Cow genome map

Conread name: mA2-MI-P-A2-acq-g-11-1-UM.s1

Conread position: 2-261
Cow position: chr10:24720248-24719968 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 214
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 47, 74

Conread position: 2-327
Cow position: chr10:38792205-38791868 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 20

Conread position: 2-332
Cow position: chr10:69887563-69887897 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 232
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 23, 235

Conread position: 3-169
Cow position: chr10:12215579-12215404 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 46, 9

Conread position: 3-250
Cow position: chr10:31165490-31165231 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 194
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 46, 0

Conread position: 3-269
Cow position: chr10:36818032-36817751 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 3-319
Cow position: chr10:34982430-34982731 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 229
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 46, 119

Conread position: 3-325
Cow position: chr10:40598852-40598522 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 209

Conread position: 3-328
Cow position: chr10:4399740-4400077 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 266

Conread position: 4-185
Cow position: chr10:53797813-53798004 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 4-334
Cow position: chr10:16753369-16753718 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 169

Conread position: 5-164
Cow position: chr10:33815977-33816145 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 138

Conread position: 5-286
Cow position: chr10:33136023-33135729 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 44, 103

Conread position: 5-326
Cow position: chr10:25925173-25925507 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 100

Conread position: 6-292
Cow position: chr10:32307083-32306786 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 6-316
Cow position: chr10:30084750-30084427 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 228
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 19, 127

Conread position: 7-318
Cow position: chr10:22588087-22587768 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 159

Conread position: 8-272
Cow position: chr10:14424085-14423807 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 41, 0

Conread position: 9-173
Cow position: chr10:32096798-32096624 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 9-327
Cow position: chr10:68256322-68256000 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 243
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 40, 61

Conread position: 13-164
Cow position: chr10:50347360-50347520 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 36, 130

Conread position: 15-327
Cow position: chr10:1339149-1338823 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 274

Conread position: 15-327
Cow position: chr10:10076168-10076488 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 223
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 34, 151

Conread position: 18-327
Cow position: chr10:61535630-61535954 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 234
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 31, 85

Conread position: 21-266
Cow position: chr10:67295690-67295954 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 28, 87

Conread position: 32-326
Cow position: chr10:59341678-59341389 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 14

Conread position: 33-343
Cow position: chr10:55964847-55964536 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 229

Conread position: 48-169
Cow position: chr10:21043541-21043663 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 32

Conread position: 48-261
Cow position: chr10:25934144-25933940 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 71, 118

Conread position: 48-301
Cow position: chr10:13337514-13337769 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 230

Conread position: 48-334
Cow position: chr10:47482056-47481773 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 187

Conread position: 50-212
Cow position: chr10:4676248-4676083 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 50

Conread position: 50-327
Cow position: chr10:51684711-51684427 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 61, 175

Conread position: 84-261
Cow position: chr10:14389763-14389933 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 30, 83

Conread position: 98-251
Cow position: chr10:62888224-62888069 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 127
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 15, 0

Conread position: 121-327
Cow position: chr10:6157694-6157489 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 49, 156

Conread position: 135-275
Cow position: chr10:4299199-4299059 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 132, 124

Conread position: 136-317
Cow position: chr10:67952499-67952683 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 90

Conread position: 165-327
Cow position: chr10:21043933-21044093 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 168-325
Cow position: chr10:32096414-32096260 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 171-327
Cow position: chr10:13876409-13876562 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 176-321
Cow position: chr10:411874-411729 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 120
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 176-327
Cow position: chr10:53798164-53798305 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 97, 0

Conread position: 176-328
Cow position: chr10:32892385-32892239 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 104

Conread position: 188-354
Cow position: chr10:15364166-15364004 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 128, 0

Conread position: 221-329
Cow position: chr10:31165230-31165124 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 53, 0

Show alignments to all cow chromosomes.