Cow genome map
| Conread name: | blip-UMC-pblivp1-012-d08 |
| Conread position: | 5-317 |
| Cow position: | chr9:46669811-46670130 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 9-316 |
| Cow position: | chr9:12161466-12161794 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 293 |
| Conread position: | 9-319 |
| Cow position: | chr9:28774384-28774066 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 211 |
| Conread position: | 14-319 |
| Cow position: | chr9:1850751-1850443 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 45 |
| Conread position: | 160-317 |
| Cow position: | chr9:23421633-23421785 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 7, 36 |
| Conread position: | 160-317 |
| Cow position: | chr9:44920284-44920434 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 7, 36 |
| Conread position: | 160-319 |
| Cow position: | chr9:3222521-3222672 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 7, 36 |
| Conread position: | 160-319 |
| Cow position: | chr9:17007912-17007758 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 174-314 |
| Cow position: | chr9:34688547-34688679 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 59, 17 |
| Conread position: | 174-315 |
| Cow position: | chr9:3411832-3411698 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 21 |
| Conread position: | 174-315 |
| Cow position: | chr9:26087942-26087806 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 59, 17 |
| Conread position: | 174-317 |
| Cow position: | chr9:9357232-9357368 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 59, 21 |
| Conread position: | 174-318 |
| Cow position: | chr9:17870556-17870696 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 61, 21 |
| Conread position: | 174-319 |
| Cow position: | chr9:10672272-10672134 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 99, 19 |
| Conread position: | 174-319 |
| Cow position: | chr9:29337967-29338108 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 21 |
| Conread position: | 174-319 |
| Cow position: | chr9:43856476-43856337 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 61, 13 |
| Conread position: | 174-319 |
| Cow position: | chr9:58615633-58615495 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 59, 21 |
| Conread position: | 174-319 |
| Cow position: | chr9:59508117-59507978 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 59, 21 |
| Conread position: | 189-319 |
| Cow position: | chr9:23028959-23028829 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 190-319 |
| Cow position: | chr9:55797031-55796904 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 43, 15 |
| Conread position: | 192-319 |
| Cow position: | chr9:9415032-9415157 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 193-319 |
| Cow position: | chr9:51692543-51692419 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 201-319 |
| Cow position: | chr9:21841482-21841363 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 208-319 |
| Cow position: | chr9:18071571-18071683 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 209-319 |
| Cow position: | chr9:5840058-5839947 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 217-319 |
| Cow position: | chr9:9623036-9623139 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 220-319 |
| Cow position: | chr9:9515772-9515871 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 15, 87 |
Show alignments to all cow chromosomes.