Cow genome map
| Conread name: | blip-UMC-pblivp1-012-d08 |
| Conread position: | 5-319 |
| Cow position: | chr3:15987868-15988167 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 169 |
| Conread position: | 9-317 |
| Cow position: | chr3:20781541-20781223 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 139 |
| Conread position: | 37-319 |
| Cow position: | chr3:12673436-12673149 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 68, 172 |
| Conread position: | 149-317 |
| Cow position: | chr3:48361987-48362163 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 156-319 |
| Cow position: | chr3:31748751-31748906 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 11, 6 |
| Conread position: | 160-319 |
| Cow position: | chr3:52664471-52664623 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 17, 36 |
| Conread position: | 160-319 |
| Cow position: | chr3:56102815-56102967 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 161-319 |
| Cow position: | chr3:8605830-8605682 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 6, 27 |
| Conread position: | 162-319 |
| Cow position: | chr3:52257439-52257287 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 5, 34 |
| Conread position: | 166-312 |
| Cow position: | chr3:32703095-32702956 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 67, 29 |
| Conread position: | 166-318 |
| Cow position: | chr3:37627972-37628116 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 67, 29 |
| Conread position: | 172-317 |
| Cow position: | chr3:31050924-31050779 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 6, 39 |
| Conread position: | 174-316 |
| Cow position: | chr3:6896915-6897052 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 174-316 |
| Cow position: | chr3:37983277-37983141 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 21 |
| Conread position: | 174-317 |
| Cow position: | chr3:15663355-15663218 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 59, 21 |
| Conread position: | 174-317 |
| Cow position: | chr3:21303475-21303339 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 59, 21 |
| Conread position: | 174-317 |
| Cow position: | chr3:30938585-30938722 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 61, 21 |
| Conread position: | 175-319 |
| Cow position: | chr3:10412336-10412474 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 62, 20 |
| Conread position: | 192-317 |
| Cow position: | chr3:26566877-26567001 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 192-317 |
| Cow position: | chr3:64683907-64683787 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 192-319 |
| Cow position: | chr3:84198885-84199010 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 41, 13 |
| Conread position: | 208-319 |
| Cow position: | chr3:3885083-3884971 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 208-319 |
| Cow position: | chr3:26919838-26919949 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 25, 88 |
| Conread position: | 209-317 |
| Cow position: | chr3:16657752-16657643 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 209-319 |
| Cow position: | chr3:70322556-70322447 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 73 |
| Conread position: | 210-318 |
| Cow position: | chr3:7677611-7677718 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 23, 39 |
| Conread position: | 217-319 |
| Cow position: | chr3:10371501-10371602 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 16, 41 |
| Conread position: | 221-317 |
| Cow position: | chr3:34393158-34393061 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
Show alignments to all cow chromosomes.