Cow genome map
| Conread name: | blip-UMC-pblivp1-012-d08 |
| Conread position: | 9-318 |
| Cow position: | chr4:22904397-22904713 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 237 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 136-318 |
| Cow position: | chr4:16606331-16606143 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 159-319 |
| Cow position: | chr4:65816778-65816626 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 73, 35 |
| Conread position: | 160-317 |
| Cow position: | chr4:17775889-17775738 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 7, 36 |
| Conread position: | 160-317 |
| Cow position: | chr4:27293011-27292857 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 36 |
| Conread position: | 160-319 |
| Cow position: | chr4:3474555-3474709 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 7, 37 |
| Conread position: | 169-317 |
| Cow position: | chr4:4185067-4185209 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 64, 26 |
| Conread position: | 174-316 |
| Cow position: | chr4:12454858-12454994 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 174-317 |
| Cow position: | chr4:1028337-1028202 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 59, 21 |
| Conread position: | 174-317 |
| Cow position: | chr4:11192849-11192986 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 59, 13 |
| Conread position: | 174-317 |
| Cow position: | chr4:27539560-27539694 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 174-317 |
| Cow position: | chr4:30508093-30508229 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 61, 21 |
| Conread position: | 174-319 |
| Cow position: | chr4:13254559-13254697 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 57, 21 |
| Conread position: | 174-319 |
| Cow position: | chr4:25983183-25983322 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 59, 21 |
| Conread position: | 174-319 |
| Cow position: | chr4:26468126-26468264 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 59, 21 |
| Conread position: | 174-319 |
| Cow position: | chr4:41037722-41037861 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 174-319 |
| Cow position: | chr4:54189664-54189802 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 59, 21 |
| Conread position: | 174-319 |
| Cow position: | chr4:65918583-65918717 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 59, 21 |
| Conread position: | 175-317 |
| Cow position: | chr4:3252649-3252513 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 58, 20 |
| Conread position: | 175-317 |
| Cow position: | chr4:3849494-3849630 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 20 |
| Conread position: | 175-319 |
| Cow position: | chr4:64790859-64790997 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 58, 20 |
| Conread position: | 176-318 |
| Cow position: | chr4:34700655-34700520 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 57, 19 |
| Conread position: | 178-317 |
| Cow position: | chr4:3284460-3284327 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 57, 17 |
| Conread position: | 192-319 |
| Cow position: | chr4:20027613-20027488 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 40, 22 |
| Conread position: | 192-319 |
| Cow position: | chr4:66174415-66174288 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 207-318 |
| Cow position: | chr4:1239502-1239390 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 208-317 |
| Cow position: | chr4:6000512-6000403 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 92 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 27, 41 |
| Conread position: | 208-317 |
| Cow position: | chr4:19140923-19141033 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 209-317 |
| Cow position: | chr4:44901178-44901286 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 39 |
| Conread position: | 210-319 |
| Cow position: | chr4:11100672-11100563 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 25, 94 |
| Conread position: | 210-319 |
| Cow position: | chr4:43841053-43840946 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
Show alignments to all cow chromosomes.