Cow genome map

Conread name: Utr2-C0001811_G15

Conread position: 2-499
Cow position: chrX:12291013-12290533 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 10

Conread position: 7-258
Cow position: chrX:44123545-44123295 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 70, 124

Conread position: 8-341
Cow position: chrX:4036876-4037218 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 228
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 28, 131

Conread position: 17-270
Cow position: chrX:44995781-44995526 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 88, 28

Conread position: 19-259
Cow position: chrX:35410033-35409791 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 11, 28

Conread position: 19-499
Cow position: chrX:11843953-11844445 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 39

Conread position: 20-491
Cow position: chrX:27705869-27705395 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 45

Conread position: 21-470
Cow position: chrX:22386958-22387421 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 232

Conread position: 22-492
Cow position: chrX:30133044-30133519 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 23

Conread position: 22-500
Cow position: chrX:42246900-42247387 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 363

Conread position: 26-260
Cow position: chrX:47100316-47100560 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 13, 54

Conread position: 26-304
Cow position: chrX:39179954-39180239 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 61

Conread position: 27-491
Cow position: chrX:44962026-44961553 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 30

Conread position: 28-413
Cow position: chrX:40175451-40175055 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 251
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 224

Conread position: 28-499
Cow position: chrX:16541380-16541880 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 17

Conread position: 29-497
Cow position: chrX:34412121-34411640 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 49

Conread position: 30-428
Cow position: chrX:23498409-23498808 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 262
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 14, 81

Conread position: 32-424
Cow position: chrX:18111653-18111267 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 277

Conread position: 32-500
Cow position: chrX:6278226-6278709 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 44

Conread position: 32-500
Cow position: chrX:40826479-40826950 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 265

Conread position: 33-356
Cow position: chrX:27380634-27380296 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 227
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 303

Conread position: 33-500
Cow position: chrX:20887378-20887848 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 74

Conread position: 34-254
Cow position: chrX:44225470-44225687 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 31

Conread position: 34-500
Cow position: chrX:5872599-5872110 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 31

Conread position: 35-223
Cow position: chrX:1571333-1571514 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 71, 27

Conread position: 35-343
Cow position: chrX:34540950-34540635 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 207
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 69, 287

Conread position: 35-412
Cow position: chrX:33654577-33654958 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 15

Conread position: 35-470
Cow position: chrX:35885466-35885903 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 30

Conread position: 35-500
Cow position: chrX:40480583-40481075 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 32

Conread position: 37-226
Cow position: chrX:41215587-41215394 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 66, 8

Conread position: 38-248
Cow position: chrX:19000391-19000176 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 38-258
Cow position: chrX:5876368-5876147 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 95

Conread position: 38-296
Cow position: chrX:43008873-43008611 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 67, 29

Conread position: 38-314
Cow position: chrX:18872998-18873285 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 192
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 16

Conread position: 38-357
Cow position: chrX:39353039-39352722 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 235
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 17, 111

Conread position: 38-364
Cow position: chrX:2674684-2675022 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 231
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 47, 221

Conread position: 38-371
Cow position: chrX:3650441-3650111 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 221
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 72

Conread position: 38-500
Cow position: chrX:7722240-7721781 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 93

Conread position: 39-216
Cow position: chrX:43028489-43028314 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 66, 16

Conread position: 39-357
Cow position: chrX:27511679-27511369 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 54

Conread position: 39-447
Cow position: chrX:8917658-8917251 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 42

Conread position: 39-498
Cow position: chrX:30962612-30963073 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 29

Conread position: 39-499
Cow position: chrX:15546144-15545692 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 251

Conread position: 39-499
Cow position: chrX:20339629-20340093 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 174

Conread position: 39-500
Cow position: chrX:34454920-34454466 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 27

Conread position: 39-500
Cow position: chrX:38935544-38935078 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 157

Conread position: 39-500
Cow position: chrX:46588086-46587614 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 98

Conread position: 40-297
Cow position: chrX:47985474-47985214 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 65, 27

Conread position: 40-300
Cow position: chrX:26205196-26205450 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 17, 38

Conread position: 40-308
Cow position: chrX:4327922-4328193 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 59, 30

Conread position: 40-333
Cow position: chrX:44590802-44591096 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 192
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 63, 16

Conread position: 40-491
Cow position: chrX:3580205-3579750 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 26

Conread position: 40-492
Cow position: chrX:44055067-44054606 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 261

Conread position: 40-500
Cow position: chrX:21672825-21672348 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 14

Conread position: 41-218
Cow position: chrX:35509420-35509599 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 61, 26

Conread position: 41-300
Cow position: chrX:1553229-1552967 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 173
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 64, 25

Conread position: 41-317
Cow position: chrX:32574586-32574294 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 199
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 41-325
Cow position: chrX:43151888-43152183 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 192
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 28, 260

Conread position: 41-333
Cow position: chrX:48194632-48194925 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 188
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 63, 25

Conread position: 41-419
Cow position: chrX:4403579-4403196 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 273

Conread position: 41-460
Cow position: chrX:27207053-27206636 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 292
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 178, 24

Conread position: 42-487
Cow position: chrX:44656712-44657155 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 59

Conread position: 42-498
Cow position: chrX:15146942-15147389 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 21

Conread position: 43-436
Cow position: chrX:22921585-22921181 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 163

Conread position: 44-238
Cow position: chrX:11529596-11529403 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 111

Conread position: 44-292
Cow position: chrX:1719361-1719121 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 61, 0

Conread position: 44-295
Cow position: chrX:38968155-38967891 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 31, 190

Conread position: 44-300
Cow position: chrX:26979530-26979791 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 23, 177

Conread position: 45-298
Cow position: chrX:35659056-35658800 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 27, 199

Conread position: 45-492
Cow position: chrX:7179144-7178713 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 64

Conread position: 46-217
Cow position: chrX:21335-21171 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 46-258
Cow position: chrX:17498582-17498362 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 20, 0

Conread position: 46-260
Cow position: chrX:30041845-30042053 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 46-301
Cow position: chrX:42480080-42479830 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 56, 19

Conread position: 46-354
Cow position: chrX:6541485-6541791 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 220
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 137, 17

Conread position: 46-498
Cow position: chrX:45598352-45598805 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 104

Conread position: 46-500
Cow position: chrX:46072571-46073024 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 104

Conread position: 46-500
Cow position: chrX:48010863-48010391 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 47-206
Cow position: chrX:13135296-13135459 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 17, 112

Conread position: 47-248
Cow position: chrX:1938269-1938064 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 47-270
Cow position: chrX:46910062-46909843 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 58, 18

Conread position: 47-325
Cow position: chrX:45403291-45403572 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 185
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 20

Conread position: 47-336
Cow position: chrX:42894174-42893880 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 18

Conread position: 47-426
Cow position: chrX:47610046-47609681 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 257
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 27, 193

Conread position: 47-499
Cow position: chrX:1175734-1176185 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 90

Conread position: 47-500
Cow position: chrX:23563535-23564000 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 272

Conread position: 48-257
Cow position: chrX:35681825-35681608 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 170
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 24, 0

Conread position: 48-284
Cow position: chrX:40574689-40574928 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 56, 201

Conread position: 48-409
Cow position: chrX:47657644-47657276 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 259
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 57, 17

Conread position: 48-491
Cow position: chrX:4268819-4269261 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 18

Conread position: 48-500
Cow position: chrX:41790176-41790648 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 18

Conread position: 49-235
Cow position: chrX:41011141-41010961 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 56, 22

Conread position: 49-245
Cow position: chrX:11674362-11674162 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 16

Conread position: 49-246
Cow position: chrX:4169774-4169979 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 12, 119

Conread position: 49-263
Cow position: chrX:14135926-14135710 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 56, 17

Conread position: 49-290
Cow position: chrX:27447973-27447708 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 49-299
Cow position: chrX:36109361-36109618 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 49-299
Cow position: chrX:47079880-47079626 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 169
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 48, 192

Conread position: 49-316
Cow position: chrX:42449760-42450033 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 49-336
Cow position: chrX:6599521-6599821 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 210
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 11, 31

Conread position: 49-337
Cow position: chrX:35430989-35431282 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 28

Conread position: 49-352
Cow position: chrX:11825391-11825693 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 202
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 54, 18

Conread position: 49-453
Cow position: chrX:19879268-19878899 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 274
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 28

Conread position: 49-487
Cow position: chrX:31436723-31436292 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 108

