Cow genome map
| Conread name: | gvo-UMC-pgvo4-014-d12 |
| Conread position: | 85-327 |
| Cow position: | chrX:38674650-38674895 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 186 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 7, 36 |
| Conread position: | 95-329 |
| Cow position: | chrX:38740900-38741129 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 50, 13 |
| Conread position: | 97-325 |
| Cow position: | chrX:16893364-16893589 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 176 |
| Conread position: | 98-209 |
| Cow position: | chrX:31911216-31911105 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 98-305 |
| Cow position: | chrX:3451037-3450829 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 7, 11 |
| Conread position: | 98-327 |
| Cow position: | chrX:34768048-34767801 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 53, 132 |
| Conread position: | 98-329 |
| Cow position: | chrX:1743173-1742939 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 7, 11 |
| Conread position: | 98-329 |
| Cow position: | chrX:19737908-19738129 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 29, 64 |
| Conread position: | 98-330 |
| Cow position: | chrX:34704680-34704457 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 26, 37 |
| Conread position: | 98-336 |
| Cow position: | chrX:38129477-38129234 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 56, 101 |
| Conread position: | 99-327 |
| Cow position: | chrX:33158829-33159058 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 10 |
| Conread position: | 103-317 |
| Cow position: | chrX:29145272-29145481 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 139, 5 |
| Conread position: | 103-326 |
| Cow position: | chrX:35981469-35981685 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 108-325 |
| Cow position: | chrX:3513496-3513281 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 17, 73 |
| Conread position: | 108-338 |
| Cow position: | chrX:832083-832307 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 111-272 |
| Cow position: | chrX:25179484-25179639 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 113-284 |
| Cow position: | chrX:36874006-36874174 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 43, 68 |
| Conread position: | 113-324 |
| Cow position: | chrX:34213611-34213818 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 129, 40 |
| Conread position: | 113-351 |
| Cow position: | chrX:27529387-27529614 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 183 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 114-326 |
| Cow position: | chrX:29815598-29815808 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 19, 13 |
| Conread position: | 128-329 |
| Cow position: | chrX:25180225-25180423 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 156 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 128-329 |
| Cow position: | chrX:37251279-37251479 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 143, 52 |
| Conread position: | 141-271 |
| Cow position: | chrX:34626749-34626619 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 156-288 |
| Cow position: | chrX:29538950-29539082 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 183-332 |
| Cow position: | chrX:10062093-10062242 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-327 |
| Cow position: | chrX:6999449-6999591 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 75, 89 |
| Conread position: | 186-338 |
| Cow position: | chrX:34635675-34635521 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 191-332 |
| Cow position: | chrX:31910862-31910715 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 222-327 |
| Cow position: | chrX:23320402-23320507 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.