Cow genome map
| Conread name: | gvo-UMC-pgvo4-014-d12 |
| Conread position: | 83-352 |
| Cow position: | chr3:61463065-61462799 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 42, 63 |
| Conread position: | 88-327 |
| Cow position: | chr3:37256255-37256023 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 17, 9 |
| Conread position: | 97-246 |
| Cow position: | chr3:33568195-33568050 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 97-247 |
| Cow position: | chr3:67815426-67815576 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 66, 44 |
| Conread position: | 97-284 |
| Cow position: | chr3:6712479-6712294 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 66, 14 |
| Conread position: | 97-291 |
| Cow position: | chr3:2682935-2682750 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 27, 85 |
| Conread position: | 97-327 |
| Cow position: | chr3:19236254-19236483 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 82, 94 |
| Conread position: | 97-327 |
| Cow position: | chr3:52026820-52026597 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 179 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 150, 11 |
| Conread position: | 97-329 |
| Cow position: | chr3:22699504-22699728 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 98-245 |
| Cow position: | chr3:21657386-21657534 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 7, 11 |
| Conread position: | 98-281 |
| Cow position: | chr3:3549386-3549202 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 18, 7 |
| Conread position: | 98-281 |
| Cow position: | chr3:19229908-19230088 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 72, 41 |
| Conread position: | 98-293 |
| Cow position: | chr3:5052143-5052335 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 157 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 98-294 |
| Cow position: | chr3:74797573-74797379 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 98-327 |
| Cow position: | chr3:3643697-3643470 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 65, 39 |
| Conread position: | 98-327 |
| Cow position: | chr3:14185238-14185465 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 65, 39 |
| Conread position: | 98-327 |
| Cow position: | chr3:23938650-23938419 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 26, 41 |
| Conread position: | 98-329 |
| Cow position: | chr3:7837711-7837492 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 7, 11 |
| Conread position: | 98-329 |
| Cow position: | chr3:27387954-27387709 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 76 |
| Conread position: | 98-329 |
| Cow position: | chr3:63270649-63270872 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 11, 7 |
| Conread position: | 108-224 |
| Cow position: | chr3:58594215-58594330 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 108-280 |
| Cow position: | chr3:45839456-45839625 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 113-273 |
| Cow position: | chr3:7829996-7829836 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 12, 25 |
| Conread position: | 113-299 |
| Cow position: | chr3:75077236-75077061 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 114-327 |
| Cow position: | chr3:4127079-4126874 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 115-327 |
| Cow position: | chr3:69220401-69220197 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 115-338 |
| Cow position: | chr3:7865131-7865348 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 116-329 |
| Cow position: | chr3:22702865-22703067 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 119-281 |
| Cow position: | chr3:9255229-9255388 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 49, 13 |
| Conread position: | 124-327 |
| Cow position: | chr3:26586409-26586216 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 124-329 |
| Cow position: | chr3:36416155-36415951 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 194-317 |
| Cow position: | chr3:36543914-36543791 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 202-331 |
| Cow position: | chr3:58594544-58594674 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 114, 0 |
Show alignments to all cow chromosomes.