Conread position: 49-492
Cow position: chrX:32420455-32420023 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 18

Conread position: 49-500
Cow position: chrX:17231990-17231531 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 315

Conread position: 49-500
Cow position: chrX:21064538-21064083 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 18

Conread position: 49-500
Cow position: chrX:27446935-27446485 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 28

Conread position: 49-500
Cow position: chrX:38071521-38071974 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 276
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 40, 170

Conread position: 49-500
Cow position: chrX:47873079-47873544 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 128

Conread position: 50-258
Cow position: chrX:8327157-8326944 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 54, 0

Conread position: 50-262
Cow position: chrX:21288363-21288572 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 137, 21

Conread position: 50-295
Cow position: chrX:25049029-25049279 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 55, 0

Conread position: 50-348
Cow position: chrX:48474156-48473860 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 203
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 100, 17

Conread position: 50-357
Cow position: chrX:30580-30271 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 216
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 104, 15

Conread position: 50-455
Cow position: chrX:45977175-45976765 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 27

Conread position: 50-490
Cow position: chrX:33001150-33000710 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 89

Conread position: 50-499
Cow position: chrX:13177233-13177667 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 383, 27

Conread position: 50-500
Cow position: chrX:5637926-5638373 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 102

Conread position: 50-500
Cow position: chrX:33466872-33466410 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 16

Conread position: 50-500
Cow position: chrX:44192190-44192646 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 317

Conread position: 51-257
Cow position: chrX:30958976-30958767 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 103, 19

Conread position: 51-281
Cow position: chrX:20345702-20345470 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 54, 213

Conread position: 51-291
Cow position: chrX:19717762-19717529 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 181
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 86, 0

Conread position: 51-301
Cow position: chrX:44040427-44040178 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 54, 26

Conread position: 51-388
Cow position: chrX:48071413-48071072 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 230
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 54, 269

Conread position: 51-389
Cow position: chrX:45413365-45413715 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 237
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 14

Conread position: 51-397
Cow position: chrX:12095522-12095870 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 20

Conread position: 51-419
Cow position: chrX:4512494-4512116 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 251
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 54, 19

Conread position: 51-468
Cow position: chrX:37956096-37955666 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 315

Conread position: 51-492
Cow position: chrX:8925932-8925510 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 97

Conread position: 51-498
Cow position: chrX:12979582-12980032 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 107

Conread position: 52-233
Cow position: chrX:12197320-12197133 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 52-236
Cow position: chrX:26881829-26882018 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 52-253
Cow position: chrX:1101798-1101602 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 53, 18

Conread position: 52-266
Cow position: chrX:6389330-6389113 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 21, 116

Conread position: 52-278
Cow position: chrX:28068102-28067870 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 17, 0

Conread position: 52-279
Cow position: chrX:32877126-32877356 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 19, 99

Conread position: 52-294
Cow position: chrX:4559983-4559743 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 183
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 53, 19

Conread position: 52-297
Cow position: chrX:2936201-2935958 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 53, 13

Conread position: 52-440
Cow position: chrX:20677616-20677232 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 248

Conread position: 52-486
Cow position: chrX:28013187-28013629 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 256

Conread position: 52-500
Cow position: chrX:4632606-4633054 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 19

Conread position: 52-500
Cow position: chrX:25815650-25816099 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 15

Conread position: 52-500
Cow position: chrX:42492269-42492718 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 84

Conread position: 53-254
Cow position: chrX:42875457-42875256 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 49, 25

Conread position: 53-423
Cow position: chrX:9770436-9770801 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 254
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 11, 184

Conread position: 54-260
Cow position: chrX:31983332-31983547 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 25

Conread position: 54-268
Cow position: chrX:37867502-37867284 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 48, 203

Conread position: 54-284
Cow position: chrX:20957483-20957252 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 25

Conread position: 54-315
Cow position: chrX:35276235-35275969 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 221

Conread position: 54-368
Cow position: chrX:1087900-1088205 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 207
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 102

Conread position: 54-429
Cow position: chrX:34315776-34315396 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 297

Conread position: 54-499
Cow position: chrX:31729685-31729253 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 97

Conread position: 54-499
Cow position: chrX:41238110-41238568 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 97

Conread position: 55-436
Cow position: chrX:43050318-43049924 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 84

Conread position: 55-475
Cow position: chrX:36061407-36060973 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 119

Conread position: 56-228
Cow position: chrX:10154800-10154977 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 12, 153

Conread position: 56-256
Cow position: chrX:46533056-46533263 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 56-258
Cow position: chrX:23358873-23359071 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 23

Conread position: 56-300
Cow position: chrX:39290598-39290357 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 15

Conread position: 56-432
Cow position: chrX:48262853-48262475 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 245
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 12, 83

Conread position: 56-500
Cow position: chrX:7351545-7351096 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 23

Conread position: 56-500
Cow position: chrX:27442294-27442758 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 15

Conread position: 57-243
Cow position: chrX:4444672-4444476 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 20

Conread position: 57-254
Cow position: chrX:36468124-36468324 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 31

Conread position: 57-256
Cow position: chrX:45843347-45843552 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 45, 67

Conread position: 57-260
Cow position: chrX:14951108-14951315 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 57-269
Cow position: chrX:11781491-11781282 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 48, 28

Conread position: 57-270
Cow position: chrX:23136974-23136770 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 69, 15

Conread position: 57-278
Cow position: chrX:32747967-32747748 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 17, 32

Conread position: 57-301
Cow position: chrX:24633929-24633681 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 170, 22

Conread position: 57-311
Cow position: chrX:17704629-17704379 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 170
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 108, 50

Conread position: 57-333
Cow position: chrX:45391468-45391748 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 180
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 48, 269

Conread position: 57-336
Cow position: chrX:11325867-11326137 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 189
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 14

Conread position: 57-341
Cow position: chrX:27306685-27306410 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 194
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 52

Conread position: 57-348
Cow position: chrX:48198403-48198694 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 191
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 47, 70

Conread position: 57-385
Cow position: chrX:35590513-35590843 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 221
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 48, 128

Conread position: 57-412
Cow position: chrX:17949247-17949601 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 210

Conread position: 57-472
Cow position: chrX:27145844-27145447 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 292
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 23, 8

Conread position: 57-492
Cow position: chrX:16996741-16996311 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 271

Conread position: 57-492
Cow position: chrX:47484013-47484467 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 275

Conread position: 57-500
Cow position: chrX:9361127-9360680 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 303
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 48, 30

Conread position: 57-500
Cow position: chrX:27431679-27432122 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 382, 98

Conread position: 57-500
Cow position: chrX:31948689-31949134 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 303

Conread position: 58-243
Cow position: chrX:34193836-34194027 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 58-252
Cow position: chrX:40055983-40056171 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 58-252
Cow position: chrX:42461381-42461572 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 83

Conread position: 58-333
Cow position: chrX:45124644-45124368 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 177
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 104, 258

Conread position: 58-334
Cow position: chrX:17956933-17956660 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 168

Conread position: 58-441
Cow position: chrX:27945805-27946200 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 274

Conread position: 58-500
Cow position: chrX:11633927-11633475 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 58-500
Cow position: chrX:34441210-34441654 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 7

Conread position: 58-500
Cow position: chrX:41674339-41673900 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 14

Conread position: 59-336
Cow position: chrX:19660210-19660500 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 13

Conread position: 59-382
Cow position: chrX:16575343-16575040 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 238
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 12, 47

Conread position: 60-316
Cow position: chrX:27074809-27075066 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 45, 246

Conread position: 60-500
Cow position: chrX:4825606-4826031 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 79

Conread position: 60-500
Cow position: chrX:24365581-24366035 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 17

Conread position: 61-500
Cow position: chrX:37072626-37072202 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 299
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 50, 17

Conread position: 63-440
Cow position: chrX:34314261-34313894 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 104

Conread position: 63-498
Cow position: chrX:40035203-40035646 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 25

Conread position: 64-268
Cow position: chrX:2551317-2551121 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 7, 86

Conread position: 64-389
Cow position: chrX:29050480-29050157 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 226
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 41, 75

Conread position: 64-499
Cow position: chrX:9251925-9252380 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 226

Conread position: 65-206
Cow position: chrX:26367465-26367611 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 65-271
Cow position: chrX:1960188-1960396 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 32, 80

Conread position: 65-292
Cow position: chrX:38302051-38301815 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 39, 0

