Cow genome map
| Conread name: | mA2-MI-P-A2-acq-g-11-1-UM.s1 |
| Conread position: | 1-327 |
| Cow position: | chr2:39877781-39878110 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 51 |
| Conread position: | 3-168 |
| Cow position: | chr2:39758378-39758203 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 44, 137 |
| Conread position: | 3-185 |
| Cow position: | chr2:61865503-61865699 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 3-202 |
| Cow position: | chr2:9581166-9581375 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 46, 94 |
| Conread position: | 3-237 |
| Cow position: | chr2:2482714-2482479 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 51, 77 |
| Conread position: | 3-250 |
| Cow position: | chr2:55499007-55499267 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 45, 112 |
| Conread position: | 3-316 |
| Cow position: | chr2:38839142-38839466 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 155 |
| Conread position: | 3-327 |
| Cow position: | chr2:2667641-2667324 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 240 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 46, 119 |
| Conread position: | 3-327 |
| Cow position: | chr2:26282508-26282845 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 286 |
| Conread position: | 3-327 |
| Cow position: | chr2:46999977-46999639 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 280 |
| Conread position: | 3-336 |
| Cow position: | chr2:82140785-82140447 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 134 |
| Conread position: | 4-167 |
| Cow position: | chr2:34585775-34585946 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 45, 22 |
| Conread position: | 4-327 |
| Cow position: | chr2:70183328-70183019 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 39, 105 |
| Conread position: | 5-168 |
| Cow position: | chr2:47531203-47531376 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 5-248 |
| Cow position: | chr2:1481400-1481649 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 44, 14 |
| Conread position: | 5-271 |
| Cow position: | chr2:38902884-38903167 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 207 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 44, 16 |
| Conread position: | 7-251 |
| Cow position: | chr2:47127759-47127501 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 8-321 |
| Cow position: | chr2:49000381-49000709 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 297 |
| Conread position: | 9-327 |
| Cow position: | chr2:77519111-77518774 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 238 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 40, 68 |
| Conread position: | 11-292 |
| Cow position: | chr2:35900216-35900505 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 272 |
| Conread position: | 12-316 |
| Cow position: | chr2:20585262-20585565 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 37, 87 |
| Conread position: | 21-167 |
| Cow position: | chr2:57343557-57343403 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 28, 111 |
| Conread position: | 48-258 |
| Cow position: | chr2:9696331-9696116 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 63, 103 |
| Conread position: | 48-273 |
| Cow position: | chr2:44344741-44344520 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 66, 20 |
| Conread position: | 48-310 |
| Cow position: | chr2:57647595-57647856 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 40, 125 |
| Conread position: | 50-328 |
| Cow position: | chr2:38168489-38168770 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 179 |
| Conread position: | 54-327 |
| Cow position: | chr2:39871745-39872010 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 209 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 11, 55 |
| Conread position: | 80-326 |
| Cow position: | chr2:7309300-7309051 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 22, 83 |
| Conread position: | 121-327 |
| Cow position: | chr2:25651184-25651387 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 49, 150 |
| Conread position: | 134-327 |
| Cow position: | chr2:2191877-2192070 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 154-327 |
| Cow position: | chr2:43881183-43881014 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 171-327 |
| Cow position: | chr2:57343167-57343019 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 51 |
| Conread position: | 201-327 |
| Cow position: | chr2:41437184-41437061 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 7, 0 |
Show alignments to all cow chromosomes.