
               
chr4:48239155-48239320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
72-236
               

               
Cow position:
               
chr4:60370332-60370501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
72-254
               

               
Cow position:
               
chr4:44927350-44927528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
32, 50
               

               
Conread position:
               
72-256
               

               
Cow position:
               
chr4:42080512-42080694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
72-270
               

               
Cow position:
               
chr4:3299605-3299801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
72-277
               

               
Cow position:
               
chr4:34234655-34234460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
72-294
               

               
Cow position:
               
chr4:54937287-54937047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
72-295
               

               
Cow position:
               
chr4:12048071-12047841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
72-342
               

               
Cow position:
               
chr4:19430553-19430283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
8, 29
               

               
Conread position:
               
72-373
               

               
Cow position:
               
chr4:2774916-2774609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 241
               

               
Conread position:
               
72-443
               

               
Cow position:
               
chr4:41370749-41371116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 6
               

               
Conread position:
               
72-462
               

               
Cow position:
               
chr4:34022393-34022781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 66
               

               
Conread position:
               
72-471
               

               
Cow position:
               
chr4:28839803-28839418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
117, 36
               

               
Conread position:
               
72-489
               

               
Cow position:
               
chr4:10999517-10999930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
72-497
               

               
Cow position:
               
chr4:30974527-30974102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 78
               

               
Conread position:
               
72-499
               

               
Cow position:
               
chr4:45589402-45589824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 32
               

               
Conread position:
               
72-499
               

               
Cow position:
               
chr4:68234156-68233742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
44, 77
               

               
Conread position:
               
72-500
               

               
Cow position:
               
chr4:11187645-11187222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 120
               

               
Conread position:
               
72-500
               

               
Cow position:
               
chr4:22009869-22010296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
72-500
               

               
Cow position:
               
chr4:26659493-26659068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 93
               

               
Conread position:
               
72-500
               

               
Cow position:
               
chr4:31023641-31023204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 6
               

               
Conread position:
               
72-500
               

               
Cow position:
               
chr4:44613198-44612765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 105
               

               
Conread position:
               
72-501
               

               
Cow position:
               
chr4:66547570-66547991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 286
               

               
Conread position:
               
73-219
               

               
Cow position:
               
chr4:30935167-30935319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
73-223
               

               
Cow position:
               
chr4:54315030-54315185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
73-226
               

               
Cow position:
               
chr4:2770263-2770111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 73
               

               
Conread position:
               
73-235
               

               
Cow position:
               
chr4:46234970-46235131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
29, 134
               

               
Conread position:
               
73-270
               

               
Cow position:
               
chr4:16091125-16091322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
32, 118
               

               
Conread position:
               
73-302
               

               
Cow position:
               
chr4:26959774-26960007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
73-308
               

               
Cow position:
               
chr4:14131616-14131392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
73-308
               

               
Cow position:
               
chr4:38358636-38358865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
73-312
               

               
Cow position:
               
chr4:47748606-47748366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
31, 98
               

               
Conread position:
               
73-356
               

               
Cow position:
               
chr4:38822126-38822409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 119
               

               
Conread position:
               
73-365
               

               
Cow position:
               
chr4:1890561-1890855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 33
               

               
Conread position:
               
73-380
               

               
Cow position:
               
chr4:38156902-38157206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
32, 5
               

               
Conread position:
               
73-389
               

               
Cow position:
               
chr4:7043625-7043947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 236
               

               
Conread position:
               
73-404
               

               
Cow position:
               
chr4:19578575-19578263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
145, 48
               

               
Conread position:
               
73-427
               

               
Cow position:
               
chr4:68569452-68569813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 240
               

               
Conread position:
               
73-490
               

               
Cow position:
               
chr4:22073125-22073537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 165
               

               
Conread position:
               
73-492
               

               
Cow position:
               
chr4:1985843-1985420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 259
               

               
Conread position:
               
73-492
               

               
Cow position:
               
chr4:34310273-34310684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 54
               

               
Conread position:
               
73-492
               

               
Cow position:
               
chr4:54938072-54937657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 72
               

               
Conread position:
               
73-499
               

               
Cow position:
               
chr4:202951-203382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 62
               

               
Conread position:
               
73-499
               

               
Cow position:
               
chr4:18095469-18095915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 203
               

               
Conread position:
               
73-500
               

               
Cow position:
               
chr4:10968205-10968622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 35
               

               
Conread position:
               
74-235
               

               
Cow position:
               
chr4:33389053-33388885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
74-276
               

               
Cow position:
               
chr4:39007688-39007495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
74-284
               

               
Cow position:
               
chr4:617186-617398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 158
               

               
Conread position:
               
74-381
               

               
Cow position:
               
chr4:16513337-16513636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
31, 10
               

               
Conread position:
               
74-382
               

               
Cow position:
               
chr4:14940595-14940282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
31, 109
               

               
Conread position:
               
74-488
               

               
Cow position:
               
chr4:24810260-24810672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
29, 79
               

               
Conread position:
               
74-490
               

               
Cow position:
               
chr4:25197299-25197725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 246
               

               
Conread position:
               
74-500
               

               
Cow position:
               
chr4:27530303-27529876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 31
               

               
Conread position:
               
74-501
               

               
Cow position:
               
chr4:19238409-19238001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 155
               

               
Conread position:
               
75-280
               

               
Cow position:
               
chr4:14512362-14512574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
75-499
               

               
Cow position:
               
chr4:32259648-32260083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 234
               

               
Conread position:
               
76-258
               

               
Cow position:
               
chr4:22482509-22482330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
29, 75
               

               
Conread position:
               
77-269
               

               
Cow position:
               
chr4:42373967-42374162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
77-271
               

               
Cow position:
               
chr4:66168150-66168339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 74
               

               
Conread position:
               
77-291
               

               
Cow position:
               
chr4:51986386-51986606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
77-298
               

               
Cow position:
               
chr4:27699228-27698995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
27, 195
               

               
Conread position:
               
77-368
               

               
Cow position:
               
chr4:24092943-24093243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
28, 237
               

               
Conread position:
               
77-431
               

               
Cow position:
               
chr4:17186160-17186517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 171
               

               
Conread position:
               
77-486
               

               
Cow position:
               
chr4:46258683-46258262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
29, 142
               