Conread position: 65-300
Cow position: chrX:30672148-30672398 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 190
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 40, 13

Conread position: 65-312
Cow position: chrX:3806914-3806670 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 20

Conread position: 65-333
Cow position: chrX:43116959-43116690 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 177
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 85

Conread position: 65-431
Cow position: chrX:43115388-43115021 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 252
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 18, 182

Conread position: 65-471
Cow position: chrX:15231422-15231832 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 255

Conread position: 65-486
Cow position: chrX:34565523-34565103 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 120

Conread position: 65-499
Cow position: chrX:11656316-11655886 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 101

Conread position: 65-500
Cow position: chrX:3654841-3654401 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 72

Conread position: 66-235
Cow position: chrX:231791-231955 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 66-254
Cow position: chrX:45412007-45412195 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 114

Conread position: 66-256
Cow position: chrX:16555989-16556175 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 13

Conread position: 66-367
Cow position: chrX:27460107-27459788 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 219
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 13, 247

Conread position: 66-499
Cow position: chrX:32330407-32329958 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 188

Conread position: 66-500
Cow position: chrX:42994832-42994411 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 86

Conread position: 67-212
Cow position: chrX:1996216-1996366 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 125
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 67-218
Cow position: chrX:17929233-17929081 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 98

Conread position: 67-224
Cow position: chrX:42506712-42506875 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 10

Conread position: 67-234
Cow position: chrX:3494815-3494981 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 36, 98

Conread position: 67-234
Cow position: chrX:11670922-11670751 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 162

Conread position: 67-247
Cow position: chrX:1396356-1396167 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 67-249
Cow position: chrX:17525643-17525818 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 67-252
Cow position: chrX:37867668-37867477 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 35, 0

Conread position: 67-254
Cow position: chrX:597243-597430 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 36, 142

Conread position: 67-254
Cow position: chrX:6640659-6640471 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 111

Conread position: 67-261
Cow position: chrX:11589132-11589329 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 192

Conread position: 67-261
Cow position: chrX:32215464-32215267 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 34, 175

Conread position: 67-261
Cow position: chrX:37751876-37752069 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 155
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 38, 70

Conread position: 67-262
Cow position: chrX:8759858-8759662 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 38, 149

Conread position: 67-262
Cow position: chrX:41435307-41435513 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 67-269
Cow position: chrX:2314383-2314590 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 162
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 38, 0

Conread position: 67-270
Cow position: chrX:5097560-5097771 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 35, 11

Conread position: 67-271
Cow position: chrX:11454409-11454213 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 38, 72

Conread position: 67-274
Cow position: chrX:51668-51872 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 10

Conread position: 67-287
Cow position: chrX:19356699-19356480 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 155

Conread position: 67-290
Cow position: chrX:16323781-16324006 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 36, 11

Conread position: 67-292
Cow position: chrX:19018594-19018825 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 35, 10

Conread position: 67-295
Cow position: chrX:17524149-17524381 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 177
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 38, 10

Conread position: 67-296
Cow position: chrX:24170490-24170727 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 146

Conread position: 67-305
Cow position: chrX:16984870-16984634 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 68

Conread position: 67-306
Cow position: chrX:38587611-38587851 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 75, 10

Conread position: 67-339
Cow position: chrX:43150666-43150380 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 117

Conread position: 67-348
Cow position: chrX:22392754-22393035 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 38, 11

Conread position: 67-348
Cow position: chrX:44859627-44859910 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 187
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 36, 253

Conread position: 67-348
Cow position: chrX:44954729-44954445 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 184
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 38, 260

Conread position: 67-348
Cow position: chrX:46793515-46793793 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 196
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 39, 75

Conread position: 67-354
Cow position: chrX:44339086-44339379 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 176

Conread position: 67-362
Cow position: chrX:25037227-25036924 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 244

Conread position: 67-366
Cow position: chrX:48004081-48003780 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 199
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 239

Conread position: 67-389
Cow position: chrX:7648178-7648491 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 228
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 38, 10

Conread position: 67-389
Cow position: chrX:47991827-47991504 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 219
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 56

Conread position: 67-392
Cow position: chrX:13147219-13146891 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 237
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 30, 149

Conread position: 67-402
Cow position: chrX:21328149-21327802 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 67-414
Cow position: chrX:38654197-38654543 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 160

Conread position: 67-415
Cow position: chrX:42927595-42927933 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 242
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 38, 58

Conread position: 67-417
Cow position: chrX:24332012-24331662 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 227

Conread position: 67-418
Cow position: chrX:4296589-4296945 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 248
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 38, 227

Conread position: 67-418
Cow position: chrX:26881327-26881685 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 56

Conread position: 67-419
Cow position: chrX:40320641-40320287 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 17

Conread position: 67-440
Cow position: chrX:18204231-18204602 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 47

Conread position: 67-447
Cow position: chrX:20584546-20584177 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 10

Conread position: 67-469
Cow position: chrX:6407779-6407376 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 162

Conread position: 67-479
Cow position: chrX:32821276-32820847 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 202

Conread position: 67-482
Cow position: chrX:161635-161236 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 75

Conread position: 67-489
Cow position: chrX:45110885-45110463 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 287
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 35, 10

Conread position: 67-491
Cow position: chrX:25035146-25035582 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 240

Conread position: 67-497
Cow position: chrX:27175235-27174795 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 185

Conread position: 67-499
Cow position: chrX:7278141-7277717 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 41

Conread position: 67-499
Cow position: chrX:9201778-9201344 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 76

Conread position: 67-499
Cow position: chrX:22813300-22812858 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 202

Conread position: 67-499
Cow position: chrX:38964331-38963904 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 10

Conread position: 67-499
Cow position: chrX:41878702-41879137 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 41

Conread position: 67-500
Cow position: chrX:21642246-21642682 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 230

Conread position: 67-500
Cow position: chrX:31442604-31443025 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 83

Conread position: 67-500
Cow position: chrX:41123280-41122868 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 79

Conread position: 68-246
Cow position: chrX:41166596-41166773 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 35, 10

Conread position: 68-256
Cow position: chrX:42760486-42760294 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 37, 10

Conread position: 68-258
Cow position: chrX:27415355-27415540 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 13

Conread position: 68-270
Cow position: chrX:34398550-34398756 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 36, 9

Conread position: 68-274
Cow position: chrX:32867104-32866899 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 142
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 37, 84

Conread position: 68-285
Cow position: chrX:753396-753165 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 68-295
Cow position: chrX:24054894-24054674 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 192, 9

Conread position: 68-299
Cow position: chrX:34420970-34420733 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 178
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 37, 0

Conread position: 68-321
Cow position: chrX:25412153-25411884 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 132

Conread position: 68-335
Cow position: chrX:28940478-28940210 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 37, 92

Conread position: 68-397
Cow position: chrX:34836839-34837150 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 224
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 34, 9

Conread position: 68-441
Cow position: chrX:41871290-41870933 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 264
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 36, 9

Conread position: 68-468
Cow position: chrX:34792091-34792482 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 11

Conread position: 68-498
Cow position: chrX:35269090-35268689 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 72

Conread position: 68-498
Cow position: chrX:36976182-36975748 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 33

Conread position: 68-499
Cow position: chrX:40567839-40567397 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 201

Conread position: 68-500
Cow position: chrX:152139-151698 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 125

Conread position: 68-500
Cow position: chrX:5118264-5118688 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 243

Conread position: 68-500
Cow position: chrX:15006925-15007354 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 70

Conread position: 68-500
Cow position: chrX:22624693-22624278 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 9

Conread position: 68-500
Cow position: chrX:32019899-32020325 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 199

Conread position: 68-500
Cow position: chrX:33854993-33855436 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 9

Conread position: 69-212
Cow position: chrX:42314656-42314806 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 69-235
Cow position: chrX:16801034-16801200 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 135

Conread position: 69-258
Cow position: chrX:10279108-10278904 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 69-258
Cow position: chrX:16412048-16412242 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 69-268
Cow position: chrX:37749761-37749953 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 158, 18

Conread position: 69-278
Cow position: chrX:41454720-41454934 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 69-287
Cow position: chrX:35392072-35392283 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 37, 69

Conread position: 69-293
Cow position: chrX:1122314-1122538 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 173

Conread position: 69-295
Cow position: chrX:24335843-24336074 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 69-300
Cow position: chrX:17293189-17292952 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 69-300
Cow position: chrX:42331505-42331276 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 193, 8

