Cow genome map
| Conread name: | mA2-MI-P-A2-aex-a-09-1-UM.s1 |
| Conread position: | 5-272 |
| Cow position: | chr12:5800810-5801086 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 77, 16 |
| Conread position: | 6-252 |
| Cow position: | chr12:28748710-28748967 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 155 |
| Conread position: | 6-264 |
| Cow position: | chr12:31228350-31228610 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 90, 50 |
| Conread position: | 6-270 |
| Cow position: | chr12:5905833-5906100 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 78, 49 |
| Conread position: | 6-270 |
| Cow position: | chr12:26223208-26222946 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 67, 28 |
| Conread position: | 6-272 |
| Cow position: | chr12:4341944-4341698 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 6-272 |
| Cow position: | chr12:6210381-6210112 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 90, 49 |
| Conread position: | 6-272 |
| Cow position: | chr12:30753498-30753765 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 77, 40 |
| Conread position: | 6-272 |
| Cow position: | chr12:42181365-42181083 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 6-273 |
| Cow position: | chr12:30590552-30590814 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 41, 82 |
| Conread position: | 6-327 |
| Cow position: | chr12:40910515-40910182 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 43 |
| Conread position: | 6-370 |
| Cow position: | chr12:5539189-5538820 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 258 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 90, 31 |
| Conread position: | 7-194 |
| Cow position: | chr12:6117677-6117873 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 27, 50 |
| Conread position: | 7-198 |
| Cow position: | chr12:48405904-48406091 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 127, 48 |
| Conread position: | 7-214 |
| Cow position: | chr12:16631717-16631922 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 91, 46 |
| Conread position: | 7-227 |
| Cow position: | chr12:6164247-6164021 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 90, 14 |
| Conread position: | 7-234 |
| Cow position: | chr12:1487814-1488055 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 36, 60 |
| Conread position: | 7-272 |
| Cow position: | chr12:29969353-29969625 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 27, 52 |
| Conread position: | 7-273 |
| Cow position: | chr12:5146608-5146864 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 107, 49 |
| Conread position: | 7-292 |
| Cow position: | chr12:1889803-1889509 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 93, 48 |
| Conread position: | 7-292 |
| Cow position: | chr12:16851232-16850945 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 85, 48 |
| Conread position: | 7-353 |
| Cow position: | chr12:16543792-16543442 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 45 |
| Conread position: | 7-356 |
| Cow position: | chr12:48425498-48425849 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 257 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 27, 52 |
| Conread position: | 7-362 |
| Cow position: | chr12:27055383-27055748 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 47 |
| Conread position: | 7-363 |
| Cow position: | chr12:5797767-5797423 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 75, 43 |
| Conread position: | 7-367 |
| Cow position: | chr12:33457924-33458290 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 22 |
| Conread position: | 9-272 |
| Cow position: | chr12:33851139-33851403 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 87, 12 |
| Conread position: | 9-364 |
| Cow position: | chr12:5714406-5714784 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 5, 47 |
| Conread position: | 9-366 |
| Cow position: | chr12:1030758-1031132 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 8, 51 |
| Conread position: | 9-367 |
| Cow position: | chr12:31198545-31198916 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 43 |
| Conread position: | 10-358 |
| Cow position: | chr12:27803270-27802913 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 20, 49 |
| Conread position: | 11-365 |
| Cow position: | chr12:34850059-34849711 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 149, 45 |
| Conread position: | 11-365 |
| Cow position: | chr12:34852698-34852348 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 240 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 92, 45 |
| Conread position: | 11-366 |
| Cow position: | chr12:9229701-9229348 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 247 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 89, 44 |
| Conread position: | 11-396 |
| Cow position: | chr12:24559138-24559535 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 44 |
| Conread position: | 12-363 |
| Cow position: | chr12:29448430-29448790 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 266 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 75, 9 |
| Conread position: | 13-217 |
| Cow position: | chr12:17495409-17495217 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 13-244 |
| Cow position: | chr12:12031051-12030810 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 49, 32 |
| Conread position: | 13-252 |
| Cow position: | chr12:41091312-41091559 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 19, 46 |
| Conread position: | 13-265 |
| Cow position: | chr12:31947906-31948157 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 83, 33 |