               
Conread position:
               
77-492
               

               
Cow position:
               
chr4:9444494-9444919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 227
               

               
Conread position:
               
77-499
               

               
Cow position:
               
chr4:3283266-3283685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
77-500
               

               
Cow position:
               
chr4:12127451-12127880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 78
               

               
Conread position:
               
77-500
               

               
Cow position:
               
chr4:19709131-19708704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 272
               

               
Conread position:
               
77-500
               

               
Cow position:
               
chr4:23444850-23445289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 128
               

               
Conread position:
               
77-500
               

               
Cow position:
               
chr4:25354716-25354317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
28, 169
               

               
Conread position:
               
77-500
               

               
Cow position:
               
chr4:47731052-47730625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 114
               

               
Conread position:
               
78-240
               

               
Cow position:
               
chr4:50131709-50131540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
78-244
               

               
Cow position:
               
chr4:43579229-43579393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
78-255
               

               
Cow position:
               
chr4:48693782-48693604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 62
               

               
Conread position:
               
78-329
               

               
Cow position:
               
chr4:19485492-19485235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
27, 232
               

               
Conread position:
               
78-358
               

               
Cow position:
               
chr4:19102689-19102978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 205
               

               
Conread position:
               
78-382
               

               
Cow position:
               
chr4:46494488-46494179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 30
               

               
Conread position:
               
78-447
               

               
Cow position:
               
chr4:3421811-3421448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
27, 78
               

               
Conread position:
               
78-499
               

               
Cow position:
               
chr4:64040316-64039872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 199
               

               
Conread position:
               
78-500
               

               
Cow position:
               
chr4:37691124-37691545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 280
               

               
Conread position:
               
79-235
               

               
Cow position:
               
chr4:12713846-12713998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
79-253
               

               
Cow position:
               
chr4:27691484-27691661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 126
               

               
Conread position:
               
79-273
               

               
Cow position:
               
chr4:23984932-23985131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 188
               

               
Conread position:
               
79-301
               

               
Cow position:
               
chr4:3853665-3853435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 216
               

               
Conread position:
               
79-461
               

               
Cow position:
               
chr4:19407805-19408198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
79-485
               

               
Cow position:
               
chr4:13590273-13589866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 69
               

               
Conread position:
               
79-500
               

               
Cow position:
               
chr4:40414441-40414868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 62
               

               
Conread position:
               
80-299
               

               
Cow position:
               
chr4:48381575-48381346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
25, 165
               

               
Conread position:
               
80-500
               

               
Cow position:
               
chr4:29805184-29805600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 90
               

               
Conread position:
               
82-499
               

               
Cow position:
               
chr4:60897110-60897509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
84-462
               

               
Cow position:
               
chr4:27344501-27344870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
85-447
               

               
Cow position:
               
chr4:22713315-22713670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 45
               

               
Conread position:
               
85-500
               

               
Cow position:
               
chr4:45738288-45738721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 20
               

               
Conread position:
               
86-245
               

               
Cow position:
               
chr4:39092063-39091904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
86-323
               

               
Cow position:
               
chr4:48423047-48422817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 46
               

               
Conread position:
               
86-500
               

               
Cow position:
               
chr4:11871732-11872149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
62, 40
               

               
Conread position:
               
87-258
               

               
Cow position:
               
chr4:30845563-30845377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
87-269
               

               
Cow position:
               
chr4:48138122-48137943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
18, 86
               

               
Conread position:
               
87-270
               

               
Cow position:
               
chr4:27511726-27511540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
18, 90
               

               
Conread position:
               
87-301
               

               
Cow position:
               
chr4:28753805-28753594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 157
               

               
Conread position:
               
87-389
               

               
Cow position:
               
chr4:45074228-45073940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
87-403
               

               
Cow position:
               
chr4:14500069-14500391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 67
               

               
Conread position:
               
87-412
               

               
Cow position:
               
chr4:4827311-4826980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
87-440
               

               
Cow position:
               
chr4:54478736-54479077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
18, 155
               

               
Conread position:
               
87-477
               

               
Cow position:
               
chr4:43740709-43740307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 69
               

               
Conread position:
               
87-490
               

               
Cow position:
               
chr4:45775152-45775569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 319
               

               
Conread position:
               
87-493
               

               
Cow position:
               
chr4:8770272-8769879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 68
               

               
Conread position:
               
87-499
               

               
Cow position:
               
chr4:26323922-26323497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 314
               

               
Conread position:
               
87-499
               

               
Cow position:
               
chr4:63349297-63349707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 87
               

               
Conread position:
               
87-500
               

               
Cow position:
               
chr4:21531462-21531878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 154
               

               
Conread position:
               
87-500
               

               
Cow position:
               
chr4:31004234-31004642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 50
               

               
Conread position:
               
87-500
               

               
Cow position:
               
chr4:46550567-46550147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 240
               

               
Conread position:
               
88-213
               

               
Cow position:
               
chr4:60072575-60072694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
88-414
               

               
Cow position:
               
chr4:54171802-54171475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 51
               

               
Conread position:
               
88-469
               

               
Cow position:
               
chr4:59372114-59372471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
301, 44
               

               
Conread position:
               
89-500
               

               
Cow position:
               
chr4:7258254-7258664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 101
               

               
Conread position:
               
90-397
               

               
Cow position:
               
chr4:39458834-39458502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
91-500
               

               
Cow position:
               
chr4:57584065-57584464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 305
               

               
Conread position:
               
93-500
               

               
Cow position:
               
chr4:63964826-63965228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 12
               

               
Conread position:
               
94-486
               

               
Cow position:
               
chr4:3820596-3820199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
157, 7
               

               
Conread position:
               
96-453
               

               
Cow position:
               
chr4:38886939-38887321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 88
               

               
Conread position:
               
97-248
               

               
Cow position:
               
chr4:22050948-22051100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
101-255
               

               
Cow position:
               
chr4:68807944-68808100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
101-260
               

               
Cow position:
               
chr4:65970418-65970570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
101-280
               

               
Cow position:
               
chr4:53819523-53819702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
101-343
               

               
Cow position:
               
chr4:20558525-20558284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
41, 80
               

               
Conread position:
               