Conread position: 69-348
Cow position: chrX:47013168-47013450 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 187
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 247

Conread position: 69-366
Cow position: chrX:13122177-13121863 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 69-389
Cow position: chrX:42855696-42855365 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 282

Conread position: 69-414
Cow position: chrX:29230240-29229896 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 245
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 36, 185

Conread position: 69-432
Cow position: chrX:40685096-40685462 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 318

Conread position: 69-436
Cow position: chrX:11614908-11614564 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 69-436
Cow position: chrX:29723984-29723606 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 114

Conread position: 69-472
Cow position: chrX:18486036-18485619 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 288
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 33, 107

Conread position: 69-500
Cow position: chrX:9634959-9635384 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 172

Conread position: 69-500
Cow position: chrX:14973523-14973938 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 78

Conread position: 69-500
Cow position: chrX:29541996-29542422 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 9

Conread position: 69-500
Cow position: chrX:38094293-38094729 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 93

Conread position: 69-500
Cow position: chrX:39938305-39938726 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 79

Conread position: 70-231
Cow position: chrX:6480363-6480530 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 70-237
Cow position: chrX:26720458-26720623 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 155, 67

Conread position: 70-269
Cow position: chrX:40649135-40648923 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 10, 203

Conread position: 70-306
Cow position: chrX:4289666-4289435 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 76

Conread position: 70-348
Cow position: chrX:44201813-44202094 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 181
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 35, 267

Conread position: 70-491
Cow position: chrX:38218946-38218512 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 96

Conread position: 70-492
Cow position: chrX:22822285-22821852 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 22

Conread position: 70-499
Cow position: chrX:12250047-12249604 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 66

Conread position: 70-501
Cow position: chrX:8900248-8899820 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 292
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 96, 145

Conread position: 71-257
Cow position: chrX:27416326-27416134 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 157

Conread position: 71-273
Cow position: chrX:14925504-14925303 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 171

Conread position: 71-282
Cow position: chrX:20583891-20583682 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 92, 0

Conread position: 71-290
Cow position: chrX:35285405-35285181 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 0

Conread position: 71-301
Cow position: chrX:27668731-27668961 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 34, 54

Conread position: 71-331
Cow position: chrX:41941854-41941594 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 198
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 34, 65

Conread position: 71-336
Cow position: chrX:19394786-19394515 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 71-343
Cow position: chrX:36391957-36392232 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 34, 85

Conread position: 71-356
Cow position: chrX:40108282-40108573 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 34, 115

Conread position: 71-382
Cow position: chrX:19469284-19469589 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 211
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 69

Conread position: 71-382
Cow position: chrX:22115083-22115401 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 219
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 249

Conread position: 71-390
Cow position: chrX:10859082-10859389 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 217
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 34, 76

Conread position: 71-437
Cow position: chrX:35822562-35822206 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 79

Conread position: 71-437
Cow position: chrX:41027391-41027021 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 322

Conread position: 71-491
Cow position: chrX:15485402-15485821 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 220

Conread position: 71-491
Cow position: chrX:29601597-29602027 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 324

Conread position: 71-492
Cow position: chrX:31250621-31250194 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 326

Conread position: 71-499
Cow position: chrX:16762999-16762570 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 68

Conread position: 71-500
Cow position: chrX:21663526-21663106 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 232

Conread position: 71-501
Cow position: chrX:10251971-10252386 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 299
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 34, 88

Conread position: 72-205
Cow position: chrX:10479980-10479842 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 116
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 72-236
Cow position: chrX:11602257-11602421 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 65, 151

Conread position: 72-236
Cow position: chrX:23485760-23485583 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 72-241
Cow position: chrX:5915421-5915245 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 72-254
Cow position: chrX:6634575-6634388 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 72-254
Cow position: chrX:28850943-28850771 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 72-261
Cow position: chrX:27270599-27270412 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 132, 41

Conread position: 72-293
Cow position: chrX:756150-755932 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 85, 36

Conread position: 72-301
Cow position: chrX:40337141-40336908 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 33, 170

Conread position: 72-316
Cow position: chrX:32910327-32910085 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 34, 79

Conread position: 72-319
Cow position: chrX:42432284-42432532 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 33, 77

Conread position: 72-362
Cow position: chrX:296622-296332 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 212
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 36, 161

Conread position: 72-374
Cow position: chrX:36866403-36866096 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 126

Conread position: 72-386
Cow position: chrX:6559226-6559532 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 126

Conread position: 72-389
Cow position: chrX:38560779-38560467 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 206
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 32, 6

Conread position: 72-390
Cow position: chrX:31515403-31515078 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 69

Conread position: 72-396
Cow position: chrX:1466393-1466063 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 219
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 33, 98

Conread position: 72-414
Cow position: chrX:9650796-9651138 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 87

Conread position: 72-436
Cow position: chrX:36393111-36393482 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 255
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 33, 155

Conread position: 72-474
Cow position: chrX:47186096-47186498 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 123

Conread position: 72-485
Cow position: chrX:36356334-36355934 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 132

Conread position: 72-485
Cow position: chrX:46032499-46032910 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 6

Conread position: 72-492
Cow position: chrX:14883727-14884157 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 79

Conread position: 72-492
Cow position: chrX:29544657-29545075 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 11

Conread position: 72-498
Cow position: chrX:1499884-1499468 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 97

Conread position: 72-499
Cow position: chrX:27393789-27394216 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 6

Conread position: 72-500
Cow position: chrX:22075025-22074597 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 52

Conread position: 72-500
Cow position: chrX:45968367-45967960 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 33

Conread position: 73-234
Cow position: chrX:9451570-9451409 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 74

Conread position: 73-254
Cow position: chrX:41990895-41991090 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 32, 5

Conread position: 73-267
Cow position: chrX:16763701-16763894 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 30, 83

Conread position: 73-268
Cow position: chrX:4092151-4091954 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 153
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 84, 0

Conread position: 73-317
Cow position: chrX:17966553-17966325 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 201, 32

Conread position: 73-336
Cow position: chrX:18964605-18964862 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 68, 29

Conread position: 73-365
Cow position: chrX:5063465-5063187 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 127

Conread position: 73-387
Cow position: chrX:27261419-27261100 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 73-447
Cow position: chrX:25207632-25207988 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 67

Conread position: 73-459
Cow position: chrX:47279707-47280088 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 267
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 32, 110

Conread position: 73-468
Cow position: chrX:4399347-4398954 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 101

Conread position: 73-490
Cow position: chrX:45502364-45501955 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 56

Conread position: 73-498
Cow position: chrX:36283569-36283144 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 113

Conread position: 73-500
Cow position: chrX:2301151-2300730 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 5

Conread position: 73-500
Cow position: chrX:9425533-9425945 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 49

Conread position: 73-500
Cow position: chrX:21593520-21593080 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 171

Conread position: 73-500
Cow position: chrX:28846664-28847082 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 12

Conread position: 73-500
Cow position: chrX:38549676-38549245 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 236

Conread position: 74-223
Cow position: chrX:3543093-3542931 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 74-248
Cow position: chrX:12971-12800 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 31, 77

Conread position: 74-257
Cow position: chrX:8642273-8642087 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 148
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 31, 141

Conread position: 74-293
Cow position: chrX:46068536-46068754 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 18

Conread position: 74-298
Cow position: chrX:11762783-11763001 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 28, 70

Conread position: 74-300
Cow position: chrX:23335747-23335974 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 31, 165

Conread position: 74-361
Cow position: chrX:4109413-4109128 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 207

Conread position: 74-367
Cow position: chrX:22284067-22283764 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 31, 186

Conread position: 74-370
Cow position: chrX:38321155-38321458 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 31, 248

Conread position: 74-387
Cow position: chrX:40680843-40680523 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 74-451
Cow position: chrX:23562101-23561723 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 279
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 31, 240

Conread position: 74-489
Cow position: chrX:8869176-8869601 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 91

Conread position: 74-500
Cow position: chrX:37489957-37489527 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 125

Conread position: 74-500
Cow position: chrX:42380884-42381303 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 220

Conread position: 75-293
Cow position: chrX:19761976-19761759 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 30, 65

Conread position: 75-300
Cow position: chrX:29478949-29478722 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 174
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 28, 166

Conread position: 75-305
Cow position: chrX:11653994-11653755 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 90

Conread position: 75-343
Cow position: chrX:4645687-4645956 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 230

