Cow genome map
| Conread name: | mA2-MI-P-A2-aex-a-09-1-UM.s1 |
| Conread position: | 5-216 |
| Cow position: | chr21:28998026-28997806 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 6, 51 |
| Conread position: | 6-225 |
| Cow position: | chr21:24642397-24642622 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 15 |
| Conread position: | 6-227 |
| Cow position: | chr21:19363586-19363356 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 96, 57 |
| Conread position: | 6-228 |
| Cow position: | chr21:15584536-15584315 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 90, 30 |
| Conread position: | 6-264 |
| Cow position: | chr21:14452114-14452374 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 92, 49 |
| Conread position: | 6-266 |
| Cow position: | chr21:12462093-12461824 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 15, 50 |
| Conread position: | 6-272 |
| Cow position: | chr21:3585481-3585220 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 90, 15 |
| Conread position: | 6-272 |
| Cow position: | chr21:4399677-4399951 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 87, 23 |
| Conread position: | 6-272 |
| Cow position: | chr21:13365222-13365490 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 47, 37 |
| Conread position: | 6-272 |
| Cow position: | chr21:15611029-15611288 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 86, 51 |
| Conread position: | 6-272 |
| Cow position: | chr21:23586754-23587030 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 41, 179 |
| Conread position: | 6-272 |
| Cow position: | chr21:28734034-28733765 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 76, 49 |
| Conread position: | 6-272 |
| Cow position: | chr21:30607210-30606938 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 90, 40 |
| Conread position: | 6-283 |
| Cow position: | chr21:42135746-42135454 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 6-289 |
| Cow position: | chr21:27229917-27229627 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 96, 53 |
| Conread position: | 6-289 |
| Cow position: | chr21:46849245-46848963 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 77, 46 |
| Conread position: | 6-299 |
| Cow position: | chr21:33562891-33563177 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 72, 49 |
| Conread position: | 6-361 |
| Cow position: | chr21:29978885-29978511 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 256 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 39, 168 |
| Conread position: | 6-362 |
| Cow position: | chr21:22353357-22352989 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 258 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 28, 53 |
| Conread position: | 6-372 |
| Cow position: | chr21:28923994-28924362 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 77, 51 |
| Conread position: | 6-383 |
| Cow position: | chr21:17428376-17428763 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 268 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 28, 53 |
| Conread position: | 7-198 |
| Cow position: | chr21:20426411-20426604 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 101, 26 |
| Conread position: | 7-207 |
| Cow position: | chr21:49662239-49662038 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 74, 48 |
| Conread position: | 7-219 |
| Cow position: | chr21:16166754-16166545 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 7-266 |
| Cow position: | chr21:643211-643466 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 7, 40 |
| Conread position: | 7-272 |
| Cow position: | chr21:47764234-47763970 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 89, 40 |
| Conread position: | 7-292 |
| Cow position: | chr21:23785908-23786202 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 91, 49 |
| Conread position: | 7-293 |
| Cow position: | chr21:28989491-28989785 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 25, 50 |
| Conread position: | 7-335 |
| Cow position: | chr21:34159838-34160170 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 21, 49 |
| Conread position: | 7-337 |
| Cow position: | chr21:35997052-35997394 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 85, 48 |
| Conread position: | 7-348 |
| Cow position: | chr21:12087470-12087829 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 259 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 51, 37 |
| Conread position: | 7-356 |
| Cow position: | chr21:21223168-21223522 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 52 |
| Conread position: | 7-360 |
| Cow position: | chr21:23801243-23800888 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 269 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 78, 27 |
| Conread position: | 7-362 |
| Cow position: | chr21:46242361-46241993 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 265 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 35, 18 |
| Conread position: | 7-365 |
| Cow position: | chr21:33727582-33727211 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 260 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 92, 25 |
| Conread position: | 7-366 |
| Cow position: | chr21:20418805-20418436 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 249 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 74, 17 |
| Conread position: | 7-368 |
| Cow position: | chr21:34739725-34740098 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 48 |
| Conread position: | 7-380 |