101-352
               

               
Cow position:
               
chr4:61188705-61188957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
56, 81
               

               
Conread position:
               
101-378
               

               
Cow position:
               
chr4:12901394-12901667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 33
               

               
Conread position:
               
101-399
               

               
Cow position:
               
chr4:56498709-56499013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
38, 114
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr4:6659651-6659972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
127, 107
               

               
Conread position:
               
101-426
               

               
Cow position:
               
chr4:25921147-25920820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
62, 260
               

               
Conread position:
               
101-436
               

               
Cow position:
               
chr4:806221-805888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
56, 113
               

               
Conread position:
               
101-447
               

               
Cow position:
               
chr4:63775-64118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
62, 177
               

               
Conread position:
               
101-462
               

               
Cow position:
               
chr4:29237879-29238242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
71, 201
               

               
Conread position:
               
101-488
               

               
Cow position:
               
chr4:5609930-5610300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 75
               

               
Conread position:
               
101-500
               

               
Cow position:
               
chr4:17052424-17052835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 296
               

               
Conread position:
               
102-447
               

               
Cow position:
               
chr4:11218916-11218579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
39, 155
               

               
Conread position:
               
102-492
               

               
Cow position:
               
chr4:7571570-7571180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 42
               

               
Conread position:
               
103-301
               

               
Cow position:
               
chr4:45862572-45862380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
105-500
               

               
Cow position:
               
chr4:6653881-6653498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
105-500
               

               
Cow position:
               
chr4:25888686-25889070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 42
               

               
Conread position:
               
106-405
               

               
Cow position:
               
chr4:44258176-44258487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
60, 79
               

               
Conread position:
               
107-258
               

               
Cow position:
               
chr4:23799607-23799760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
50, 35
               

               
Conread position:
               
108-500
               

               
Cow position:
               
chr4:38999579-38999189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 153
               

               
Conread position:
               
108-500
               

               
Cow position:
               
chr4:46476784-46477176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 270
               

               
Conread position:
               
109-310
               

               
Cow position:
               
chr4:3268217-3268410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
193, 46
               

               
Conread position:
               
109-418
               

               
Cow position:
               
chr4:47510539-47510237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
111-490
               

               
Cow position:
               
chr4:53100958-53100578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
120-500
               

               
Cow position:
               
chr4:19314157-19313767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
121-299
               

               
Cow position:
               
chr4:57932453-57932268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
121-313
               

               
Cow position:
               
chr4:51920687-51920494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
122-405
               

               
Cow position:
               
chr4:25537690-25537407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
45, 77
               

               
Conread position:
               
122-499
               

               
Cow position:
               
chr4:46455925-46456284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 118
               

               
Conread position:
               
122-500
               

               
Cow position:
               
chr4:19097431-19097054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 121
               

               
Conread position:
               
122-500
               

               
Cow position:
               
chr4:42481325-42480950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 67
               

               
Conread position:
               
123-355
               

               
Cow position:
               
chr4:64657163-64657386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
183, 8
               

               
Conread position:
               
123-500
               

               
Cow position:
               
chr4:54146327-54146712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
124-490
               

               
Cow position:
               
chr4:2602374-2602003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 63
               

               
Conread position:
               
126-333
               

               
Cow position:
               
chr4:13338968-13338763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 130
               

               
Conread position:
               
126-498
               

               
Cow position:
               
chr4:36893496-36893118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 18
               

               
Conread position:
               
129-300
               

               
Cow position:
               
chr4:19256827-19256659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
129-500
               

               
Cow position:
               
chr4:26401092-26400719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 101
               

               
Conread position:
               
130-419
               

               
Cow position:
               
chr4:61313079-61313360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 165
               

               
Conread position:
               
130-427
               

               
Cow position:
               
chr4:65950790-65950488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
130-462
               

               
Cow position:
               
chr4:11496518-11496830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
290, 18
               

               
Conread position:
               
130-468
               

               
Cow position:
               
chr4:16594216-16593878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 120
               

               
Conread position:
               
130-470
               

               
Cow position:
               
chr4:1354480-1354821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 10
               

               
Conread position:
               
131-300
               

               
Cow position:
               
chr4:38700023-38700193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
131-437
               

               
Cow position:
               
chr4:59378042-59377743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 173
               

               
Conread position:
               
131-489
               

               
Cow position:
               
chr4:20279461-20279113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
131-489
               

               
Cow position:
               
chr4:58834264-58834632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
14, 192
               

               
Conread position:
               
131-492
               

               
Cow position:
               
chr4:22860575-22860935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 106
               

               
Conread position:
               
131-500
               

               
Cow position:
               
chr4:12561171-12560799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 17
               

               
Conread position:
               
131-500
               

               
Cow position:
               
chr4:65815573-65815929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
132-288
               

               
Cow position:
               
chr4:32272840-32272997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 104
               

               
Conread position:
               
132-495
               

               
Cow position:
               
chr4:46501499-46501122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
48, 34
               

               
Conread position:
               
133-336
               

               
Cow position:
               
chr4:19324105-19323901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
133-360
               

               
Cow position:
               
chr4:65265175-65265406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
152, 146
               

               
Conread position:
               
133-379
               

               
Cow position:
               
chr4:17084210-17084455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
166, 20
               

               
Conread position:
               
133-482
               

               
Cow position:
               
chr4:47351935-47351586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
27, 170
               

               
Conread position:
               
133-488
               

               
Cow position:
               
chr4:34211298-34210940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 67
               

               
Conread position:
               
133-499
               

               
Cow position:
               
chr4:49089917-49089558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 75
               

               
Conread position:
               
133-500
               

               
Cow position:
               
chr4:37502942-37502584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 30
               

               
Conread position:
               
134-290
               

               
Cow position:
               
chr4:30795215-30795366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
135-475
               

               
Cow position:
               
chr4:13941585-13941246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 103
               

               
Conread position:
               
135-500
               

               
Cow position:
               
chr4:36755870-36755513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
136-253
               

               
Cow position:
               
chr4:7729311-7729426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
136-273
               

               
Cow position:
               
chr4:51708193-51708056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
136-292
               

               
Cow position:
               
chr4:19304476-19304317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
22, 154
               

               
Conread position:
               
