Cow genome map
| Conread name: | mA2-MI-P-A2-aex-a-09-1-UM.s1 |
| Conread position: | 4-359 |
| Cow position: | chr17:36217332-36216965 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 258 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 30, 166 |
| Conread position: | 6-197 |
| Cow position: | chr17:5246750-5246944 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 75, 49 |
| Conread position: | 6-197 |
| Cow position: | chr17:21312950-21312759 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 90, 40 |
| Conread position: | 6-258 |
| Cow position: | chr17:7132601-7132328 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 11, 54 |
| Conread position: | 6-266 |
| Cow position: | chr17:12536613-12536346 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 90, 49 |
| Conread position: | 6-266 |
| Cow position: | chr17:24824107-24824361 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 90, 45 |
| Conread position: | 6-266 |
| Cow position: | chr17:38646919-38647180 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 90, 36 |
| Conread position: | 6-268 |
| Cow position: | chr17:10459081-10458811 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 94, 22 |
| Conread position: | 6-271 |
| Cow position: | chr17:14848668-14848422 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 163, 26 |
| Conread position: | 6-272 |
| Cow position: | chr17:6328963-6329240 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 41, 166 |
| Conread position: | 6-272 |
| Cow position: | chr17:20993184-20992917 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 77, 15 |
| Conread position: | 6-272 |
| Cow position: | chr17:22806686-22806418 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 28, 54 |
| Conread position: | 6-272 |
| Cow position: | chr17:30665127-30665397 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 77, 25 |
| Conread position: | 6-273 |
| Cow position: | chr17:11281252-11280974 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 68, 45 |
| Conread position: | 6-307 |
| Cow position: | chr17:30718564-30718259 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 76, 49 |
| Conread position: | 6-363 |
| Cow position: | chr17:11171650-11172010 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 98, 57 |
| Conread position: | 6-400 |
| Cow position: | chr17:9565164-9565550 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 81, 49 |
| Conread position: | 7-201 |
| Cow position: | chr17:13236869-13236668 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 19, 50 |
| Conread position: | 7-201 |
| Cow position: | chr17:36533230-36533425 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 55, 41 |
| Conread position: | 7-207 |
| Cow position: | chr17:33926269-33926063 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 21, 51 |
| Conread position: | 7-216 |
| Cow position: | chr17:42435776-42435573 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 7-228 |
| Cow position: | chr17:2006559-2006775 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 133, 39 |
| Conread position: | 7-268 |
| Cow position: | chr17:11304893-11305151 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 90, 23 |
| Conread position: | 7-268 |
| Cow position: | chr17:20780371-20780636 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 89, 14 |
| Conread position: | 7-272 |
| Cow position: | chr17:4213617-4213868 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 214, 14 |
| Conread position: | 7-294 |
| Cow position: | chr17:8926364-8926068 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 36, 31 |
| Conread position: | 7-348 |
| Cow position: | chr17:21739023-21738672 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 81, 14 |
| Conread position: | 7-359 |
| Cow position: | chr17:37778761-37778414 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 85, 27 |
| Conread position: | 7-361 |
| Cow position: | chr17:20216027-20216390 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 19 |
| Conread position: | 7-362 |
| Cow position: | chr17:9748626-9748974 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 263 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 267, 31 |
| Conread position: | 7-363 |
| Cow position: | chr17:24580444-24580071 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 257 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 40, 152 |
| Conread position: | 7-364 |
| Cow position: | chr17:27504982-27505322 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 267, 49 |
| Conread position: | 7-365 |
| Cow position: | chr17:8279853-8279488 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 49 |
| Conread position: | 7-366 |
| Cow position: | chr17:23147284-23147646 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 142 |
| Conread position: | 7-429 |
| Cow position: | chr17:19891471-19891906 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 60 |
| Conread position: | 9-366 |
| Cow position: | chr17:41290164-41289797 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 27, 48 |
| Conread position: | 10-204 |
| Cow position: | chr17:8214782-8214968 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 20, 49 |
| Conread position: | 10-265 |
| Cow position: | chr17:18824649-18824904 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 82, 45 |