| Cow position: | chr21:18941950-18941570 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 14 |
| Conread position: | 8-196 |
| Cow position: | chr21:4568165-4568357 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 89, 47 |
| Conread position: | 9-264 |
| Cow position: | chr21:38482802-38483045 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 152, 47 |
| Conread position: | 9-272 |
| Cow position: | chr21:1591431-1591702 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 53, 46 |
| Conread position: | 9-272 |
| Cow position: | chr21:42414223-42413949 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 5, 57 |
| Conread position: | 9-362 |
| Cow position: | chr21:6697149-6696770 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 74, 46 |
| Conread position: | 10-272 |
| Cow position: | chr21:17643084-17642837 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 233, 11 |
| Conread position: | 10-272 |
| Cow position: | chr21:36795485-36795751 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 86, 26 |
| Conread position: | 11-292 |
| Cow position: | chr21:30835247-30835534 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 67, 46 |
| Conread position: | 12-216 |
| Cow position: | chr21:35061976-35062179 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 73, 43 |
| Conread position: | 12-216 |
| Cow position: | chr21:37845860-37845669 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 12-265 |
| Cow position: | chr21:11645081-11644825 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 42, 54 |
| Conread position: | 12-363 |
| Cow position: | chr21:33947355-33947007 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 165, 62 |
| Conread position: | 13-228 |
| Cow position: | chr21:29214264-29214056 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 92, 21 |
| Conread position: | 13-252 |
| Cow position: | chr21:33729319-33729558 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 69, 24 |
| Conread position: | 13-253 |
| Cow position: | chr21:12154020-12154262 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 13, 35 |
| Conread position: | 13-264 |
| Cow position: | chr21:22718896-22718644 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 32, 51 |
| Conread position: | 13-266 |
| Cow position: | chr21:20260436-20260177 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 84, 42 |
| Conread position: | 13-270 |
| Cow position: | chr21:33263734-33263990 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 91, 42 |
| Conread position: | 13-270 |
| Cow position: | chr21:44825999-44825740 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 83, 14 |
| Conread position: | 13-272 |
| Cow position: | chr21:6051391-6051651 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 32, 43 |
| Conread position: | 13-272 |
| Cow position: | chr21:42384390-42384656 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 34, 155 |
| Conread position: | 13-273 |
| Cow position: | chr21:19258711-19258967 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 51, 137 |
| Conread position: | 13-273 |
| Cow position: | chr21:27863635-27863364 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 13-278 |
| Cow position: | chr21:10005001-10004729 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 42, 35 |
| Conread position: | 13-292 |
| Cow position: | chr21:42841708-42841426 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 29 |
| Conread position: | 13-359 |
| Cow position: | chr21:46607701-46607349 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 70 |
| Conread position: | 13-364 |
| Cow position: | chr21:6619099-6618749 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 74, 43 |
| Conread position: | 13-364 |
| Cow position: | chr21:15911285-15911646 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 257 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 83, 18 |
| Conread position: | 13-366 |
| Cow position: | chr21:38900659-38901033 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 266 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 23, 46 |
| Conread position: | 15-177 |
| Cow position: | chr21:28944477-28944310 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 69, 36 |
| Conread position: | 15-216 |
| Cow position: | chr21:5425866-5426069 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 70, 40 |
| Conread position: | 15-218 |
| Cow position: | chr21:28993739-28993522 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 15-225 |
| Cow position: | chr21:8438921-8438723 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 15-293 |
| Cow position: | chr21:24698377-24698652 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 252, 41 |
| Conread position: | 15-347 |
| Cow position: | chr21:37941796-37941458 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 101, 41 |
| Conread position: | 15-359 |
| Cow position: | chr21:4276705-4276359 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 44 |
| Conread position: | 15-365 |
| Cow position: | chr21:47823385-47823013 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 23, 41 |
| Conread position: | 15-366 |
| Cow position: | chr21:11676156-11675802 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 255 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 102, 9 |
| Conread position: | 15-366 |
| Cow position: | chr21:44754890-44754538 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 51 |
| Conread position: | 16-203 |