136-299
               

               
Cow position:
               
chr4:50676044-50676205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
16, 102
               

               
Conread position:
               
136-342
               

               
Cow position:
               
chr4:48902497-48902700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
136-349
               

               
Cow position:
               
chr4:1999-1786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
136-374
               

               
Cow position:
               
chr4:19098600-19098356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
136-395
               

               
Cow position:
               
chr4:47280255-47280010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
51, 41
               

               
Conread position:
               
136-408
               

               
Cow position:
               
chr4:48173262-48172998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
44, 27
               

               
Conread position:
               
136-468
               

               
Cow position:
               
chr4:30792096-30791759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 126
               

               
Conread position:
               
136-476
               

               
Cow position:
               
chr4:13973842-13974185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 167
               

               
Conread position:
               
136-489
               

               
Cow position:
               
chr4:28613955-28613595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
124, 71
               

               
Conread position:
               
136-497
               

               
Cow position:
               
chr4:41300870-41301225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 41
               

               
Conread position:
               
136-499
               

               
Cow position:
               
chr4:44782502-44782138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 114
               

               
Conread position:
               
136-499
               

               
Cow position:
               
chr4:45367867-45367497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
136-500
               

               
Cow position:
               
chr4:12903950-12903581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
25, 111
               

               
Conread position:
               
136-500
               

               
Cow position:
               
chr4:19321950-19322316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 169
               

               
Conread position:
               
136-500
               

               
Cow position:
               
chr4:21874930-21874593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
136-500
               

               
Cow position:
               
chr4:32726355-32725985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 170
               

               
Conread position:
               
136-500
               

               
Cow position:
               
chr4:51784306-51783944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 27
               

               
Conread position:
               
136-500
               

               
Cow position:
               
chr4:65650005-65650362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 125
               

               
Conread position:
               
136-500
               

               
Cow position:
               
chr4:69406475-69406131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
24, 40
               

               
Conread position:
               
137-425
               

               
Cow position:
               
chr4:33091500-33091221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
137-485
               

               
Cow position:
               
chr4:54191216-54190872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 119
               

               
Conread position:
               
137-489
               

               
Cow position:
               
chr4:17378718-17379044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
8, 58
               

               
Conread position:
               
137-500
               

               
Cow position:
               
chr4:22725214-22724886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 5
               

               
Conread position:
               
138-498
               

               
Cow position:
               
chr4:44838767-44839120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
138-498
               

               
Cow position:
               
chr4:46591792-46591424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 18
               

               
Conread position:
               
138-500
               

               
Cow position:
               
chr4:41441692-41441328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
139-500
               

               
Cow position:
               
chr4:48961363-48961727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
159, 24
               

               
Conread position:
               
141-500
               

               
Cow position:
               
chr4:15462128-15462510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 240
               

               
Conread position:
               
142-291
               

               
Cow position:
               
chr4:61346138-61345992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
142-500
               

               
Cow position:
               
chr4:20157296-20157649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 12
               

               
Conread position:
               
144-274
               

               
Cow position:
               
chr4:45261926-45262058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
144-290
               

               
Cow position:
               
chr4:19456567-19456713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
144-383
               

               
Cow position:
               
chr4:11380399-11380166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
218, 110
               

               
Conread position:
               
144-435
               

               
Cow position:
               
chr4:4843123-4843415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
21, 149
               

               
Conread position:
               
144-491
               

               
Cow position:
               
chr4:8705115-8704756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
144-492
               

               
Cow position:
               
chr4:39128655-39128301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 18
               

               
Conread position:
               
144-500
               

               
Cow position:
               
chr4:28151648-28151291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
144-500
               

               
Cow position:
               
chr4:33433138-33433496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 26
               

               
Conread position:
               
144-500
               

               
Cow position:
               
chr4:62771805-62772171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 20
               

               
Conread position:
               
144-500
               

               
Cow position:
               
chr4:63095954-63096312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 176
               

               
Conread position:
               
145-466
               

               
Cow position:
               
chr4:54804302-54804629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 29
               

               
Conread position:
               
145-500
               

               
Cow position:
               
chr4:47348945-47348595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 89
               

               
Conread position:
               
146-396
               

               
Cow position:
               
chr4:5580676-5580428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
147-360
               

               
Cow position:
               
chr4:34503413-34503197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 178
               

               
Conread position:
               
148-500
               

               
Cow position:
               
chr4:37935170-37935518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 15
               

               
Conread position:
               
150-389
               

               
Cow position:
               
chr4:55508135-55508364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
77, 6
               

               
Conread position:
               
150-432
               

               
Cow position:
               
chr4:65175031-65175304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
150-439
               

               
Cow position:
               
chr4:69543296-69543006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 144
               

               
Conread position:
               
150-489
               

               
Cow position:
               
chr4:396045-395724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
69, 33
               

               
Conread position:
               
150-498
               

               
Cow position:
               
chr4:25879504-25879161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 86
               

               
Conread position:
               
150-500
               

               
Cow position:
               
chr4:36731304-36730953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 143
               

               
Conread position:
               
151-500
               

               
Cow position:
               
chr4:38952666-38952321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
282, 239
               

               
Conread position:
               
151-500
               

               
Cow position:
               
chr4:41185807-41186144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 76
               

               
Conread position:
               
153-500
               

               
Cow position:
               
chr4:56570917-56570567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 151
               

               
Conread position:
               
154-459
               

               
Cow position:
               
chr4:20127949-20128245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
104, 146
               

               
Conread position:
               
154-489
               

               
Cow position:
               
chr4:37344318-37344659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
254, 226
               

               
Conread position:
               
154-500
               

               
Cow position:
               
chr4:24001858-24002206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
142, 13
               

               
Conread position:
               
155-500
               

               
Cow position:
               
chr4:8133431-8133771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 142
               

               
Conread position:
               
156-290
               

               
Cow position:
               
chr4:46702550-46702684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
156-300
               

               
Cow position:
               
chr4:12135818-12135963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
156-317
               

               
Cow position:
               
chr4:61704756-61704917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 83
               

               
Conread position:
               
156-346
               

               
Cow position:
               
chr4:5963882-5964069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
93, 22
               

               
Conread position:
               
156-351
               

               
Cow position:
               
chr4:66136500-66136691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
156-490
               

