Cow genome map
| Conread name: | gvo-UMC-pgvo4-014-d12 |
| Conread position: | 81-288 |
| Cow position: | chr2:65400195-65399985 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 19, 10 |
| Conread position: | 81-327 |
| Cow position: | chr2:46008336-46008580 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 85-325 |
| Cow position: | chr2:39579264-39579034 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 78, 14 |
| Conread position: | 95-281 |
| Cow position: | chr2:7348044-7348230 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 10, 14 |
| Conread position: | 95-327 |
| Cow position: | chr2:46408605-46408834 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 68, 30 |
| Conread position: | 95-327 |
| Cow position: | chr2:70829940-70829713 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 157, 179 |
| Conread position: | 96-326 |
| Cow position: | chr2:46966960-46966730 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 9, 13 |
| Conread position: | 97-327 |
| Cow position: | chr2:30639842-30639607 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 54, 193 |
| Conread position: | 97-327 |
| Cow position: | chr2:46025655-46025429 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 12 |
| Conread position: | 98-281 |
| Cow position: | chr2:41697684-41697502 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 70, 41 |
| Conread position: | 98-292 |
| Cow position: | chr2:57381487-57381677 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 27, 41 |
| Conread position: | 98-316 |
| Cow position: | chr2:71475187-71474985 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 98-317 |
| Cow position: | chr2:44556455-44556673 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 110, 56 |
| Conread position: | 98-319 |
| Cow position: | chr2:54448851-54448633 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 65, 38 |
| Conread position: | 98-326 |
| Cow position: | chr2:34328657-34328881 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 212, 56 |
| Conread position: | 98-326 |
| Cow position: | chr2:38876830-38876610 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 30, 84 |
| Conread position: | 98-329 |
| Cow position: | chr2:37076277-37076506 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 98-351 |
| Cow position: | chr2:74692860-74693108 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 189 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 11, 7 |
| Conread position: | 107-330 |
| Cow position: | chr2:16799146-16798927 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 108-352 |
| Cow position: | chr2:40015716-40015461 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 17, 31 |
| Conread position: | 113-327 |
| Cow position: | chr2:12146462-12146255 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 113-329 |
| Cow position: | chr2:38872126-38871911 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 14, 29 |
| Conread position: | 113-329 |
| Cow position: | chr2:45773489-45773284 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 114-326 |
| Cow position: | chr2:43551436-43551226 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 115-329 |
| Cow position: | chr2:9937565-9937359 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 12, 24 |
| Conread position: | 115-338 |
| Cow position: | chr2:46773193-46773408 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 116-279 |
| Cow position: | chr2:1332550-1332390 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 121-332 |
| Cow position: | chr2:50138235-50138441 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 123-327 |
| Cow position: | chr2:38837989-38838189 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 124-329 |
| Cow position: | chr2:43015383-43015577 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 125-327 |
| Cow position: | chr2:38897601-38897409 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 35, 23 |
| Conread position: | 136-329 |
| Cow position: | chr2:17862260-17862076 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 124, 19 |
| Conread position: | 150-286 |
| Cow position: | chr2:10969998-10970135 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 155-294 |
| Cow position: | chr2:86513644-86513782 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 178-327 |
| Cow position: | chr2:63041873-63042030 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 185-326 |
| Cow position: | chr2:66982210-66982069 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-327 |
| Cow position: | chr2:46939292-46939153 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 222-338 |
| Cow position: | chr2:45284306-45284190 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 90 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.