Cow genome map


           Conread name:
           mA2-MI-P-A2-acq-g-11-1-UM.s1
        

               Conread position:
               1-329
               

               Cow position:
               chr22:41959650-41959992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               249
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               50, 74
               

               Conread position:
               2-309
               

               Cow position:
               chr22:26145533-26145851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               231
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               23, 160
               

               Conread position:
               3-319
               

               Cow position:
               chr22:31222181-31221849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               46, 253
               

               Conread position:
               4-327
               

               Cow position:
               chr22:4018973-4018644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 64
               

               Conread position:
               5-182
               

               Cow position:
               chr22:21237079-21236892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               44, 139
               

               Conread position:
               8-323
               

               Cow position:
               chr22:35537359-35537685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               48-327
               

               Cow position:
               chr22:26852789-26853065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               63, 175
               

               Conread position:
               52-327
               

               Cow position:
               chr22:47737241-47736970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               59, 159
               

               Conread position:
               106-325
               

               Cow position:
               chr22:12361579-12361358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               69, 25
               

               Conread position:
               125-327
               

               Cow position:
               chr22:18922660-18922867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               45, 183
               

               Conread position:
               187-378
               

               Cow position:
               chr22:30588268-30588085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               37, 0
               
Show alignments to all cow chromosomes.