               
Cow position:
               
chr4:27755196-27755528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 58
               

               
Conread position:
               
156-491
               

               
Cow position:
               
chr4:34337165-34337498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
140, 10
               

               
Conread position:
               
157-297
               

               
Cow position:
               
chr4:61926585-61926723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
157-400
               

               
Cow position:
               
chr4:20066115-20066354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
145, 20
               

               
Conread position:
               
157-434
               

               
Cow position:
               
chr4:51605507-51605774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
157-436
               

               
Cow position:
               
chr4:61148722-61148424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
157-451
               

               
Cow position:
               
chr4:50769659-50769952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
157-455
               

               
Cow position:
               
chr4:10379218-10378918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
36, 235
               

               
Conread position:
               
157-499
               

               
Cow position:
               
chr4:5798072-5797736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
157-501
               

               
Cow position:
               
chr4:243337-242987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
144, 51
               

               
Conread position:
               
158-333
               

               
Cow position:
               
chr4:17218024-17218198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
146, 12
               

               
Conread position:
               
158-362
               

               
Cow position:
               
chr4:54920984-54921184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
27, 81
               

               
Conread position:
               
158-368
               

               
Cow position:
               
chr4:45595926-45596133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
158-397
               

               
Cow position:
               
chr4:15134093-15134342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
77, 182
               

               
Conread position:
               
158-400
               

               
Cow position:
               
chr4:24481567-24481797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
111, 25
               

               
Conread position:
               
158-414
               

               
Cow position:
               
chr4:36577521-36577777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 56
               

               
Conread position:
               
158-424
               

               
Cow position:
               
chr4:69411809-69412088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
190, 104
               

               
Conread position:
               
158-441
               

               
Cow position:
               
chr4:14928065-14927793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
141, 20
               

               
Conread position:
               
158-489
               

               
Cow position:
               
chr4:44451626-44451304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
35, 120
               

               
Conread position:
               
158-500
               

               
Cow position:
               
chr4:1495303-1495637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 47
               

               
Conread position:
               
158-500
               

               
Cow position:
               
chr4:3850657-3850315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 145
               

               
Conread position:
               
158-500
               

               
Cow position:
               
chr4:10056310-10055974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 72
               

               
Conread position:
               
158-500
               

               
Cow position:
               
chr4:10905364-10905696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 46
               

               
Conread position:
               
158-500
               

               
Cow position:
               
chr4:19582512-19582852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
269, 87
               

               
Conread position:
               
158-500
               

               
Cow position:
               
chr4:43865751-43866088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 101
               

               
Conread position:
               
158-500
               

               
Cow position:
               
chr4:55395867-55395531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 58
               

               
Conread position:
               
159-361
               

               
Cow position:
               
chr4:45563851-45563646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
34, 127
               

               
Conread position:
               
159-491
               

               
Cow position:
               
chr4:5460757-5461088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
159-500
               

               
Cow position:
               
chr4:21017-20685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 138
               

               
Conread position:
               
160-363
               

               
Cow position:
               
chr4:13146024-13145821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
90, 168
               

               
Conread position:
               
162-293
               

               
Cow position:
               
chr4:45669672-45669802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
163-377
               

               
Cow position:
               
chr4:1499090-1499294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
163-396
               

               
Cow position:
               
chr4:46183514-46183279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
163-422
               

               
Cow position:
               
chr4:68889460-68889712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
136, 196
               

               
Conread position:
               
164-498
               

               
Cow position:
               
chr4:14920086-14919764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 33
               

               
Conread position:
               
166-446
               

               
Cow position:
               
chr4:48143936-48143647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
166-484
               

               
Cow position:
               
chr4:33030649-33030337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
11, 44
               

               
Conread position:
               
167-499
               

               
Cow position:
               
chr4:5999098-5999430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 29
               

               
Conread position:
               
167-500
               

               
Cow position:
               
chr4:25984317-25983991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
34, 131
               

               
Conread position:
               
170-500
               

               
Cow position:
               
chr4:14945155-14944818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
75, 8
               

               
Conread position:
               
171-398
               

               
Cow position:
               
chr4:18107067-18107291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
172-500
               

               
Cow position:
               
chr4:33395606-33395927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 166
               

               
Conread position:
               
173-398
               

               
Cow position:
               
chr4:59101421-59101647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
173-486
               

               
Cow position:
               
chr4:1405631-1405317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
56, 226
               

               
Conread position:
               
173-499
               

               
Cow position:
               
chr4:19008137-19007807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
125, 143
               

               
Conread position:
               
173-500
               

               
Cow position:
               
chr4:50203844-50203510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
39, 32
               

               
Conread position:
               
174-500
               

               
Cow position:
               
chr4:16601973-16602289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
263, 63
               

               
Conread position:
               
174-500
               

               
Cow position:
               
chr4:59008264-59008607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 108
               

               
Conread position:
               
175-500
               

               
Cow position:
               
chr4:59332893-59333211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 82
               

               
Conread position:
               
176-485
               

               
Cow position:
               
chr4:21371474-21371172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 28
               

               
Conread position:
               
178-489
               

               
Cow position:
               
chr4:10992117-10992429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
225, 8
               

               
Conread position:
               
179-500
               

               
Cow position:
               
chr4:65432235-65431908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 243
               

               
Conread position:
               
181-489
               

               
Cow position:
               
chr4:45114525-45114832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
182-467
               

               
Cow position:
               
chr4:28543533-28543805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
251, 20
               

               
Conread position:
               
184-419
               

               
Cow position:
               
chr4:53346407-53346174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
57, 155
               

               
Conread position:
               
184-477
               

               
Cow position:
               
chr4:25972977-25972682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
113, 24
               

               
Conread position:
               
184-492
               

               
Cow position:
               
chr4:17474519-17474206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 117
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:16799106-16799429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 207
               

               
Conread position:
               
184-500
               

               
Cow position:
               
chr4:11021571-11021887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 209
               

               
Conread position:
               
185-456
               

               
Cow position:
               
chr4:45711441-45711180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
185-500
               

               
Cow position:
               
chr4:20139438-20139757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
118, 29
               

               
Conread position:
               
