Cow genome map
| Conread name: | mA2-MI-P-A2-acq-g-11-1-UM.s1 |
| Conread position: | 3-160 |
| Cow position: | chr16:38592563-38592730 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 3-266 |
| Cow position: | chr16:56200955-56201231 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 46, 73 |
| Conread position: | 3-309 |
| Cow position: | chr16:12490374-12490692 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 46, 284 |
| Conread position: | 3-327 |
| Cow position: | chr16:52270300-52269968 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 199 |
| Conread position: | 5-173 |
| Cow position: | chr16:38447726-38447552 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 44, 125 |
| Conread position: | 5-202 |
| Cow position: | chr16:32072407-32072616 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 14, 31 |
| Conread position: | 5-327 |
| Cow position: | chr16:37069787-37069452 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 252 |
| Conread position: | 5-328 |
| Cow position: | chr16:38443851-38443531 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 236 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 44, 177 |
| Conread position: | 7-328 |
| Cow position: | chr16:49822899-49823229 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 272 |
| Conread position: | 12-327 |
| Cow position: | chr16:52631283-52631602 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 65 |
| Conread position: | 48-216 |
| Cow position: | chr16:23886367-23886197 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 66, 43 |
| Conread position: | 48-327 |
| Cow position: | chr16:33902029-33901751 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 67, 218 |
| Conread position: | 48-327 |
| Cow position: | chr16:54397325-54397050 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 33, 20 |
| Conread position: | 48-328 |
| Cow position: | chr16:22836421-22836145 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 81, 51 |
| Conread position: | 50-182 |
| Cow position: | chr16:9911505-9911370 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 10, 86 |
| Conread position: | 50-328 |
| Cow position: | chr16:7180401-7180669 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 208 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 114, 64 |
| Conread position: | 53-327 |
| Cow position: | chr16:37013866-37014137 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 139 |
| Conread position: | 54-273 |
| Cow position: | chr16:41376075-41375851 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 63-292 |
| Cow position: | chr16:190160-189928 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 52, 217 |
| Conread position: | 111-344 |
| Cow position: | chr16:53940670-53940442 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 60, 23 |
| Conread position: | 167-326 |
| Cow position: | chr16:18154400-18154235 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 171-324 |
| Cow position: | chr16:29619474-29619624 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 176-331 |
| Cow position: | chr16:16631285-16631440 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 209-327 |
| Cow position: | chr16:49098322-49098438 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
Show alignments to all cow chromosomes.