Cow genome map
| Conread name: | blip-UMC-pblivp1-012-d08 |
| Conread position: | 9-271 |
| Cow position: | chr5:56932026-56931761 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 9-277 |
| Cow position: | chr5:445308-445570 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 18 |
| Conread position: | 15-319 |
| Cow position: | chr5:47697400-47697073 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 237 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 49-317 |
| Cow position: | chr5:42743644-42743923 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 44, 23 |
| Conread position: | 160-317 |
| Cow position: | chr5:26466619-26466769 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 72, 33 |
| Conread position: | 160-319 |
| Cow position: | chr5:15723349-15723183 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 166-317 |
| Cow position: | chr5:43991268-43991413 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 66, 29 |
| Conread position: | 172-317 |
| Cow position: | chr5:34670096-34669958 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 61, 23 |
| Conread position: | 174-317 |
| Cow position: | chr5:18491400-18491537 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 59, 21 |
| Conread position: | 174-317 |
| Cow position: | chr5:30294303-30294439 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 99, 19 |
| Conread position: | 174-317 |
| Cow position: | chr5:57936128-57935991 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 60, 21 |
| Conread position: | 174-318 |
| Cow position: | chr5:14631271-14631132 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 59, 21 |
| Conread position: | 175-317 |
| Cow position: | chr5:19970037-19969901 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 58, 20 |
| Conread position: | 187-318 |
| Cow position: | chr5:47600607-47600739 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 192-315 |
| Cow position: | chr5:4165639-4165761 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 192-316 |
| Cow position: | chr5:33536625-33536746 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 192-318 |
| Cow position: | chr5:72046655-72046531 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 41, 12 |
| Conread position: | 193-316 |
| Cow position: | chr5:41548538-41548415 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 5, 61 |
| Conread position: | 203-317 |
| Cow position: | chr5:53834667-53834783 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 203-319 |
| Cow position: | chr5:30301869-30301985 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 29, 52 |
| Conread position: | 208-317 |
| Cow position: | chr5:32697781-32697671 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 91 |
| Conread position: | 208-317 |
| Cow position: | chr5:62377387-62377497 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 208-319 |
| Cow position: | chr5:21827841-21827953 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 208-319 |
| Cow position: | chr5:71457025-71456913 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 218-317 |
| Cow position: | chr5:25231891-25231791 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 86 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
Show alignments to all cow chromosomes.