Cow genome map
| Conread name: | mA2-MI-P-A2-acq-g-11-1-UM.s1 |
| Conread position: | 3-170 |
| Cow position: | chr19:2789347-2789523 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 3-193 |
| Cow position: | chr19:28663839-28664039 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 46, 135 |
| Conread position: | 3-316 |
| Cow position: | chr19:961708-962017 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 111, 38 |
| Conread position: | 3-328 |
| Cow position: | chr19:51213318-51213645 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 227 |
| Conread position: | 4-327 |
| Cow position: | chr19:12447979-12448316 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 238 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 12, 280 |
| Conread position: | 4-328 |
| Cow position: | chr19:915748-915411 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 284 |
| Conread position: | 5-170 |
| Cow position: | chr19:36406555-36406383 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 126 |
| Conread position: | 5-310 |
| Cow position: | chr19:49806613-49806319 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 45, 173 |
| Conread position: | 5-327 |
| Cow position: | chr19:28422412-28422080 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 283 |
| Conread position: | 5-327 |
| Cow position: | chr19:40118547-40118878 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 236 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 44, 199 |
| Conread position: | 5-330 |
| Cow position: | chr19:5692091-5692431 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 239 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 46, 231 |
| Conread position: | 5-331 |
| Cow position: | chr19:28434429-28434763 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 273 |
| Conread position: | 7-208 |
| Cow position: | chr19:9360926-9360721 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 42, 28 |
| Conread position: | 9-288 |
| Cow position: | chr19:8734003-8734293 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 211 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 39, 67 |
| Conread position: | 13-199 |
| Cow position: | chr19:13327901-13327704 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 36, 54 |
| Conread position: | 47-336 |
| Cow position: | chr19:30145312-30145020 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 183 |
| Conread position: | 48-167 |
| Cow position: | chr19:28423725-28423845 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 48-327 |
| Cow position: | chr19:23812152-23812436 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 209 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 63, 228 |
| Conread position: | 50-164 |
| Cow position: | chr19:6157141-6157256 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 62, 85 |
| Conread position: | 61-328 |
| Cow position: | chr19:28442873-28443141 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 200 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 53, 23 |
| Conread position: | 69-327 |
| Cow position: | chr19:1021319-1021565 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 71-263 |
| Cow position: | chr19:26680351-26680154 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 134-327 |
| Cow position: | chr19:14538961-14539154 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 37, 59 |
| Conread position: | 141-327 |
| Cow position: | chr19:3750193-3750382 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 171-271 |
| Cow position: | chr19:31629305-31629406 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 182-333 |
| Cow position: | chr19:39288853-39288702 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.