Cow genome map


           Conread name:
           gvo-UMC-pgvo4-013-g02
        

               Conread position:
               1-295
               

               Cow position:
               chr15:53298164-53297875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               254, 39
               

               Conread position:
               5-226
               

               Cow position:
               chr15:16591433-16591654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               120, 41
               

               Conread position:
               57-292
               

               Cow position:
               chr15:29288657-29288885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               18, 36
               

               Conread position:
               68-295
               

               Cow position:
               chr15:36628538-36628765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               67, 132
               

               Conread position:
               78-279
               

               Cow position:
               chr15:683854-683653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               167, 55
               

               Conread position:
               94-241
               

               Cow position:
               chr15:4631708-4631856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               98-293
               

               Cow position:
               chr15:7895523-7895723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               119-293
               

               Cow position:
               chr15:3650976-3650799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               123-295
               

               Cow position:
               chr15:16926883-16926716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               113, 25
               

               Conread position:
               164-293
               

               Cow position:
               chr15:24792645-24792514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               76, 23
               
Show alignments to all cow chromosomes.