185-500
               

               
Cow position:
               
chr4:21232795-21233108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 49
               

               
Conread position:
               
186-336
               

               
Cow position:
               
chr4:21173923-21173777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
186-487
               

               
Cow position:
               
chr4:44973715-44973418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 50
               

               
Conread position:
               
188-492
               

               
Cow position:
               
chr4:4672260-4672564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
245, 71
               

               
Conread position:
               
189-447
               

               
Cow position:
               
chr4:11332172-11331913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
69, 201
               

               
Conread position:
               
189-500
               

               
Cow position:
               
chr4:23854255-23853967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 99
               

               
Conread position:
               
189-500
               

               
Cow position:
               
chr4:51739642-51739940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
189-500
               

               
Cow position:
               
chr4:54468228-54468532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
200, 113
               

               
Conread position:
               
191-426
               

               
Cow position:
               
chr4:9571128-9570890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
108, 50
               

               
Conread position:
               
191-500
               

               
Cow position:
               
chr4:35939933-35940249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 112
               

               
Conread position:
               
193-500
               

               
Cow position:
               
chr4:54930351-54930653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 44
               

               
Conread position:
               
194-492
               

               
Cow position:
               
chr4:41602919-41602619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 133
               

               
Conread position:
               
196-500
               

               
Cow position:
               
chr4:68362989-68362705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
111, 45
               

               
Conread position:
               
198-360
               

               
Cow position:
               
chr4:51730016-51729857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
206-406
               

               
Cow position:
               
chr4:52307564-52307751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
208-490
               

               
Cow position:
               
chr4:23564071-23563769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
208-492
               

               
Cow position:
               
chr4:27540675-27540392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
54, 124
               

               
Conread position:
               
208-499
               

               
Cow position:
               
chr4:14964831-14964544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
98, 13
               

               
Conread position:
               
208-500
               

               
Cow position:
               
chr4:10037472-10037173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
39, 46
               

               
Conread position:
               
208-500
               

               
Cow position:
               
chr4:39231465-39231760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 129
               

               
Conread position:
               
208-500
               

               
Cow position:
               
chr4:51867048-51866758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
96, 39
               

               
Conread position:
               
210-498
               

               
Cow position:
               
chr4:25359652-25359376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 87
               

               
Conread position:
               
211-447
               

               
Cow position:
               
chr4:44676246-44676017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
90, 21
               

               
Conread position:
               
211-461
               

               
Cow position:
               
chr4:38705720-38705960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
90, 29
               

               
Conread position:
               
211-489
               

               
Cow position:
               
chr4:44956129-44956416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
70, 182
               

               
Conread position:
               
211-500
               

               
Cow position:
               
chr4:29237117-29237387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
212-489
               

               
Cow position:
               
chr4:67445197-67444917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
171, 91
               

               
Conread position:
               
212-500
               

               
Cow position:
               
chr4:3440453-3440169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
31, 82
               

               
Conread position:
               
212-500
               

               
Cow position:
               
chr4:7501921-7501646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
165, 141
               

               
Conread position:
               
212-500
               

               
Cow position:
               
chr4:19142328-19142051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
16, 22
               

               
Conread position:
               
214-497
               

               
Cow position:
               
chr4:285692-285421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
214-500
               

               
Cow position:
               
chr4:52584307-52584618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
92, 36
               

               
Conread position:
               
215-495
               

               
Cow position:
               
chr4:17111825-17112109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
84, 18
               

               
Conread position:
               
215-500
               

               
Cow position:
               
chr4:64072306-64072591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
214, 21
               

               
Conread position:
               
216-500
               

               
Cow position:
               
chr4:28172759-28173037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
84, 17
               

               
Conread position:
               
217-500
               

               
Cow position:
               
chr4:28399370-28399644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
84, 169
               

               
Conread position:
               
219-472
               

               
Cow position:
               
chr4:23069888-23070144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
78, 97
               

               
Conread position:
               
221-499
               

               
Cow position:
               
chr4:60370783-60371066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
87, 166
               

               
Conread position:
               
221-500
               

               
Cow position:
               
chr4:24688302-24688586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
78, 138
               

               
Conread position:
               
221-500
               

               
Cow position:
               
chr4:58261107-58261391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
79, 147
               

               
Conread position:
               
222-381
               

               
Cow position:
               
chr4:7129741-7129898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
123, 28
               

               
Conread position:
               
222-451
               

               
Cow position:
               
chr4:21516961-21517189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
79, 163
               

               
Conread position:
               
223-500
               

               
Cow position:
               
chr4:59105784-59106048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
47, 81
               

               
Conread position:
               
224-499
               

               
Cow position:
               
chr4:37827809-37828071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
224-500
               

               
Cow position:
               
chr4:37619848-37620125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 77
               

               
Conread position:
               
225-500
               

               
Cow position:
               
chr4:63119200-63119468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 79
               

               
Conread position:
               
227-492
               

               
Cow position:
               
chr4:61999409-61999683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
5, 19
               

               
Conread position:
               
229-500
               

               
Cow position:
               
chr4:69343738-69343478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
231-389
               

               
Cow position:
               
chr4:2537225-2537065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
133, 66
               

               
Conread position:
               
231-469
               

               
Cow position:
               
chr4:19423413-19423179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
121, 69
               

               
Conread position:
               
231-498
               

               
Cow position:
               
chr4:19463529-19463255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
207, 153
               

               
Conread position:
               
231-500
               

               
Cow position:
               
chr4:20299308-20299033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 92
               

               
Conread position:
               
232-492
               

               
Cow position:
               
chr4:11201852-11201588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 91
               

               
Conread position:
               
232-500
               

               
Cow position:
               
chr4:11671484-11671215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 69
               

               
Conread position:
               
234-436
               

               
Cow position:
               
chr4:11154260-11154066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
65, 82
               

               
Conread position:
               
235-499
               

               
Cow position:
               
chr4:53209269-53208999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
235-500
               

               
Cow position:
               
chr4:52631934-52632207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
10, 217
               

               
Conread position:
               
237-354
               

               
Cow position:
               
chr4:22482261-22482145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
237-436
               

               
Cow position:
               
chr4:42347252-42347453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
68, 93
               

               
Conread position:
               
237-500
               

               
Cow position:
               
chr4:53546055-53545792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
237, 20
               

