Cow genome map
| Conread name: | gvo-UMC-pgvo4-014-d12 |
| Conread position: | 88-271 |
| Cow position: | chr16:44522798-44522975 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 17, 5 |
| Conread position: | 88-325 |
| Cow position: | chr16:49726137-49726377 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 11, 22 |
| Conread position: | 89-327 |
| Cow position: | chr16:20984745-20984987 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 16, 20 |
| Conread position: | 93-327 |
| Cow position: | chr16:33147545-33147771 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 94-327 |
| Cow position: | chr16:3891851-3892070 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 183, 85 |
| Conread position: | 95-269 |
| Cow position: | chr16:30563192-30563362 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 95-269 |
| Cow position: | chr16:31703429-31703599 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 95-327 |
| Cow position: | chr16:50545873-50545645 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 10, 14 |
| Conread position: | 97-280 |
| Cow position: | chr16:22245364-22245544 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 66, 42 |
| Conread position: | 97-286 |
| Cow position: | chr16:10444127-10444319 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 8, 12 |
| Conread position: | 97-325 |
| Cow position: | chr16:22240122-22240340 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 64, 42 |
| Conread position: | 98-253 |
| Cow position: | chr16:28755276-28755431 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 63, 40 |
| Conread position: | 98-288 |
| Cow position: | chr16:54409174-54409359 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 7, 11 |
| Conread position: | 98-292 |
| Cow position: | chr16:10250534-10250725 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 98-324 |
| Cow position: | chr16:8786951-8786726 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 181, 0 |
| Conread position: | 98-327 |
| Cow position: | chr16:7770157-7770379 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 70, 27 |
| Conread position: | 100-251 |
| Cow position: | chr16:13126946-13126794 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 101-220 |
| Cow position: | chr16:19937243-19937360 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 38 |
| Conread position: | 108-281 |
| Cow position: | chr16:43162870-43162700 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 55, 28 |
| Conread position: | 108-325 |
| Cow position: | chr16:200232-200444 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 108-327 |
| Cow position: | chr16:23495929-23495703 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 37, 152 |
| Conread position: | 108-327 |
| Cow position: | chr16:26065429-26065649 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 172, 181 |
| Conread position: | 108-327 |
| Cow position: | chr16:56223816-56224030 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 189, 29 |
| Conread position: | 108-329 |
| Cow position: | chr16:1632444-1632661 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 40, 28 |
| Conread position: | 108-330 |
| Cow position: | chr16:19262410-19262192 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 113-327 |
| Cow position: | chr16:37842090-37842292 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 50, 24 |
| Conread position: | 113-330 |
| Cow position: | chr16:34131637-34131427 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 114-274 |
| Cow position: | chr16:36429854-36430007 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 114-304 |
| Cow position: | chr16:43196258-43196442 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 115-287 |
| Cow position: | chr16:46545516-46545348 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 125, 50 |
| Conread position: | 115-338 |
| Cow position: | chr16:35412199-35411982 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 146-326 |
| Cow position: | chr16:27974813-27974632 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 135, 72 |
| Conread position: | 150-325 |
| Cow position: | chr16:32029273-32029443 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 109 |
| Conread position: | 153-327 |
| Cow position: | chr16:23384364-23384545 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 22, 156 |
| Conread position: | 175-330 |
| Cow position: | chr16:33709597-33709749 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 197-327 |
| Cow position: | chr16:3854454-3854325 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 94, 0 |
Show alignments to all cow chromosomes.