Cow genome map

Conread name: mA2-MI-P-A2-acq-g-11-1-UM.s1

Conread position: 1-327
Cow position: chr21:11121811-11122139 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 277

Conread position: 2-305
Cow position: chr21:36407488-36407797 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 23, 112

Conread position: 2-326
Cow position: chr21:34729549-34729882 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 86

Conread position: 2-327
Cow position: chr21:48362532-48362864 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 238
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 23, 139

Conread position: 3-160
Cow position: chr21:11253254-11253089 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 46, 23

Conread position: 3-206
Cow position: chr21:48306503-48306716 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 85

Conread position: 3-261
Cow position: chr21:8855834-8856110 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 249

Conread position: 3-327
Cow position: chr21:32431711-32432036 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 236
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 46, 163

Conread position: 3-332
Cow position: chr21:22397593-22397930 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 226

Conread position: 3-351
Cow position: chr21:13534475-13534115 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 35

Conread position: 5-182
Cow position: chr21:44726112-44725925 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 138

Conread position: 5-327
Cow position: chr21:8404492-8404180 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 226
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 44, 175

Conread position: 5-327
Cow position: chr21:48469952-48469630 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 142

Conread position: 9-327
Cow position: chr21:10736091-10735766 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 58

Conread position: 9-327
Cow position: chr21:15245217-15245537 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 225
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 40, 132

Conread position: 28-243
Cow position: chr21:44714222-44714003 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 87, 23

Conread position: 48-169
Cow position: chr21:46541666-46541543 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 48-199
Cow position: chr21:36868928-36868772 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 48-268
Cow position: chr21:29198337-29198559 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 63, 183

Conread position: 48-327
Cow position: chr21:3392067-3391797 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 213

Conread position: 48-327
Cow position: chr21:11225937-11225658 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 64, 149

Conread position: 48-327
Cow position: chr21:41537292-41537020 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 207
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 63, 78

Conread position: 48-327
Cow position: chr21:44561107-44561387 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 127

Conread position: 48-328
Cow position: chr21:13830077-13829795 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 86

Conread position: 110-328
Cow position: chr21:14141280-14141066 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 29

Conread position: 145-327
Cow position: chr21:46775616-46775796 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 26, 78

Conread position: 167-305
Cow position: chr21:11253048-11252912 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 115
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 106, 0

Conread position: 177-330
Cow position: chr21:32403406-32403557 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 128
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 96, 0

Conread position: 189-327
Cow position: chr21:36868494-36868357 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 40

Conread position: 197-327
Cow position: chr21:42059729-42059858 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 115, 0

Show alignments to all cow chromosomes.