               
Conread position:
               
238-441
               

               
Cow position:
               
chr4:45483471-45483259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
238-500
               

               
Cow position:
               
chr4:38181709-38181445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
14, 131
               

               
Conread position:
               
239-450
               

               
Cow position:
               
chr4:17660160-17660376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
30, 210
               

               
Conread position:
               
240-380
               

               
Cow position:
               
chr4:60215430-60215570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
8, 105
               

               
Conread position:
               
240-436
               

               
Cow position:
               
chr4:46720143-46720333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
148, 53
               

               
Conread position:
               
240-491
               

               
Cow position:
               
chr4:44024793-44025046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
17, 95
               

               
Conread position:
               
240-500
               

               
Cow position:
               
chr4:52497574-52497812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
241-441
               

               
Cow position:
               
chr4:54851095-54851294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
241-450
               

               
Cow position:
               
chr4:22741392-22741599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
242-484
               

               
Cow position:
               
chr4:49001271-49001522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
68, 143
               

               
Conread position:
               
243-484
               

               
Cow position:
               
chr4:43749792-43750033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
29, 55
               

               
Conread position:
               
243-491
               

               
Cow position:
               
chr4:24118886-24119137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 81
               

               
Conread position:
               
243-500
               

               
Cow position:
               
chr4:22051450-22051706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 87
               

               
Conread position:
               
243-500
               

               
Cow position:
               
chr4:49424847-49424601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 17
               

               
Conread position:
               
244-352
               

               
Cow position:
               
chr4:60072936-60073050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
244-405
               

               
Cow position:
               
chr4:26011870-26011714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
244-500
               

               
Cow position:
               
chr4:51630662-51630420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
189, 59
               

               
Conread position:
               
244-500
               

               
Cow position:
               
chr4:61972443-61972712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
150, 58
               

               
Conread position:
               
245-500
               

               
Cow position:
               
chr4:8801527-8801270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 150
               

               
Conread position:
               
246-368
               

               
Cow position:
               
chr4:42253110-42253231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
247-500
               

               
Cow position:
               
chr4:5984027-5984282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 11
               

               
Conread position:
               
247-500
               

               
Cow position:
               
chr4:10412399-10412141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
54, 109
               

               
Conread position:
               
248-417
               

               
Cow position:
               
chr4:47047913-47047743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
18, 8
               

               
Conread position:
               
249-500
               

               
Cow position:
               
chr4:11901546-11901800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 79
               

               
Conread position:
               
250-455
               

               
Cow position:
               
chr4:33869669-33869468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
120, 47
               

               
Conread position:
               
250-486
               

               
Cow position:
               
chr4:27687941-27687700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 138
               

               
Conread position:
               
250-489
               

               
Cow position:
               
chr4:37553025-37553270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
47, 54
               

               
Conread position:
               
250-489
               

               
Cow position:
               
chr4:62411893-62411646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
250-500
               

               
Cow position:
               
chr4:479994-480244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 54
               

               
Conread position:
               
250-500
               

               
Cow position:
               
chr4:30690729-30690487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
250-501
               

               
Cow position:
               
chr4:16859716-16859958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
57, 76
               

               
Conread position:
               
250-501
               

               
Cow position:
               
chr4:22849702-22849948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
49, 93
               

               
Conread position:
               
251-500
               

               
Cow position:
               
chr4:33357949-33357694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
58, 50
               

               
Conread position:
               
252-430
               

               
Cow position:
               
chr4:68855657-68855488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
134, 5
               

               
Conread position:
               
252-436
               

               
Cow position:
               
chr4:30929614-30929426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
252-490
               

               
Cow position:
               
chr4:52166839-52167073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 139
               

               
Conread position:
               
252-499
               

               
Cow position:
               
chr4:65538405-65538644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
253-488
               

               
Cow position:
               
chr4:37465585-37465809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
179, 49
               

               
Conread position:
               
254-408
               

               
Cow position:
               
chr4:48239442-48239592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
254-485
               

               
Cow position:
               
chr4:34924680-34924915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 86
               

               
Conread position:
               
254-499
               

               
Cow position:
               
chr4:54975306-54975072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
254-500
               

               
Cow position:
               
chr4:19542805-19542559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 61
               

               
Conread position:
               
255-432
               

               
Cow position:
               
chr4:5047331-5047502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
255-499
               

               
Cow position:
               
chr4:53999501-53999743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 23
               

               
Conread position:
               
256-494
               

               
Cow position:
               
chr4:69386095-69385876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
257-500
               

               
Cow position:
               
chr4:46370832-46370573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 143
               

               
Conread position:
               
260-500
               

               
Cow position:
               
chr4:19558725-19558489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
43, 14
               

               
Conread position:
               
263-374
               

               
Cow position:
               
chr4:26683675-26683566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
263-410
               

               
Cow position:
               
chr4:61451238-61451087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
37, 70
               

               
Conread position:
               
263-467
               

               
Cow position:
               
chr4:568902-568691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
120, 33
               

               
Conread position:
               
263-479
               

               
Cow position:
               
chr4:36725042-36724826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 129
               

               
Conread position:
               
263-489
               

               
Cow position:
               
chr4:65730919-65731146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
55, 38
               

               
Conread position:
               
263-492
               

               
Cow position:
               
chr4:43495898-43495672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
81, 25
               

               
Conread position:
               
263-492
               

               
Cow position:
               
chr4:56410179-56409952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
87, 35
               

               
Conread position:
               
263-492
               

               
Cow position:
               
chr4:61214994-61215227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
263-499
               

               
Cow position:
               
chr4:56233683-56233451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
44, 62
               

               
Conread position:
               
263-500
               

               
Cow position:
               
chr4:1915577-1915815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
32, 68
               

               
Conread position:
               
263-500
               

               
Cow position:
               
chr4:19561681-19561457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
263-500
               

               
Cow position:
               
chr4:23059995-23060240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
120, 58
               

               
Conread position:
               
263-500
               

               
Cow position:
               
chr4:27511266-27511034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
23, 60
               

               
Conread position:
               
263-500
               

               
Cow position:
               
chr4:48137913-48137672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 128
               

               
Conread position:
               
