Cow genome map


           Conread name:
           gvo-UMC-pgvo4-013-g02
        

               Conread position:
               20-295
               

               Cow position:
               chr17:3694884-3695160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               93, 20
               

               Conread position:
               55-295
               

               Cow position:
               chr17:38616739-38616497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               6, 30
               

               Conread position:
               63-295
               

               Cow position:
               chr17:156001-156230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               8, 29
               

               Conread position:
               74-287
               

               Cow position:
               chr17:20399873-20399661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               181, 139
               

               Conread position:
               79-295
               

               Cow position:
               chr17:1774522-1774307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               48, 159
               

               Conread position:
               94-295
               

               Cow position:
               chr17:15369938-15369737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               32, 18
               

               Conread position:
               112-295
               

               Cow position:
               chr17:22431950-22432139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               7, 65
               

               Conread position:
               119-291
               

               Cow position:
               chr17:23842863-23842689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               7, 15
               
Show alignments to all cow chromosomes.