Cow genome map
| Conread name: | gvo-UMC-pgvo4-014-d12 |
| Conread position: | 78-317 |
| Cow position: | chr8:49793468-49793228 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 46, 13 |
| Conread position: | 96-327 |
| Cow position: | chr8:54009833-54009615 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 9, 13 |
| Conread position: | 97-271 |
| Cow position: | chr8:25582060-25582226 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 8, 12 |
| Conread position: | 97-275 |
| Cow position: | chr8:5655202-5655021 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 53, 88 |
| Conread position: | 98-281 |
| Cow position: | chr8:54315710-54315889 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 128, 82 |
| Conread position: | 98-322 |
| Cow position: | chr8:1626507-1626283 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 11, 7 |
| Conread position: | 98-325 |
| Cow position: | chr8:4127752-4127524 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 7, 11 |
| Conread position: | 98-327 |
| Cow position: | chr8:27827358-27827583 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 98-351 |
| Cow position: | chr8:50704583-50704840 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 65, 86 |
| Conread position: | 107-232 |
| Cow position: | chr8:24628582-24628707 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 32 |
| Conread position: | 107-327 |
| Cow position: | chr8:6569319-6569105 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 116, 73 |
| Conread position: | 108-297 |
| Cow position: | chr8:5440465-5440289 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 17, 31 |
| Conread position: | 108-327 |
| Cow position: | chr8:13847150-13847368 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 108-327 |
| Cow position: | chr8:35511539-35511741 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 108-330 |
| Cow position: | chr8:26829535-26829753 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 111-281 |
| Cow position: | chr8:21056667-21056501 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 111-328 |
| Cow position: | chr8:26082463-26082676 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 113-298 |
| Cow position: | chr8:13324338-13324161 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 7, 47 |
| Conread position: | 113-306 |
| Cow position: | chr8:9294484-9294678 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 12, 26 |
| Conread position: | 113-327 |
| Cow position: | chr8:55930275-55930062 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 127, 66 |
| Conread position: | 114-275 |
| Cow position: | chr8:30563804-30563635 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 36, 23 |
| Conread position: | 115-317 |
| Cow position: | chr8:5519199-5519002 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 158 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 115-328 |
| Cow position: | chr8:48978486-48978694 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 117-324 |
| Cow position: | chr8:52022602-52022801 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 124-328 |
| Cow position: | chr8:40324484-40324691 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 158, 70 |
| Conread position: | 125-329 |
| Cow position: | chr8:7676873-7676674 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 117, 12 |
| Conread position: | 185-324 |
| Cow position: | chr8:38367514-38367653 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 194-327 |
| Cow position: | chr8:4052660-4052532 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
Show alignments to all cow chromosomes.