| Conread position: | 13-272 |
| Cow position: | chr12:38484620-38484348 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 21, 47 |
| Conread position: | 13-272 |
| Cow position: | chr12:44517953-44517692 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 74, 42 |
| Conread position: | 13-289 |
| Cow position: | chr12:30662166-30661887 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 62, 42 |
| Conread position: | 13-323 |
| Cow position: | chr12:22881830-22882152 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 53 |
| Conread position: | 13-353 |
| Cow position: | chr12:30596250-30596605 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 262 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 71, 43 |
| Conread position: | 13-366 |
| Cow position: | chr12:34466219-34465850 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 30, 64 |
| Conread position: | 15-173 |
| Cow position: | chr12:35807462-35807630 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 44 |
| Conread position: | 15-193 |
| Cow position: | chr12:34103350-34103164 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 70, 48 |
| Conread position: | 15-268 |
| Cow position: | chr12:9914576-9914831 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 67, 12 |
| Conread position: | 15-272 |
| Cow position: | chr12:6410943-6410688 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 81, 35 |
| Conread position: | 15-289 |
| Cow position: | chr12:8943436-8943158 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 47, 33 |
| Conread position: | 15-363 |
| Cow position: | chr12:47803940-47804300 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 250 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 64, 42 |
| Conread position: | 15-365 |
| Cow position: | chr12:18769289-18768924 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 40 |
| Conread position: | 16-201 |
| Cow position: | chr12:33403231-33403050 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 150, 40 |
| Conread position: | 16-252 |
| Cow position: | chr12:45160721-45160493 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 83, 5 |
| Conread position: | 16-258 |
| Cow position: | chr12:24107751-24107510 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 70, 5 |
| Conread position: | 16-272 |
| Cow position: | chr12:23574556-23574809 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 80, 40 |
| Conread position: | 16-366 |
| Cow position: | chr12:1223557-1223199 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 74, 10 |
| Conread position: | 16-367 |
| Cow position: | chr12:25619591-25619228 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 69, 39 |
| Conread position: | 16-367 |
| Cow position: | chr12:34161205-34161572 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 83, 30 |
| Conread position: | 17-328 |
| Cow position: | chr12:20312380-20312084 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 87, 46 |
| Conread position: | 17-354 |
| Cow position: | chr12:12331714-12331372 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 9 |
| Conread position: | 17-356 |
| Cow position: | chr12:41642222-41642571 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 17-360 |
| Cow position: | chr12:30064731-30065076 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 17, 41 |
| Conread position: | 18-268 |
| Cow position: | chr12:33323711-33323454 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 40, 29 |
| Conread position: | 18-283 |
| Cow position: | chr12:8869092-8868822 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 16, 40 |
| Conread position: | 18-355 |
| Cow position: | chr12:37727934-37728286 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 81, 28 |
| Conread position: | 18-355 |
| Cow position: | chr12:37732990-37732639 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 81, 28 |
| Conread position: | 19-166 |
| Cow position: | chr12:11696464-11696623 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 19-364 |
| Cow position: | chr12:23983453-23983811 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 43, 130 |
| Conread position: | 21-192 |
| Cow position: | chr12:44439057-44438889 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 138, 34 |
| Conread position: | 21-266 |
| Cow position: | chr12:18518457-18518713 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 71, 34 |
| Conread position: | 21-272 |
| Cow position: | chr12:4768715-4768971 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 14, 36 |
| Conread position: | 21-272 |
| Cow position: | chr12:28559090-28559340 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 198 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 96, 29 |
| Conread position: | 21-292 |
| Cow position: | chr12:23855623-23855901 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 22, 44 |
| Conread position: | 21-359 |
| Cow position: | chr12:39465373-39465726 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 81, 34 |
| Conread position: | 21-377 |
| Cow position: | chr12:5899323-5899669 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 105, 35 |
| Conread position: | 21-377 |
| Cow position: | chr12:25312581-25312215 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 264 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 71, 34 |
| Conread position: | 24-272 |
| Cow position: | chr12:30438039-30438283 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 72, 31 |
| Conread position: | 24-364 |
| Cow position: | chr12:31429776-31429426 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 250 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 73, 31 |