Conread position: 76-400
Cow position: chrX:10516480-10516157 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 285

Conread position: 76-416
Cow position: chrX:46023001-46022673 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 229
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 29, 173

Conread position: 77-229
Cow position: chrX:28107071-28106916 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 77-232
Cow position: chrX:48574129-48574291 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 77-246
Cow position: chrX:22552754-22552927 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 28, 0

Conread position: 77-258
Cow position: chrX:876622-876802 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 53

Conread position: 77-284
Cow position: chrX:3494596-3494808 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 77-336
Cow position: chrX:48558971-48558710 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 28, 48

Conread position: 77-408
Cow position: chrX:13924086-13923764 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 232
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 26, 89

Conread position: 77-433
Cow position: chrX:20168780-20168425 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 99

Conread position: 77-491
Cow position: chrX:34554949-34554534 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 212

Conread position: 77-492
Cow position: chrX:27508799-27509215 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 112

Conread position: 78-268
Cow position: chrX:4612650-4612852 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 59, 112

Conread position: 78-437
Cow position: chrX:21986077-21986428 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 246
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 27, 69

Conread position: 78-462
Cow position: chrX:14275527-14275901 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 259
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 220, 70

Conread position: 78-482
Cow position: chrX:35382818-35383205 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 75

Conread position: 78-492
Cow position: chrX:44397235-44396819 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 140

Conread position: 78-494
Cow position: chrX:46532266-46532707 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 78-499
Cow position: chrX:38642466-38642055 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 30

Conread position: 78-500
Cow position: chrX:17795203-17794782 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 15

Conread position: 79-219
Cow position: chrX:37717945-37717801 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 26, 132

Conread position: 79-258
Cow position: chrX:45759892-45759711 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 87

Conread position: 79-486
Cow position: chrX:31489744-31489322 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 253

Conread position: 79-500
Cow position: chrX:42589532-42589961 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 271
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 92

Conread position: 80-500
Cow position: chrX:12309163-12309593 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 246

Conread position: 81-457
Cow position: chrX:45875611-45875241 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 224

Conread position: 82-500
Cow position: chrX:20152068-20151647 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 59

Conread position: 83-387
Cow position: chrX:20881742-20882025 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 229
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 20, 62

Conread position: 85-284
Cow position: chrX:30824202-30824001 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 62

Conread position: 85-460
Cow position: chrX:5679713-5680093 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 255
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 19, 274

Conread position: 85-492
Cow position: chrX:34238940-34238525 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 283

Conread position: 86-501
Cow position: chrX:28877953-28878364 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 216

Conread position: 87-226
Cow position: chrX:11813289-11813145 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 87-248
Cow position: chrX:10237698-10237863 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 84

Conread position: 87-248
Cow position: chrX:39094118-39094273 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 149, 50

Conread position: 87-258
Cow position: chrX:31986357-31986534 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 87-271
Cow position: chrX:48822127-48822313 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 15, 179

Conread position: 87-289
Cow position: chrX:28837099-28836903 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 120

Conread position: 87-292
Cow position: chrX:41809960-41810161 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 18, 53

Conread position: 87-361
Cow position: chrX:44702850-44703134 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 209
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 17, 213

Conread position: 87-373
Cow position: chrX:38208339-38208617 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 208
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 18, 42

Conread position: 87-436
Cow position: chrX:48646394-48646735 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 221
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 18, 47

Conread position: 87-441
Cow position: chrX:30840756-30840416 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 257
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 18, 53

Conread position: 87-454
Cow position: chrX:27228344-27227966 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 215

Conread position: 87-499
Cow position: chrX:4768943-4768548 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 67

Conread position: 87-499
Cow position: chrX:10831266-10831699 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 126

Conread position: 87-499
Cow position: chrX:30922387-30921983 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 200

Conread position: 87-500
Cow position: chrX:8731309-8730876 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 88-316
Cow position: chrX:42282791-42282559 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 16, 125

Conread position: 88-317
Cow position: chrX:42836395-42836166 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 210

Conread position: 88-475
Cow position: chrX:31252613-31252239 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 17

Conread position: 88-499
Cow position: chrX:34503133-34502716 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 217

Conread position: 88-500
Cow position: chrX:34544000-34543584 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 249

Conread position: 89-275
Cow position: chrX:47378917-47379096 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 16, 50

Conread position: 89-500
Cow position: chrX:1615845-1616251 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 45

Conread position: 90-268
Cow position: chrX:36722601-36722773 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 63

Conread position: 90-310
Cow position: chrX:29733377-29733603 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 18

Conread position: 90-413
Cow position: chrX:34222922-34222598 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 116

Conread position: 91-312
Cow position: chrX:20677938-20678152 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 5, 47

Conread position: 91-500
Cow position: chrX:842366-841955 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 31

Conread position: 92-500
Cow position: chrX:35543094-35542688 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 73

Conread position: 93-405
Cow position: chrX:29938300-29937983 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 217
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 15, 44

Conread position: 94-327
Cow position: chrX:32318506-32318275 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 152, 43

Conread position: 94-494
Cow position: chrX:46770754-46771168 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 89

Conread position: 98-472
Cow position: chrX:169340-169701 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 157

Conread position: 100-473
Cow position: chrX:47165685-47166061 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 256
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 65, 207

Conread position: 101-252
Cow position: chrX:25048904-25049058 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 111
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 141, 0

Conread position: 101-344
Cow position: chrX:48121007-48121244 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 204, 46

Conread position: 101-366
Cow position: chrX:19965197-19965469 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 182
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 64, 0

Conread position: 101-374
Cow position: chrX:126954-126694 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 199, 18

Conread position: 101-379
Cow position: chrX:39220284-39220000 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 209

Conread position: 101-390
Cow position: chrX:47246561-47246838 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 193
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 64

Conread position: 101-412
Cow position: chrX:4991826-4992127 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 61, 105

Conread position: 101-460
Cow position: chrX:41068918-41068564 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 46

Conread position: 101-492
Cow position: chrX:31294371-31294739 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 198

Conread position: 101-499
Cow position: chrX:1055183-1055592 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 280

Conread position: 101-500
Cow position: chrX:13868902-13868490 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 174

Conread position: 102-478
Cow position: chrX:7337040-7336645 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 237

Conread position: 103-309
Cow position: chrX:11859340-11859548 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 54, 114

Conread position: 103-335
Cow position: chrX:23188593-23188813 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 45, 0

Conread position: 105-399
Cow position: chrX:40283317-40283027 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 213
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 52, 128

Conread position: 106-492
Cow position: chrX:34662653-34663039 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 85

Conread position: 107-249
Cow position: chrX:40543336-40543472 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 108-395
Cow position: chrX:23113474-23113181 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 191, 58

Conread position: 109-498
Cow position: chrX:47046323-47046721 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 126

Conread position: 109-500
Cow position: chrX:28865814-28866196 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 132

Conread position: 113-488
Cow position: chrX:2786371-2786740 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 254
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 16, 24

Conread position: 115-436
Cow position: chrX:7710355-7710678 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 35

Conread position: 120-487
Cow position: chrX:32431806-32431436 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 262
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 7, 61

Conread position: 121-440
Cow position: chrX:9365499-9365813 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 0

Conread position: 122-296
Cow position: chrX:35939662-35939843 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 122-475
Cow position: chrX:24287756-24288111 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 258
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 53, 141

Conread position: 122-497
Cow position: chrX:4515865-4515467 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 40

Conread position: 122-500
Cow position: chrX:16416680-16416305 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 66

Conread position: 124-500
Cow position: chrX:25338363-25337976 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 55

Conread position: 127-500
Cow position: chrX:42171125-42171503 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 44

Conread position: 128-341
Cow position: chrX:29553458-29553243 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 30, 201

Conread position: 128-357
Cow position: chrX:25788737-25788954 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 197, 38

Conread position: 128-500
Cow position: chrX:5017253-5017611 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 26

Conread position: 130-274
Cow position: chrX:37062416-37062561 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 130-290
Cow position: chrX:25459562-25459726 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 18

Conread position: 130-300
Cow position: chrX:18046564-18046399 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 130-385
Cow position: chrX:23562797-23562549 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 166, 10

Conread position: 130-492
Cow position: chrX:33640145-33639776 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 152

Conread position: 131-300
Cow position: chrX:38722286-38722119 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 23

Conread position: 131-331
Cow position: chrX:35759767-35759971 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 131-351
Cow position: chrX:43426464-43426240 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 131-436
Cow position: chrX:39415200-39415503 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 14, 164

