Cow genome map
| Conread name: | mA2-MI-P-A2-acq-g-11-1-UM.s1 |
| Conread position: | 2-323 |
| Cow position: | chr18:46094053-46093722 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 243 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 9, 163 |
| Conread position: | 3-123 |
| Cow position: | chr18:16359821-16359695 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 3-263 |
| Cow position: | chr18:54137321-54137591 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 46, 18 |
| Conread position: | 3-271 |
| Cow position: | chr18:11228032-11227754 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 206 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 46, 165 |
| Conread position: | 3-328 |
| Cow position: | chr18:53967503-53967164 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 270 |
| Conread position: | 4-327 |
| Cow position: | chr18:42287640-42287964 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 44, 158 |
| Conread position: | 4-339 |
| Cow position: | chr18:9188764-9188424 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 245 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 8, 13 |
| Conread position: | 5-167 |
| Cow position: | chr18:29641472-29641301 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 5-327 |
| Cow position: | chr18:28100541-28100213 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 7 |
| Conread position: | 5-327 |
| Cow position: | chr18:46092933-46092621 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 29 |
| Conread position: | 6-327 |
| Cow position: | chr18:8339724-8339401 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 191 |
| Conread position: | 7-173 |
| Cow position: | chr18:4980754-4980584 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 42, 103 |
| Conread position: | 7-327 |
| Cow position: | chr18:49886089-49886430 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 306 |
| Conread position: | 9-318 |
| Cow position: | chr18:44075359-44075040 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 228 |
| Conread position: | 12-173 |
| Cow position: | chr18:1095108-1095278 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 37, 131 |
| Conread position: | 12-325 |
| Cow position: | chr18:4769847-4770178 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 37, 128 |
| Conread position: | 17-327 |
| Cow position: | chr18:53533865-53533542 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 35-327 |
| Cow position: | chr18:16405194-16404889 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 238 |
| Conread position: | 48-309 |
| Cow position: | chr18:13728762-13729028 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 121 |
| Conread position: | 48-327 |
| Cow position: | chr18:15808412-15808135 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 19 |
| Conread position: | 48-327 |
| Cow position: | chr18:42818776-42819063 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 31 |
| Conread position: | 56-261 |
| Cow position: | chr18:8270540-8270335 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 58, 147 |
| Conread position: | 63-327 |
| Cow position: | chr18:44527901-44528173 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 22, 221 |
| Conread position: | 68-329 |
| Cow position: | chr18:29604772-29604503 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 30, 137 |
| Conread position: | 72-328 |
| Cow position: | chr18:9159043-9158803 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 40, 72 |
| Conread position: | 110-327 |
| Cow position: | chr18:53804544-53804331 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 56 |
| Conread position: | 110-329 |
| Cow position: | chr18:15807743-15807965 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 61, 171 |
| Conread position: | 130-272 |
| Cow position: | chr18:34538292-34538145 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 141 |
| Conread position: | 174-327 |
| Cow position: | chr18:4980291-4980139 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 138, 0 |
Show alignments to all cow chromosomes.