264-499
               

               
Cow position:
               
chr4:46275178-46274957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
174, 50
               

               
Conread position:
               
265-500
               

               
Cow position:
               
chr4:3475629-3475394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
42, 107
               

               
Conread position:
               
266-492
               

               
Cow position:
               
chr4:16637606-16637828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
171, 35
               

               
Conread position:
               
266-499
               

               
Cow position:
               
chr4:65891990-65891755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
122, 32
               

               
Conread position:
               
267-447
               

               
Cow position:
               
chr4:42278207-42278387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
36, 155
               

               
Conread position:
               
267-492
               

               
Cow position:
               
chr4:10026481-10026259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 125
               

               
Conread position:
               
267-497
               

               
Cow position:
               
chr4:26746480-26746250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 124
               

               
Conread position:
               
267-500
               

               
Cow position:
               
chr4:1237117-1237353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 125
               

               
Conread position:
               
268-500
               

               
Cow position:
               
chr4:67408523-67408301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
269-491
               

               
Cow position:
               
chr4:53833041-53832817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
164, 34
               

               
Conread position:
               
269-492
               

               
Cow position:
               
chr4:33421361-33421591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
32, 80
               

               
Conread position:
               
270-473
               

               
Cow position:
               
chr4:61088555-61088367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
270-499
               

               
Cow position:
               
chr4:63813318-63813538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 34
               

               
Conread position:
               
271-499
               

               
Cow position:
               
chr4:18576777-18577012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
28, 122
               

               
Conread position:
               
271-500
               

               
Cow position:
               
chr4:22215660-22215892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
30, 56
               

               
Conread position:
               
275-389
               

               
Cow position:
               
chr4:54937036-54936923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
277-500
               

               
Cow position:
               
chr4:43369859-43370087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
279-500
               

               
Cow position:
               
chr4:55523351-55523137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
14, 131
               

               
Conread position:
               
281-451
               

               
Cow position:
               
chr4:46552340-46552508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
151, 23
               

               
Conread position:
               
291-491
               

               
Cow position:
               
chr4:45896-45689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 101
               

               
Conread position:
               
293-490
               

               
Cow position:
               
chr4:23555229-23555024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
96, 170
               

               
Conread position:
               
293-499
               

               
Cow position:
               
chr4:39009938-39009729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
21, 36
               

               
Conread position:
               
297-471
               

               
Cow position:
               
chr4:26541706-26541526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
297-500
               

               
Cow position:
               
chr4:54501479-54501686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
7, 95
               

               
Conread position:
               
299-433
               

               
Cow position:
               
chr4:63077310-63077444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
21, 93
               

               
Conread position:
               
300-501
               

               
Cow position:
               
chr4:23911619-23911827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
89, 21
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr4:67392921-67392733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
303-500
               

               
Cow position:
               
chr4:43542774-43542970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
91, 54
               

               
Conread position:
               
303-500
               

               
Cow position:
               
chr4:57931875-57931673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
304-436
               

               
Cow position:
               
chr4:3462087-3462214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
304-501
               

               
Cow position:
               
chr4:57555932-57555728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
130, 87
               

               
Conread position:
               
305-498
               

               
Cow position:
               
chr4:44072807-44073005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
134, 16
               

               
Conread position:
               
306-485
               

               
Cow position:
               
chr4:23558451-23558264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
306-500
               

               
Cow position:
               
chr4:54667729-54667928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
307-487
               

               
Cow position:
               
chr4:23565475-23565287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
307-490
               

               
Cow position:
               
chr4:23570761-23570570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
308-482
               

               
Cow position:
               
chr4:46058795-46058970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
128, 76
               

               
Conread position:
               
309-500
               

               
Cow position:
               
chr4:61391249-61391441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
133, 16
               

               
Conread position:
               
309-500
               

               
Cow position:
               
chr4:62570774-62570578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 83
               

               
Conread position:
               
311-491
               

               
Cow position:
               
chr4:49212760-49212949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
112, 71
               

               
Conread position:
               
313-492
               

               
Cow position:
               
chr4:41292030-41292209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
119, 41
               

               
Conread position:
               
314-447
               

               
Cow position:
               
chr4:45574955-45574826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
315-491
               

               
Cow position:
               
chr4:44902386-44902215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
315-500
               

               
Cow position:
               
chr4:42232608-42232427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
150, 76
               

               
Conread position:
               
318-500
               

               
Cow position:
               
chr4:42266805-42266979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
321-500
               

               
Cow position:
               
chr4:21064061-21064241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
109, 63
               

               
Conread position:
               
321-500
               

               
Cow position:
               
chr4:56852847-56852660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
37, 86
               

               
Conread position:
               
322-500
               

               
Cow position:
               
chr4:26163030-26163207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
67, 106
               

               
Conread position:
               
324-488
               

               
Cow position:
               
chr4:46668508-46668345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
112, 40
               

               
Conread position:
               
325-500
               

               
Cow position:
               
chr4:23573487-23573304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
64, 11
               

               
Conread position:
               
331-500
               

               
Cow position:
               
chr4:7249635-7249806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
333-494
               

               
Cow position:
               
chr4:13141276-13141449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
340-497
               

               
Cow position:
               
chr4:41907867-41908026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
93, 50
               

               
Conread position:
               
340-500
               

               
Cow position:
               
chr4:620225-620391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
93, 50
               

               
Conread position:
               
340-500
               

               
Cow position:
               
chr4:2536756-2536596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
96, 50
               

               
Conread position:
               
341-499
               

               
Cow position:
               
chr4:22744249-22744085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
101, 49
               

               
Conread position:
               
341-500
               

               
Cow position:
               
chr4:29813613-29813768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 105
               

               
Conread position:
               
343-500
               

               
Cow position:
               
chr4:10472145-10471986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
90, 47
               

               
Conread position:
               
347-481
               

               
Cow position:
               
chr4:13608162-13608023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 44
               

               
Conread position:
               
355-500
               

               
Cow position:
               
chr4:55508504-55508653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
356-500
               

               
Cow position:
               
chr4:21246654-21246801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
367-500
               

               
Cow position:
               
chr4:40576021-40576154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
372-500
               

               
Cow position:
               
chr4:46385679-46385815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
61, 0
               
Show alignments to all cow chromosomes.