Cow genome map
| Conread name: | mA2-MI-P-A2-acq-g-11-1-UM.s1 |
| Conread position: | 2-316 |
| Cow position: | chr29:30241771-30241448 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 289 |
| Conread position: | 3-173 |
| Cow position: | chr29:33648744-33648563 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 3-244 |
| Cow position: | chr29:4242577-4242326 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 194 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 48, 23 |
| Conread position: | 3-328 |
| Cow position: | chr29:11282898-11282558 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 240 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 60, 104 |
| Conread position: | 3-344 |
| Cow position: | chr29:30207933-30208278 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 18 |
| Conread position: | 6-284 |
| Cow position: | chr29:5224624-5224338 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 277 |
| Conread position: | 6-328 |
| Cow position: | chr29:19662708-19662383 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 99 |
| Conread position: | 9-164 |
| Cow position: | chr29:31650103-31649938 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 40, 131 |
| Conread position: | 12-182 |
| Cow position: | chr29:25914662-25914839 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 37, 162 |
| Conread position: | 15-316 |
| Cow position: | chr29:37071698-37071387 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 57 |
| Conread position: | 15-327 |
| Cow position: | chr29:10289473-10289800 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 78 |
| Conread position: | 17-331 |
| Cow position: | chr29:19651618-19651293 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 253 |
| Conread position: | 21-256 |
| Cow position: | chr29:349432-349678 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 28, 115 |
| Conread position: | 32-327 |
| Cow position: | chr29:22784744-22784441 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 244 |
| Conread position: | 47-190 |
| Cow position: | chr29:24045210-24045357 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 76, 22 |
| Conread position: | 48-170 |
| Cow position: | chr29:40057590-40057714 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 48-227 |
| Cow position: | chr29:10662306-10662125 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 40, 167 |
| Conread position: | 48-325 |
| Cow position: | chr29:13501593-13501312 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 41 |
| Conread position: | 48-334 |
| Cow position: | chr29:31843461-31843750 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 67, 231 |
| Conread position: | 50-214 |
| Cow position: | chr29:29165366-29165524 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 50-271 |
| Cow position: | chr29:13560649-13560432 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 64, 48 |
| Conread position: | 52-271 |
| Cow position: | chr29:36176053-36175832 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 62, 35 |
| Conread position: | 58-315 |
| Cow position: | chr29:919326-919568 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 57, 101 |
| Conread position: | 182-328 |
| Cow position: | chr29:24045587-24045729 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 189-330 |
| Cow position: | chr29:33648281-33648145 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 131, 53 |
Show alignments to all cow chromosomes.