Conread position: 131-489
Cow position: chrX:10959227-10959593 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 241

Conread position: 131-489
Cow position: chrX:39126495-39126144 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 169

Conread position: 131-498
Cow position: chrX:17630632-17631004 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 238

Conread position: 131-500
Cow position: chrX:1503496-1503135 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 120

Conread position: 131-500
Cow position: chrX:7646425-7646057 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 170

Conread position: 131-500
Cow position: chrX:17042851-17042487 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 262
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 14, 48

Conread position: 131-500
Cow position: chrX:17662432-17662800 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 18

Conread position: 131-500
Cow position: chrX:42011450-42011076 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 258
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 14, 153

Conread position: 131-500
Cow position: chrX:45414142-45414503 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 247
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 298, 21

Conread position: 132-487
Cow position: chrX:3488723-3489075 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 243
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 25, 130

Conread position: 132-490
Cow position: chrX:14599700-14599336 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 47

Conread position: 133-285
Cow position: chrX:47342280-47342129 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 112, 0

Conread position: 133-300
Cow position: chrX:21665077-21665243 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 93, 23

Conread position: 133-365
Cow position: chrX:15820759-15820531 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 92, 0

Conread position: 133-400
Cow position: chrX:45883804-45884079 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 27, 218

Conread position: 133-412
Cow position: chrX:29194395-29194123 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 92

Conread position: 133-491
Cow position: chrX:27771803-27772154 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 88

Conread position: 133-497
Cow position: chrX:17726141-17725774 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 252

Conread position: 133-500
Cow position: chrX:7718997-7718651 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 45

Conread position: 133-500
Cow position: chrX:32623733-32623379 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 258
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 173, 30

Conread position: 134-300
Cow position: chrX:31829299-31829463 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 28, 0

Conread position: 134-356
Cow position: chrX:11593831-11594060 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 125, 177

Conread position: 134-430
Cow position: chrX:45099292-45098992 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 163, 0

Conread position: 134-499
Cow position: chrX:6690096-6690450 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 0

Conread position: 134-500
Cow position: chrX:28134504-28134142 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 80

Conread position: 135-500
Cow position: chrX:42588495-42588874 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 252
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 101, 144

Conread position: 136-247
Cow position: chrX:7107663-7107553 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 136-270
Cow position: chrX:23574815-23574683 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 136-288
Cow position: chrX:27667588-27667443 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 7, 124

Conread position: 136-326
Cow position: chrX:20743767-20743575 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 155
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 29, 0

Conread position: 136-378
Cow position: chrX:41270824-41271077 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 188
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 153, 0

Conread position: 136-384
Cow position: chrX:32977924-32978161 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 136-388
Cow position: chrX:33204807-33205053 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 162, 0

Conread position: 136-403
Cow position: chrX:16348411-16348672 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 20

Conread position: 136-404
Cow position: chrX:37129433-37129161 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 225

Conread position: 136-418
Cow position: chrX:27119854-27119582 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 68, 0

Conread position: 136-436
Cow position: chrX:11084903-11085192 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 136-440
Cow position: chrX:616098-616401 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 20

Conread position: 136-446
Cow position: chrX:29680102-29680404 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 136-481
Cow position: chrX:36068177-36067835 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 17

Conread position: 136-485
Cow position: chrX:42235361-42235722 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 253

Conread position: 136-487
Cow position: chrX:23785808-23785463 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 20

Conread position: 136-488
Cow position: chrX:43730064-43730406 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 27

Conread position: 136-491
Cow position: chrX:13382485-13382131 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 27

Conread position: 136-492
Cow position: chrX:11454885-11455249 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 81

Conread position: 136-492
Cow position: chrX:27516684-27516337 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 74

Conread position: 136-492
Cow position: chrX:34402169-34401802 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 156

Conread position: 136-492
Cow position: chrX:38006610-38006963 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 14

Conread position: 136-497
Cow position: chrX:4043705-4044051 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 101

Conread position: 136-499
Cow position: chrX:3154081-3154449 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 256
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 50, 8

Conread position: 136-499
Cow position: chrX:38853360-38852994 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 96

Conread position: 136-500
Cow position: chrX:618848-619211 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 20

Conread position: 136-500
Cow position: chrX:38226948-38227293 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 57

Conread position: 136-500
Cow position: chrX:40269654-40269273 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 257

Conread position: 137-276
Cow position: chrX:40355192-40355057 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 137-465
Cow position: chrX:6259987-6260323 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 112

Conread position: 138-397
Cow position: chrX:29549392-29549644 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 193
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 166, 18

Conread position: 138-500
Cow position: chrX:40557520-40557879 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 15

Conread position: 140-300
Cow position: chrX:6222971-6223130 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 140-500
Cow position: chrX:878222-878575 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 212

Conread position: 140-500
Cow position: chrX:23513866-23514221 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 16

Conread position: 140-500
Cow position: chrX:31373694-31373370 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 259
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 122, 0

Conread position: 140-501
Cow position: chrX:17888265-17888610 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 141-356
Cow position: chrX:31626820-31627038 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 18, 91

Conread position: 141-499
Cow position: chrX:11717626-11717985 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 233

Conread position: 141-499
Cow position: chrX:29121204-29120854 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 0

Conread position: 143-430
Cow position: chrX:38728891-38728608 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 140

Conread position: 144-284
Cow position: chrX:23266568-23266429 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 103
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 144-432
Cow position: chrX:42873539-42873261 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 217
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 58, 96

Conread position: 144-457
Cow position: chrX:23667274-23666965 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 211
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 40, 20

Conread position: 144-492
Cow position: chrX:37836734-37836392 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 83

Conread position: 144-498
Cow position: chrX:8797403-8797046 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 99

Conread position: 144-500
Cow position: chrX:6265443-6265789 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 92

Conread position: 144-500
Cow position: chrX:45113776-45113425 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 158

Conread position: 144-501
Cow position: chrX:20697455-20697812 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 158

Conread position: 144-501
Cow position: chrX:23092025-23091677 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 184

Conread position: 145-487
Cow position: chrX:31312182-31311835 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 196

Conread position: 145-498
Cow position: chrX:7497391-7497042 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 251
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 38, 8

Conread position: 146-497
Cow position: chrX:38066300-38066641 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 236
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 183

Conread position: 149-500
Cow position: chrX:42469791-42470140 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 181

Conread position: 150-469
Cow position: chrX:46433640-46433310 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 153

Conread position: 150-492
Cow position: chrX:5900610-5900262 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 90

Conread position: 150-500
Cow position: chrX:30543135-30543490 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 243

Conread position: 151-500
Cow position: chrX:32170740-32171085 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 88

Conread position: 151-500
Cow position: chrX:43527655-43527300 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 138

Conread position: 155-305
Cow position: chrX:38725951-38725801 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 143, 95

Conread position: 155-349
Cow position: chrX:29115847-29115661 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 35, 11

Conread position: 155-489
Cow position: chrX:23583704-23583366 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 243
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 159, 139

Conread position: 155-501
Cow position: chrX:29289721-29289372 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 143

Conread position: 156-368
Cow position: chrX:19097077-19097291 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 94, 66

Conread position: 156-440
Cow position: chrX:45459182-45458894 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 192
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 108, 94

Conread position: 156-489
Cow position: chrX:17964378-17964715 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 234
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 134

Conread position: 156-499
Cow position: chrX:11073049-11073391 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 142

Conread position: 156-500
Cow position: chrX:678432-678771 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 242
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 140, 59

Conread position: 157-333
Cow position: chrX:27413652-27413476 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 137, 124

Conread position: 157-382
Cow position: chrX:15233125-15233347 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 12

Conread position: 157-411
Cow position: chrX:45670363-45670117 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 69, 161

Conread position: 157-430
Cow position: chrX:6041068-6041341 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 158, 238

Conread position: 157-440
Cow position: chrX:48385228-48385499 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 231, 48

Conread position: 157-489
Cow position: chrX:24259441-24259774 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 233
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 73, 34

Conread position: 157-500
Cow position: chrX:15305155-15305491 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 235
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 71, 47

Conread position: 157-500
Cow position: chrX:15815223-15814894 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 157-500
Cow position: chrX:17542100-17541760 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 37

Conread position: 157-500
Cow position: chrX:20801910-20801576 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 240
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 271, 145

Conread position: 157-500
Cow position: chrX:45174991-45174641 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 235
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 151, 210