| Conread position: | 24-365 |
| Cow position: | chr12:45226189-45225841 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 89, 26 |
| Conread position: | 25-158 |
| Cow position: | chr12:18081752-18081615 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 61, 30 |
| Conread position: | 25-272 |
| Cow position: | chr12:17881657-17881907 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 71, 31 |
| Conread position: | 30-268 |
| Cow position: | chr12:3906272-3906515 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 25 |
| Conread position: | 30-292 |
| Cow position: | chr12:26218024-26217755 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 18, 8 |
| Conread position: | 30-350 |
| Cow position: | chr12:32413311-32413650 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 251 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 68, 25 |
| Conread position: | 30-361 |
| Cow position: | chr12:8595692-8596024 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 50, 25 |
| Conread position: | 32-363 |
| Cow position: | chr12:19715233-19714896 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 68, 23 |
| Conread position: | 33-272 |
| Cow position: | chr12:25452641-25452401 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 52, 22 |
| Conread position: | 36-226 |
| Cow position: | chr12:29921975-29921785 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 11 |
| Conread position: | 44-366 |
| Cow position: | chr12:15231002-15230671 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 42, 5 |
| Conread position: | 61-252 |
| Cow position: | chr12:40028931-40028728 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 61-285 |
| Cow position: | chr12:16327328-16327553 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 5 |
| Conread position: | 61-290 |
| Cow position: | chr12:38774411-38774176 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 23, 97 |
| Conread position: | 61-346 |
| Cow position: | chr12:27365755-27366055 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 39, 148 |
| Conread position: | 63-362 |
| Cow position: | chr12:25606537-25606852 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 28 |
| Conread position: | 76-289 |
| Cow position: | chr12:31517320-31517105 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 77-366 |
| Cow position: | chr12:22689591-22689882 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 22, 138 |
| Conread position: | 84-327 |
| Cow position: | chr12:14325412-14325162 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 103 |
| Conread position: | 85-272 |
| Cow position: | chr12:7110061-7110243 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 70 |
| Conread position: | 90-277 |
| Cow position: | chr12:10394898-10395087 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 168 |
| Conread position: | 93-254 |
| Cow position: | chr12:41596684-41596847 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 94-264 |
| Cow position: | chr12:7000734-7000566 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 64 |
| Conread position: | 98-264 |
| Cow position: | chr12:10942159-10942325 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 5, 61 |
| Conread position: | 98-365 |
| Cow position: | chr12:42918345-42918612 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 44, 123 |
| Conread position: | 99-289 |
| Cow position: | chr12:3197146-3197331 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 52, 61 |
| Conread position: | 106-365 |
| Cow position: | chr12:17110007-17109748 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 166, 57 |
| Conread position: | 108-365 |
| Cow position: | chr12:40931728-40931467 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 174, 19 |
| Conread position: | 111-365 |
| Cow position: | chr12:7996301-7996559 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 164, 26 |
| Conread position: | 115-363 |
| Cow position: | chr12:5658857-5658600 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 97, 129 |
| Conread position: | 118-363 |
| Cow position: | chr12:749263-749504 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 176, 9 |
| Conread position: | 119-337 |
| Cow position: | chr12:31528955-31528735 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 141, 40 |
| Conread position: | 121-364 |
| Cow position: | chr12:5680578-5680831 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 48, 40 |
| Conread position: | 122-234 |
| Cow position: | chr12:33757014-33756902 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 126-367 |
| Cow position: | chr12:4582847-4583092 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 144, 35 |
| Conread position: | 129-362 |
| Cow position: | chr12:42477918-42478155 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 145, 30 |
| Conread position: | 144-354 |
| Cow position: | chr12:47486751-47486971 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 5 |
| Conread position: | 164-360 |
| Cow position: | chr12:3816423-3816630 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 170-366 |
| Cow position: | chr12:5497877-5497680 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 101, 48 |
| Conread position: | 175-364 |
| Cow position: | chr12:44907966-44908163 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 99, 40 |
| Conread position: | 190-388 |
| Cow position: | chr12:23734349-23734549 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 79, 181 |
| Conread position: | 191-366 |
| Cow position: | chr12:39781374-39781191 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 83, 64 |
Show alignments to all cow chromosomes.