Cow genome map
| Conread name: | gvo-UMC-pgvo4-014-d12 |
| Conread position: | 87-295 |
| Cow position: | chr6:44686273-44686471 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 89-319 |
| Cow position: | chr6:19012156-19012380 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 16, 20 |
| Conread position: | 93-340 |
| Cow position: | chr6:16550975-16550732 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 32, 64 |
| Conread position: | 94-296 |
| Cow position: | chr6:2870072-2869873 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 11, 16 |
| Conread position: | 94-328 |
| Cow position: | chr6:58035834-58035599 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 178 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 68, 42 |
| Conread position: | 95-284 |
| Cow position: | chr6:5667866-5668066 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 30, 44 |
| Conread position: | 97-329 |
| Cow position: | chr6:20676245-20676015 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 28, 84 |
| Conread position: | 98-327 |
| Cow position: | chr6:26207589-26207357 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 7, 11 |
| Conread position: | 98-327 |
| Cow position: | chr6:26224285-26224060 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 181, 82 |
| Conread position: | 100-313 |
| Cow position: | chr6:4066557-4066344 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 172, 51 |
| Conread position: | 100-325 |
| Cow position: | chr6:45338425-45338214 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 100-327 |
| Cow position: | chr6:60174878-60174650 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 179, 118 |
| Conread position: | 107-330 |
| Cow position: | chr6:23899315-23899097 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 193, 29 |
| Conread position: | 108-326 |
| Cow position: | chr6:60258714-60258496 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 55, 29 |
| Conread position: | 108-327 |
| Cow position: | chr6:22602251-22602036 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 111-340 |
| Cow position: | chr6:61642981-61642755 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 59, 25 |
| Conread position: | 113-281 |
| Cow position: | chr6:1012643-1012806 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 50, 19 |
| Conread position: | 113-327 |
| Cow position: | chr6:49167032-49166812 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 124, 105 |
| Conread position: | 116-329 |
| Cow position: | chr6:11086970-11087181 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 78, 21 |
| Conread position: | 118-329 |
| Cow position: | chr6:44819849-44820059 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 7, 21 |
| Conread position: | 127-340 |
| Cow position: | chr6:14716867-14716670 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 140-329 |
| Cow position: | chr6:42932312-42932125 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 141-302 |
| Cow position: | chr6:26937951-26938107 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 139, 47 |
Show alignments to all cow chromosomes.