| Conread position: | 10-272 |
| Cow position: | chr17:9853850-9854101 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 86, 11 |
| Conread position: | 10-362 |
| Cow position: | chr17:27429442-27429799 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 84, 14 |
| Conread position: | 10-362 |
| Cow position: | chr17:37415041-37414679 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 49 |
| Conread position: | 11-154 |
| Cow position: | chr17:15133016-15133159 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 45 |
| Conread position: | 11-363 |
| Cow position: | chr17:5144307-5143928 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 254 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 68, 53 |
| Conread position: | 13-219 |
| Cow position: | chr17:3781907-3782119 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 87, 42 |
| Conread position: | 13-223 |
| Cow position: | chr17:37342620-37342411 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 69, 42 |
| Conread position: | 13-252 |
| Cow position: | chr17:18860857-18860616 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 33 |
| Conread position: | 13-264 |
| Cow position: | chr17:1035739-1035480 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 42, 33 |
| Conread position: | 13-268 |
| Cow position: | chr17:27058691-27058436 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 83, 33 |
| Conread position: | 13-272 |
| Cow position: | chr17:9911627-9911882 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 89, 42 |
| Conread position: | 13-276 |
| Cow position: | chr17:28539890-28540158 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 13, 43 |
| Conread position: | 13-364 |
| Cow position: | chr17:1783747-1783381 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 21, 46 |
| Conread position: | 13-366 |
| Cow position: | chr17:27819166-27819519 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 39, 8 |
| Conread position: | 15-217 |
| Cow position: | chr17:7047675-7047484 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 15-222 |
| Cow position: | chr17:23879962-23879746 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 19, 44 |
| Conread position: | 15-266 |
| Cow position: | chr17:41811681-41811927 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 19, 44 |
| Conread position: | 15-271 |
| Cow position: | chr17:25707819-25708079 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 18, 45 |
| Conread position: | 15-293 |
| Cow position: | chr17:26084898-26085170 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 70, 36 |
| Conread position: | 15-361 |
| Cow position: | chr17:4141014-4140675 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 62, 36 |
| Conread position: | 15-363 |
| Cow position: | chr17:18245939-18246290 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 12, 42 |
| Conread position: | 15-367 |
| Cow position: | chr17:18173941-18173602 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 40 |
| Conread position: | 16-266 |
| Cow position: | chr17:24587488-24587743 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 79, 5 |
| Conread position: | 16-272 |
| Cow position: | chr17:11156623-11156369 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 81, 5 |
| Conread position: | 16-272 |
| Cow position: | chr17:41892198-41891936 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 84, 8 |
| Conread position: | 16-361 |
| Cow position: | chr17:144310-143957 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 18, 41 |
| Conread position: | 16-363 |
| Cow position: | chr17:32457714-32457346 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 72, 39 |
| Conread position: | 16-365 |
| Cow position: | chr17:923743-924109 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 61, 31 |
| Conread position: | 17-167 |
| Cow position: | chr17:2079626-2079784 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 75, 46 |
| Conread position: | 17-208 |
| Cow position: | chr17:1526492-1526290 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 42 |
| Conread position: | 17-261 |
| Cow position: | chr17:12108667-12108918 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 17, 42 |
| Conread position: | 17-272 |
| Cow position: | chr17:21812283-21812027 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 17, 43 |
| Conread position: | 17-272 |
| Cow position: | chr17:23205901-23206143 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 136, 23 |
| Conread position: | 17-283 |
| Cow position: | chr17:27048025-27048294 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 66, 29 |
| Conread position: | 17-345 |
| Cow position: | chr17:35212232-35212563 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 237 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 70, 38 |
| Conread position: | 17-353 |
| Cow position: | chr17:33999178-33998846 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 243 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 70, 38 |
| Conread position: | 17-364 |
| Cow position: | chr17:20653031-20652678 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 17, 43 |
| Conread position: | 17-366 |
| Cow position: | chr17:23246076-23246433 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 30, 47 |
