Cow genome map
| Conread name: | mA2-MI-P-A2-acq-g-11-1-UM.s1 |
| Conread position: | 2-268 |
| Cow position: | chr6:48777915-48778181 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 47, 133 |
| Conread position: | 2-292 |
| Cow position: | chr6:47866437-47866741 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 218 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 27, 161 |
| Conread position: | 3-141 |
| Cow position: | chr6:39768146-39768004 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 17 |
| Conread position: | 3-271 |
| Cow position: | chr6:45553402-45553119 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 209 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 46, 92 |
| Conread position: | 3-287 |
| Cow position: | chr6:58621763-58622040 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 182 |
| Conread position: | 3-315 |
| Cow position: | chr6:541359-541055 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 22, 74 |
| Conread position: | 3-316 |
| Cow position: | chr6:11073261-11073585 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 204 |
| Conread position: | 3-326 |
| Cow position: | chr6:18405469-18405795 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 220 |
| Conread position: | 3-327 |
| Cow position: | chr6:15594402-15594076 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 228 |
| Conread position: | 3-328 |
| Cow position: | chr6:8812784-8813131 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 242 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 46, 155 |
| Conread position: | 3-331 |
| Cow position: | chr6:16440444-16440111 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 93 |
| Conread position: | 3-331 |
| Cow position: | chr6:27903898-27904225 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 238 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 45, 157 |
| Conread position: | 4-209 |
| Cow position: | chr6:32921614-32921405 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 25, 140 |
| Conread position: | 5-327 |
| Cow position: | chr6:9518776-9519112 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 284 |
| Conread position: | 13-328 |
| Cow position: | chr6:55022213-55022540 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 274 |
| Conread position: | 17-278 |
| Cow position: | chr6:52439720-52439455 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 32, 105 |
| Conread position: | 48-199 |
| Cow position: | chr6:11096654-11096809 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 69, 32 |
| Conread position: | 48-327 |
| Cow position: | chr6:1565945-1565682 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 63, 32 |
| Conread position: | 48-330 |
| Cow position: | chr6:11298942-11298659 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 58, 80 |
| Conread position: | 50-327 |
| Cow position: | chr6:59920332-59920596 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 64, 93 |
| Conread position: | 63-316 |
| Cow position: | chr6:48019445-48019194 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 51, 100 |
| Conread position: | 110-268 |
| Cow position: | chr6:247056-246903 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 110-331 |
| Cow position: | chr6:28596880-28597103 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 162 |
| Conread position: | 119-327 |
| Cow position: | chr6:41252157-41252368 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 52, 159 |
| Conread position: | 129-318 |
| Cow position: | chr6:5713676-5713869 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 32, 63 |
| Conread position: | 206-322 |
| Cow position: | chr6:47017937-47017823 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
Show alignments to all cow chromosomes.