Cow genome map

Conread name: mA2-MI-P-A2-acq-g-11-1-UM.s1

Conread position: 1-328
Cow position: chr9:6599035-6599373 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 211

Conread position: 2-191
Cow position: chr9:44403652-44403451 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 75

Conread position: 3-168
Cow position: chr9:9535821-9535993 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 70

Conread position: 3-168
Cow position: chr9:9584401-9584229 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 46, 70

Conread position: 3-325
Cow position: chr9:10726536-10726232 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 229
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 84

Conread position: 3-327
Cow position: chr9:8759944-8760289 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 297

Conread position: 5-164
Cow position: chr9:54361063-54360897 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 136

Conread position: 6-202
Cow position: chr9:49371216-49371004 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 7-333
Cow position: chr9:20709349-20709010 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 296

Conread position: 8-279
Cow position: chr9:50215374-50215100 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 197
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 62

Conread position: 8-327
Cow position: chr9:58397245-58397574 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 315

Conread position: 9-328
Cow position: chr9:34174393-34174733 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 225
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 40, 134

Conread position: 47-327
Cow position: chr9:13082568-13082839 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 68, 89

Conread position: 47-327
Cow position: chr9:49637665-49637929 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 194
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 104

Conread position: 48-251
Cow position: chr9:29097891-29097682 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 19

Conread position: 48-327
Cow position: chr9:56283793-56284080 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 50-335
Cow position: chr9:20766605-20766875 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 206
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 61, 47

Conread position: 53-333
Cow position: chr9:3497795-3497515 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 16

Conread position: 70-316
Cow position: chr9:8863197-8863449 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 45, 9

Conread position: 121-325
Cow position: chr9:9731086-9730880 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 49, 110

Conread position: 131-329
Cow position: chr9:54454081-54453876 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 163
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 44, 0

Conread position: 134-306
Cow position: chr9:3439741-3439576 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 140-263
Cow position: chr9:42379373-42379246 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 154-327
Cow position: chr9:45181378-45181199 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 0

Conread position: 171-327
Cow position: chr9:9537240-9537397 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 117, 0

Conread position: 197-327
Cow position: chr9:51889247-51889374 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 0

Show alignments to all cow chromosomes.