| Conread position: | 17-366 |
| Cow position: | chr17:35388147-35387773 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 262 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 66, 38 |
| Conread position: | 18-267 |
| Cow position: | chr17:12554829-12554590 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 138, 38 |
| Conread position: | 19-242 |
| Cow position: | chr17:20208953-20208734 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 82, 37 |
| Conread position: | 20-272 |
| Cow position: | chr17:22564050-22564309 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 63, 35 |
| Conread position: | 20-358 |
| Cow position: | chr17:24880613-24880960 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 28 |
| Conread position: | 21-272 |
| Cow position: | chr17:7251920-7252161 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 100, 35 |
| Conread position: | 21-356 |
| Cow position: | chr17:37138631-37138971 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 62, 19 |
| Conread position: | 21-361 |
| Cow position: | chr17:7614508-7614154 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 22-253 |
| Cow position: | chr17:13989300-13989066 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 99, 41 |
| Conread position: | 22-292 |
| Cow position: | chr17:6848676-6848942 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 74, 33 |
| Conread position: | 25-358 |
| Cow position: | chr17:32348948-32349287 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 75, 30 |
| Conread position: | 25-367 |
| Cow position: | chr17:30539377-30539051 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 239 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 71, 30 |
| Conread position: | 26-371 |
| Cow position: | chr17:23803333-23803688 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 66, 30 |
| Conread position: | 28-364 |
| Cow position: | chr17:18569041-18568721 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 76, 27 |
| Conread position: | 30-365 |
| Cow position: | chr17:26162547-26162199 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 256 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 59, 27 |
| Conread position: | 30-365 |
| Cow position: | chr17:28359724-28360055 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 62, 25 |
| Conread position: | 34-272 |
| Cow position: | chr17:11216008-11215769 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 34-323 |
| Cow position: | chr17:21373563-21373859 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 35-272 |
| Cow position: | chr17:9056814-9056573 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 20, 127 |
| Conread position: | 40-428 |
| Cow position: | chr17:10423972-10424348 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 54-359 |
| Cow position: | chr17:11344119-11344426 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 43, 10 |
| Conread position: | 59-272 |
| Cow position: | chr17:21922716-21922509 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 48 |
| Conread position: | 60-272 |
| Cow position: | chr17:21489717-21489500 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 23, 108 |
| Conread position: | 60-354 |
| Cow position: | chr17:39016006-39016313 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 56, 30 |
| Conread position: | 61-216 |
| Cow position: | chr17:3466740-3466897 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 120 |
| Conread position: | 61-272 |
| Cow position: | chr17:11832211-11831990 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 61-337 |
| Cow position: | chr17:34751497-34751209 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 36, 103 |
| Conread position: | 61-356 |
| Cow position: | chr17:5787926-5787619 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 21, 40 |
| Conread position: | 61-358 |
| Cow position: | chr17:7654547-7654249 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 21, 197 |
| Conread position: | 61-363 |
| Cow position: | chr17:6570230-6569923 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 19, 106 |
| Conread position: | 61-364 |
| Cow position: | chr17:38363078-38362768 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 35, 99 |
| Conread position: | 62-186 |
| Cow position: | chr17:20608452-20608588 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 62-283 |
| Cow position: | chr17:39857302-39857524 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 107 |
| Conread position: | 62-364 |
| Cow position: | chr17:3042382-3042703 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 30, 152 |
| Conread position: | 63-288 |
| Cow position: | chr17:27203134-27202902 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 98 |
| Conread position: | 63-366 |
| Cow position: | chr17:2034446-2034745 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 37, 96 |
| Conread position: | 65-292 |
| Cow position: | chr17:20848434-20848670 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 93 |
| Conread position: | 67-344 |
| Cow position: | chr17:27257318-27257012 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 71-272 |
| Cow position: | chr17:38263568-38263365 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 29, 11 |
| Conread position: | 72-365 |
