Cow genome map


           Conread name:
           gvo-UMC-pgvo4-014-d12
        

               Conread position:
               81-292
               

               Cow position:
               chr19:23666216-23666011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               24, 18
               

               Conread position:
               93-327
               

               Cow position:
               chr19:10551835-10552062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               12, 17
               

               Conread position:
               98-277
               

               Cow position:
               chr19:52753505-52753331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               27, 43
               

               Conread position:
               98-281
               

               Cow position:
               chr19:49164838-49165014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               52, 28
               

               Conread position:
               98-327
               

               Cow position:
               chr19:1065339-1065114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               11, 7
               

               Conread position:
               99-327
               

               Cow position:
               chr19:7879240-7879456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               64, 26
               

               Conread position:
               108-283
               

               Cow position:
               chr19:17221337-17221514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               17, 30
               

               Conread position:
               111-325
               

               Cow position:
               chr19:2819660-2819457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               52, 28
               

               Conread position:
               114-329
               

               Cow position:
               chr19:45593720-45593931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               10, 25
               

               Conread position:
               118-326
               

               Cow position:
               chr19:27830424-27830215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               95, 18
               

               Conread position:
               130-325
               

               Cow position:
               chr19:13222358-13222169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               6, 0
               
Show alignments to all cow chromosomes.