Conread position: 158-279
Cow position: chrX:10076111-10075992 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 158-330
Cow position: chrX:10305211-10305379 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 158-354
Cow position: chrX:46429679-46429875 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 151, 184

Conread position: 158-497
Cow position: chrX:43779712-43780053 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 33

Conread position: 158-500
Cow position: chrX:4865370-4865048 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 245
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 142, 17

Conread position: 159-348
Cow position: chrX:19943097-19943286 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 150
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 140, 61

Conread position: 159-378
Cow position: chrX:22914903-22915115 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 48, 0

Conread position: 159-386
Cow position: chrX:36514753-36514981 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 159-492
Cow position: chrX:3130711-3130386 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 144

Conread position: 159-492
Cow position: chrX:41884273-41884613 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 228

Conread position: 159-498
Cow position: chrX:9416545-9416894 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 111

Conread position: 159-500
Cow position: chrX:37119731-37119396 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 15

Conread position: 160-333
Cow position: chrX:47514498-47514669 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 142, 0

Conread position: 160-405
Cow position: chrX:48044378-48044618 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 26, 0

Conread position: 160-420
Cow position: chrX:5679434-5679685 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 160-500
Cow position: chrX:24132011-24132354 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 231
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 6, 50

Conread position: 160-500
Cow position: chrX:47054387-47054730 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 78

Conread position: 161-489
Cow position: chrX:10411847-10412181 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 138

Conread position: 162-497
Cow position: chrX:917232-917572 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 111

Conread position: 162-500
Cow position: chrX:11082486-11082817 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 177

Conread position: 163-500
Cow position: chrX:488639-488286 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 244
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 95, 239

Conread position: 164-300
Cow position: chrX:16830354-16830222 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 164-445
Cow position: chrX:19273573-19273867 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 140, 240

Conread position: 166-365
Cow position: chrX:12082192-12082391 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 137, 72

Conread position: 166-437
Cow position: chrX:16055360-16055075 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 33, 171

Conread position: 166-489
Cow position: chrX:39545850-39546166 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 220
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 259, 25

Conread position: 166-499
Cow position: chrX:7162188-7161868 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 79

Conread position: 166-500
Cow position: chrX:37232539-37232206 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 120

Conread position: 166-500
Cow position: chrX:39558217-39558550 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 46

Conread position: 166-500
Cow position: chrX:47481928-47481596 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 72

Conread position: 167-496
Cow position: chrX:37574971-37574656 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 231
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 327, 119

Conread position: 167-500
Cow position: chrX:1514288-1514604 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 167-500
Cow position: chrX:42587290-42587632 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 232
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 133, 227

Conread position: 168-489
Cow position: chrX:35926088-35925772 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 219
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 16, 42

Conread position: 168-499
Cow position: chrX:7572037-7571704 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 224

Conread position: 168-500
Cow position: chrX:19690345-19690014 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 111

Conread position: 170-292
Cow position: chrX:37665819-37665697 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 170-491
Cow position: chrX:35224424-35224105 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 132

Conread position: 170-500
Cow position: chrX:18694803-18695123 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 66

Conread position: 170-500
Cow position: chrX:37910574-37910249 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 164

Conread position: 170-501
Cow position: chrX:42498923-42499233 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 235
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 129, 14

Conread position: 171-397
Cow position: chrX:19162214-19162437 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 150
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 138, 0

Conread position: 173-279
Cow position: chrX:25211053-25210948 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 173-457
Cow position: chrX:22453973-22454250 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 207
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 216, 65

Conread position: 175-401
Cow position: chrX:44090900-44090672 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 153
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 151, 6

Conread position: 175-417
Cow position: chrX:45064814-45065048 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 214, 6

Conread position: 175-429
Cow position: chrX:45005746-45005502 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 122, 6

Conread position: 175-462
Cow position: chrX:44837098-44836829 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 123, 6

Conread position: 175-475
Cow position: chrX:16514143-16514443 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 8, 31

Conread position: 175-491
Cow position: chrX:47302755-47303074 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 227
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 214, 6

Conread position: 175-491
Cow position: chrX:48652599-48652921 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 6

Conread position: 175-492
Cow position: chrX:45149290-45148979 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 229
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 213, 6

Conread position: 175-492
Cow position: chrX:47300781-47301099 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 225
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 215, 6

Conread position: 175-500
Cow position: chrX:9041120-9041433 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 227
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 10, 124

Conread position: 175-500
Cow position: chrX:28111633-28111303 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 234
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 39

Conread position: 175-500
Cow position: chrX:44834674-44835019 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 241
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 80, 6

Conread position: 175-500
Cow position: chrX:45403703-45404037 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 6

Conread position: 175-500
Cow position: chrX:46722612-46722944 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 6

Conread position: 175-500
Cow position: chrX:48194913-48195244 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 6

Conread position: 175-501
Cow position: chrX:26625548-26625881 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 183

Conread position: 176-500
Cow position: chrX:6674792-6675128 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 225
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 7, 18

Conread position: 176-500
Cow position: chrX:43049453-43049141 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 245
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 34, 63

Conread position: 177-492
Cow position: chrX:21004806-21004486 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 167

Conread position: 177-500
Cow position: chrX:2468006-2467676 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 116

Conread position: 177-500
Cow position: chrX:11856551-11856226 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 171

Conread position: 178-500
Cow position: chrX:40692631-40692941 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 230
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 127, 198

Conread position: 179-348
Cow position: chrX:48652457-48652624 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 6, 143

Conread position: 179-500
Cow position: chrX:47967726-47967396 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 229
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 121, 0

Conread position: 182-492
Cow position: chrX:38936816-38936505 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 74

Conread position: 182-499
Cow position: chrX:29032526-29032212 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 225
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 106, 22

Conread position: 183-365
Cow position: chrX:44954463-44954280 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 155, 0

Conread position: 184-294
Cow position: chrX:35278443-35278333 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 185-432
Cow position: chrX:21566520-21566271 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 209

Conread position: 186-500
Cow position: chrX:26440676-26440983 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 12

Conread position: 187-500
Cow position: chrX:13322876-13323200 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 215
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 82, 192

Conread position: 189-499
Cow position: chrX:27680507-27680199 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 167

Conread position: 194-436
Cow position: chrX:27685353-27685112 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 109

Conread position: 198-491
Cow position: chrX:44873461-44873745 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 102, 42

Conread position: 202-484
Cow position: chrX:45993326-45993031 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 223
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 20, 99

Conread position: 204-389
Cow position: chrX:1572045-1572227 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 98, 0

Conread position: 204-500
Cow position: chrX:20710168-20709868 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 70

Conread position: 205-430
Cow position: chrX:26493540-26493766 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 91, 188

Conread position: 207-491
Cow position: chrX:12405290-12405571 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 237

Conread position: 207-492
Cow position: chrX:6488667-6488391 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 30

Conread position: 208-500
Cow position: chrX:37843807-37843517 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 12

Conread position: 209-492
Cow position: chrX:43973634-43973363 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 92, 75

Conread position: 215-490
Cow position: chrX:42507565-42507840 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 139, 79

Conread position: 216-499
Cow position: chrX:29875995-29876269 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 204, 47

Conread position: 217-427
Cow position: chrX:19003374-19003174 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 21, 0

Conread position: 217-500
Cow position: chrX:13265546-13265823 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 217
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 32, 36

Conread position: 221-500
Cow position: chrX:24105701-24105423 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 94

Conread position: 221-500
Cow position: chrX:42584997-42585272 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 204
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 24, 121

Conread position: 222-374
Cow position: chrX:13136156-13136307 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 222-491
Cow position: chrX:11589512-11589783 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 81

Conread position: 224-368
Cow position: chrX:21004806-21004953 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 224-500
Cow position: chrX:14900659-14900925 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 36

Conread position: 225-489
Cow position: chrX:37541191-37540932 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 192
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 164, 55

Conread position: 225-492
Cow position: chrX:6234376-6234644 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 168

Conread position: 227-500
Cow position: chrX:10437596-10437868 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 177
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 156, 110

Conread position: 231-500
Cow position: chrX:26875814-26876085 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 154

Conread position: 232-424
Cow position: chrX:20790979-20790798 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 23, 0

Conread position: 233-492
Cow position: chrX:40116485-40116226 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 25, 20

Conread position: 233-500
Cow position: chrX:19188996-19188733 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 60

