Cow genome map
Conread name: | mA2-MI-P-A2-acq-g-11-1-UM.s1 |
Conread position: | 2-261 |
Cow position: | chr10:24720248-24719968 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 214 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 47, 74 |
Conread position: | 2-327 |
Cow position: | chr10:38792205-38791868 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 20 |
Conread position: | 2-332 |
Cow position: | chr10:69887563-69887897 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 232 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 23, 235 |
Conread position: | 3-169 |
Cow position: | chr10:12215579-12215404 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 138 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 46, 9 |
Conread position: | 3-250 |
Cow position: | chr10:31165490-31165231 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 194 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 3-269 |
Cow position: | chr10:36818032-36817751 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 3-319 |
Cow position: | chr10:34982430-34982731 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 229 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 46, 119 |
Conread position: | 3-325 |
Cow position: | chr10:40598852-40598522 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 209 |
Conread position: | 3-328 |
Cow position: | chr10:4399740-4400077 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 266 |
Conread position: | 4-185 |
Cow position: | chr10:53797813-53798004 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 141 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 4-334 |
Cow position: | chr10:16753369-16753718 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 169 |
Conread position: | 5-164 |
Cow position: | chr10:33815977-33816145 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 124 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 43, 138 |
Conread position: | 5-286 |
Cow position: | chr10:33136023-33135729 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 210 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 44, 103 |
Conread position: | 5-326 |
Cow position: | chr10:25925173-25925507 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 100 |
Conread position: | 6-292 |
Cow position: | chr10:32307083-32306786 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 6-316 |
Cow position: | chr10:30084750-30084427 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 228 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 19, 127 |
Conread position: | 7-318 |
Cow position: | chr10:22588087-22587768 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 159 |
Conread position: | 8-272 |
Cow position: | chr10:14424085-14423807 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 200 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 9-173 |
Cow position: | chr10:32096798-32096624 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 132 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 9-327 |
Cow position: | chr10:68256322-68256000 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 243 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 40, 61 |
Conread position: | 13-164 |
Cow position: | chr10:50347360-50347520 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 122 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 36, 130 |
Conread position: | 15-327 |
Cow position: | chr10:1339149-1338823 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 274 |
Conread position: | 15-327 |
Cow position: | chr10:10076168-10076488 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 223 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 34, 151 |
Conread position: | 18-327 |
Cow position: | chr10:61535630-61535954 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 234 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 31, 85 |
Conread position: | 21-266 |
Cow position: | chr10:67295690-67295954 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 199 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 28, 87 |
Conread position: | 32-326 |
Cow position: | chr10:59341678-59341389 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 14 |
Conread position: | 33-343 |
Cow position: | chr10:55964847-55964536 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 229 |
Conread position: | 48-169 |
Cow position: | chr10:21043541-21043663 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 100 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 66, 32 |
Conread position: | 48-261 |
Cow position: | chr10:25934144-25933940 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 160 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 71, 118 |
Conread position: | 48-301 |
Cow position: | chr10:13337514-13337769 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 230 |
Conread position: | 48-334 |
Cow position: | chr10:47482056-47481773 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 187 |
Conread position: | 50-212 |
Cow position: | chr10:4676248-4676083 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 126 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 21, 50 |
Conread position: | 50-327 |
Cow position: | chr10:51684711-51684427 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 206 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 61, 175 |
Conread position: | 84-261 |
Cow position: | chr10:14389763-14389933 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 138 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 30, 83 |
Conread position: | 98-251 |
Cow position: | chr10:62888224-62888069 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 127 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 121-327 |
Cow position: | chr10:6157694-6157489 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 157 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 49, 156 |
Conread position: | 135-275 |
Cow position: | chr10:4299199-4299059 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 110 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 132, 124 |
Conread position: | 136-317 |
Cow position: | chr10:67952499-67952683 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 135 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 35, 90 |
Conread position: | 165-327 |
Cow position: | chr10:21043933-21044093 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 118 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 168-325 |
Cow position: | chr10:32096414-32096260 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 122 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 171-327 |
Cow position: | chr10:13876409-13876562 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 121 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 176-321 |
Cow position: | chr10:411874-411729 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 120 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 176-327 |
Cow position: | chr10:53798164-53798305 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 120 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 176-328 |
Cow position: | chr10:32892385-32892239 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 118 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 55, 104 |
Conread position: | 188-354 |
Cow position: | chr10:15364166-15364004 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 131 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 128, 0 |
Conread position: | 221-329 |
Cow position: | chr10:31165230-31165124 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 91 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 53, 0 |
Show alignments to all cow chromosomes.