| Cow position: | chr17:5167138-5166851 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 214 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 42, 16 |
| Conread position: | 75-293 |
| Cow position: | chr17:5986145-5985924 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 17, 145 |
| Conread position: | 76-272 |
| Cow position: | chr17:5350195-5349999 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 20, 38 |
| Conread position: | 76-364 |
| Cow position: | chr17:36400029-36400323 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 27, 72 |
| Conread position: | 80-272 |
| Cow position: | chr17:8293845-8293656 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 155, 37 |
| Conread position: | 80-330 |
| Cow position: | chr17:4085686-4085947 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 36, 101 |
| Conread position: | 82-272 |
| Cow position: | chr17:25126291-25126475 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 21, 7 |
| Conread position: | 85-272 |
| Cow position: | chr17:31856611-31856798 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 77 |
| Conread position: | 90-346 |
| Cow position: | chr17:5360495-5360245 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 23, 16 |
| Conread position: | 92-292 |
| Cow position: | chr17:1455987-1455795 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 178, 9 |
| Conread position: | 93-293 |
| Cow position: | chr17:5296908-5296709 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 65, 123 |
| Conread position: | 93-360 |
| Cow position: | chr17:33903973-33903702 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 123 |
| Conread position: | 93-365 |
| Cow position: | chr17:2270945-2271223 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 163 |
| Conread position: | 93-367 |
| Cow position: | chr17:13716090-13715806 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 10, 156 |
| Conread position: | 94-289 |
| Cow position: | chr17:13601024-13600835 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 176, 23 |
| Conread position: | 98-367 |
| Cow position: | chr17:7205371-7205648 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 9, 65 |
| Conread position: | 101-289 |
| Cow position: | chr17:4891409-4891218 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 19, 60 |
| Conread position: | 102-370 |
| Cow position: | chr17:10886448-10886180 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 168, 88 |
| Conread position: | 104-261 |
| Cow position: | chr17:33138635-33138791 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 6, 37 |
| Conread position: | 117-272 |
| Cow position: | chr17:28814526-28814368 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 117-364 |
| Cow position: | chr17:7567421-7567182 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 175, 38 |
| Conread position: | 124-272 |
| Cow position: | chr17:7851067-7851212 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 126-361 |
| Cow position: | chr17:38139488-38139731 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 144, 129 |
| Conread position: | 128-365 |
| Cow position: | chr17:36818019-36818263 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 36, 129 |
| Conread position: | 133-370 |
| Cow position: | chr17:31798462-31798217 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 44, 28 |
| Conread position: | 141-361 |
| Cow position: | chr17:13229373-13229600 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 129, 45 |
| Conread position: | 145-360 |
| Cow position: | chr17:25169078-25169291 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 125, 12 |
| Conread position: | 146-351 |
| Cow position: | chr17:10220851-10221062 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 138, 36 |
| Conread position: | 150-338 |
| Cow position: | chr17:33913573-33913374 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 154-366 |
| Cow position: | chr17:14278069-14278291 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 159-361 |
| Cow position: | chr17:12342468-12342260 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 111, 5 |
| Conread position: | 161-364 |
| Cow position: | chr17:7519404-7519610 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 110, 144 |
| Conread position: | 161-366 |
| Cow position: | chr17:3620071-3619859 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 169 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 109, 24 |
| Conread position: | 163-365 |
| Cow position: | chr17:10769495-10769283 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 165-358 |
| Cow position: | chr17:34870098-34870303 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 63 |
| Conread position: | 166-362 |
| Cow position: | chr17:10314440-10314645 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 108, 89 |
| Conread position: | 170-366 |
| Cow position: | chr17:11655401-11655606 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 100, 12 |
| Conread position: | 184-358 |
| Cow position: | chr17:19239842-19239660 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 86, 32 |
| Conread position: | 200-385 |
| Cow position: | chr17:7163842-7163647 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 72, 167 |
Show alignments to all cow chromosomes.