Conread position: 233-500
Cow position: chrX:41199173-41198901 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 110

Conread position: 234-368
Cow position: chrX:17301242-17301378 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 234-418
Cow position: chrX:9155325-9155137 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 234-476
Cow position: chrX:13785296-13785537 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 183
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 65, 158

Conread position: 234-500
Cow position: chrX:20752320-20752056 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 72

Conread position: 235-437
Cow position: chrX:35848627-35848423 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 21, 10

Conread position: 238-464
Cow position: chrX:41991983-41992209 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 185
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 26, 68

Conread position: 239-492
Cow position: chrX:28105977-28105725 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 183, 64

Conread position: 240-500
Cow position: chrX:41166904-41167168 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 152

Conread position: 241-489
Cow position: chrX:48243409-48243644 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 241-491
Cow position: chrX:36961698-36961441 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 56

Conread position: 241-492
Cow position: chrX:34270458-34270211 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 241-500
Cow position: chrX:25232650-25232387 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 60, 151

Conread position: 242-500
Cow position: chrX:35409714-35409462 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 89, 15

Conread position: 243-489
Cow position: chrX:8070644-8070894 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 186, 58

Conread position: 243-492
Cow position: chrX:28845888-28845650 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 149

Conread position: 243-497
Cow position: chrX:9855353-9855100 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 82

Conread position: 243-499
Cow position: chrX:157717-157978 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 176
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 66, 149

Conread position: 243-500
Cow position: chrX:12018347-12018072 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 162, 78

Conread position: 243-501
Cow position: chrX:35042273-35042015 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 188
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 162, 51

Conread position: 244-406
Cow position: chrX:29487954-29488107 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 244-447
Cow position: chrX:32215256-32215051 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 15, 99

Conread position: 245-499
Cow position: chrX:9954192-9953939 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 62

Conread position: 246-492
Cow position: chrX:42875035-42874782 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 57

Conread position: 246-500
Cow position: chrX:41743969-41743709 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 149

Conread position: 246-500
Cow position: chrX:42461692-42461949 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 60

Conread position: 247-500
Cow position: chrX:35681393-35681143 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 187

Conread position: 247-500
Cow position: chrX:40648041-40647774 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 61

Conread position: 250-415
Cow position: chrX:47209394-47209231 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 108, 53

Conread position: 250-491
Cow position: chrX:47191359-47191593 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 44, 105

Conread position: 250-492
Cow position: chrX:40452170-40452408 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 183, 43

Conread position: 250-500
Cow position: chrX:10123305-10123548 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 175, 64

Conread position: 250-500
Cow position: chrX:15139499-15139747 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 52

Conread position: 250-500
Cow position: chrX:16789808-16790041 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 250-500
Cow position: chrX:19015485-19015239 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 87

Conread position: 253-387
Cow position: chrX:42789665-42789533 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 253-500
Cow position: chrX:11581979-11581731 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 197
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 7, 67

Conread position: 253-501
Cow position: chrX:17498130-17497892 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 75

Conread position: 254-500
Cow position: chrX:36249817-36250065 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 46, 65

Conread position: 255-492
Cow position: chrX:29509395-29509639 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 37

Conread position: 256-501
Cow position: chrX:47756886-47757133 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 189
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 138, 51

Conread position: 257-499
Cow position: chrX:28157542-28157283 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 120

Conread position: 258-489
Cow position: chrX:45875038-45874806 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 172, 58

Conread position: 258-494
Cow position: chrX:30832812-30833043 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 42

Conread position: 258-500
Cow position: chrX:26286021-26285776 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 83

Conread position: 258-501
Cow position: chrX:17908248-17908488 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 44

Conread position: 263-446
Cow position: chrX:44754625-44754800 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 263-465
Cow position: chrX:14003611-14003813 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 170, 41

Conread position: 263-465
Cow position: chrX:36723054-36723260 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 169, 121

Conread position: 263-469
Cow position: chrX:37750219-37750426 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 150

Conread position: 263-489
Cow position: chrX:12116082-12115847 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 128, 0

Conread position: 263-492
Cow position: chrX:32127957-32128176 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 39

Conread position: 263-498
Cow position: chrX:4091675-4091445 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 120, 33

Conread position: 263-499
Cow position: chrX:28835867-28836103 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 42, 105

Conread position: 263-500
Cow position: chrX:9997299-9997537 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 44

Conread position: 263-500
Cow position: chrX:14925035-14924797 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 12

Conread position: 263-500
Cow position: chrX:23970414-23970185 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 31

Conread position: 263-500
Cow position: chrX:47379432-47379670 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 189
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 41, 34

Conread position: 266-406
Cow position: chrX:48823256-48823113 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 66

Conread position: 266-436
Cow position: chrX:31986831-31987002 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 118, 15

Conread position: 266-500
Cow position: chrX:10306707-10306467 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 47, 38

Conread position: 266-500
Cow position: chrX:25238211-25237973 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 63

Conread position: 267-501
Cow position: chrX:44053291-44053054 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 31, 124

Conread position: 268-452
Cow position: chrX:35969056-35969238 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 151
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 75, 41

Conread position: 268-486
Cow position: chrX:10096062-10095837 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 110

Conread position: 268-491
Cow position: chrX:38439511-38439280 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 124

Conread position: 268-497
Cow position: chrX:37048551-37048780 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 184
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 160, 23

Conread position: 268-500
Cow position: chrX:45015606-45015383 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 175
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 35, 0

Conread position: 270-392
Cow position: chrX:25282987-25283107 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 270-441
Cow position: chrX:29056146-29055979 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 39, 97

Conread position: 270-484
Cow position: chrX:2383513-2383301 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 150, 33

Conread position: 272-389
Cow position: chrX:22376680-22376563 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 86

Conread position: 273-500
Cow position: chrX:23497642-23497868 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 117

Conread position: 273-500
Cow position: chrX:47232857-47232634 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 24, 49

Conread position: 282-412
Cow position: chrX:10079431-10079560 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 19

Conread position: 282-489
Cow position: chrX:8991901-8991695 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 140, 19

Conread position: 285-500
Cow position: chrX:35284638-35284420 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 110

Conread position: 285-500
Cow position: chrX:42338936-42339139 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 169
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 137, 17

Conread position: 288-483
Cow position: chrX:31256877-31256681 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 16, 29

Conread position: 291-486
Cow position: chrX:1505718-1505523 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 155
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 13, 49

Conread position: 292-500
Cow position: chrX:42282435-42282229 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 133, 92

Conread position: 293-489
Cow position: chrX:10373322-10373118 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 65

Conread position: 295-500
Cow position: chrX:35609993-35609783 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 96

Conread position: 295-500
Cow position: chrX:43647743-43647945 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 137, 71

Conread position: 296-499
Cow position: chrX:1728425-1728622 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 140, 58

Conread position: 298-492
Cow position: chrX:35387900-35388101 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 11, 93

Conread position: 299-500
Cow position: chrX:41403979-41403769 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 90, 0

Conread position: 299-500
Cow position: chrX:41410527-41410317 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 90, 0

Conread position: 304-500
Cow position: chrX:19019110-19019314 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 163
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 15, 0

Conread position: 304-500
Cow position: chrX:21665599-21665797 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 162
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 129, 23

Conread position: 305-499
Cow position: chrX:46315383-46315583 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 128, 85

Conread position: 314-500
Cow position: chrX:48684239-48684426 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 151
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 15, 0

Conread position: 318-499
Cow position: chrX:25411822-25411634 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 69, 65

Conread position: 321-492
Cow position: chrX:38967626-38967455 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 101, 70

Conread position: 322-484
Cow position: chrX:41764623-41764451 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 82, 69

Conread position: 325-486
Cow position: chrX:24149615-24149450 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 108, 65

Conread position: 326-500
Cow position: chrX:2206579-2206747 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 11, 0

Conread position: 328-500
Cow position: chrX:23061419-23061250 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 11, 57

Conread position: 335-492
Cow position: chrX:4123802-4123640 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 130
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 52, 0

Conread position: 338-466
Cow position: chrX:41271246-41271377 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 98, 53

Conread position: 341-500
Cow position: chrX:16324006-16324167 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 80, 0

Conread position: 341-500
Cow position: chrX:39555871-39556020 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 50

Conread position: 345-500
Cow position: chrX:7382288-7382120 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 136
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 354-500
Cow position: chrX:25036750-25036903 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 31, 0

Show alignments to all cow chromosomes.