Cow genome map


           Conread name:
           gvo-UMC-pgvo4-014-d12
        

               Conread position:
               103-277
               

               Cow position:
               chr22:5653363-5653536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               108-294
               

               Cow position:
               chr22:22541608-22541793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               19, 30
               

               Conread position:
               108-329
               

               Cow position:
               chr22:31917658-31917441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               17, 48
               

               Conread position:
               111-327
               

               Cow position:
               chr22:3070429-3070217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               48, 66
               

               Conread position:
               113-325
               

               Cow position:
               chr22:29053249-29053459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               43, 24
               

               Conread position:
               113-327
               

               Cow position:
               chr22:5455082-5455294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               45, 69
               

               Conread position:
               113-329
               

               Cow position:
               chr22:1494769-1494989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               14, 26
               

               Conread position:
               130-329
               

               Cow position:
               chr22:3476212-3476404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               166, 7
               

               Conread position:
               146-313
               

               Cow position:
               chr22:29049941-29050095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               197-327
               

               Cow position:
               chr22:18484838-18484708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               105, 125
               
Show alignments to all cow chromosomes.