| Cow position: | chr21:32665882-32665696 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 86, 5 |
| Conread position: | 16-219 |
| Cow position: | chr21:37282197-37282397 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 80, 40 |
| Conread position: | 16-279 |
| Cow position: | chr21:15976522-15976790 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 72, 24 |
| Conread position: | 16-286 |
| Cow position: | chr21:45473869-45473593 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 74, 39 |
| Conread position: | 16-292 |
| Cow position: | chr21:23322191-23321907 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 71, 5 |
| Conread position: | 16-300 |
| Cow position: | chr21:18845127-18844836 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 80, 39 |
| Conread position: | 17-204 |
| Cow position: | chr21:2412649-2412843 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 35, 43 |
| Conread position: | 17-362 |
| Cow position: | chr21:31662349-31662713 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 264 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 17, 42 |
| Conread position: | 17-364 |
| Cow position: | chr21:32574607-32574970 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 253 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 68, 38 |
| Conread position: | 17-366 |
| Cow position: | chr21:15742207-15741833 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 68, 21 |
| Conread position: | 17-366 |
| Cow position: | chr21:45355725-45356085 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 257 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 82, 38 |
| Conread position: | 18-253 |
| Cow position: | chr21:19052206-19052434 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 216, 38 |
| Conread position: | 18-363 |
| Cow position: | chr21:4723368-4723729 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 258 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 16, 41 |
| Conread position: | 19-368 |
| Cow position: | chr21:18378735-18379095 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 63, 36 |
| Conread position: | 19-376 |
| Cow position: | chr21:12301613-12301251 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 29 |
| Conread position: | 21-191 |
| Cow position: | chr21:42459646-42459469 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 93, 29 |
| Conread position: | 21-266 |
| Cow position: | chr21:31691375-31691624 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 81, 34 |
| Conread position: | 21-272 |
| Cow position: | chr21:11359934-11360184 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 79, 36 |
| Conread position: | 21-320 |
| Cow position: | chr21:30849052-30848745 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 14, 35 |
| Conread position: | 21-362 |
| Cow position: | chr21:13754686-13755028 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 240 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 76, 35 |
| Conread position: | 21-363 |
| Cow position: | chr21:9353337-9353696 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 70, 35 |
| Conread position: | 21-365 |
| Cow position: | chr21:6316102-6316460 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 56, 34 |
| Conread position: | 21-366 |
| Cow position: | chr21:25286406-25286765 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 34 |
| Conread position: | 21-366 |
| Cow position: | chr21:34565316-34564959 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 34 |
| Conread position: | 23-354 |
| Cow position: | chr21:49649529-49649855 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 240 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 60, 32 |
| Conread position: | 24-283 |
| Cow position: | chr21:42022186-42022437 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 79, 31 |
| Conread position: | 24-292 |
| Cow position: | chr21:3818103-3818379 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 55, 31 |
| Conread position: | 24-292 |
| Cow position: | chr21:26244818-26245085 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 7, 29 |
| Conread position: | 25-265 |
| Cow position: | chr21:28244368-28244611 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 71, 21 |
| Conread position: | 25-364 |
| Cow position: | chr21:8206669-8207025 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 60, 30 |
| Conread position: | 25-366 |
| Cow position: | chr21:33997329-33996980 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 30 |
| Conread position: | 26-293 |
| Cow position: | chr21:32904257-32903983 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 56, 30 |
| Conread position: | 26-366 |
| Cow position: | chr21:9940297-9939940 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 30 |
| Conread position: | 28-283 |
| Cow position: | chr21:22121422-22121665 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 240, 27 |
| Conread position: | 28-371 |
| Cow position: | chr21:31576410-31576744 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 254 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 242, 27 |
| Conread position: | 30-201 |
| Cow position: | chr21:17672737-17672569 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 30-272 |
| Cow position: | chr21:9416148-9416399 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 31-272 |
| Cow position: | chr21:7582003-7581757 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 24 |
| Conread position: | 31-372 |
| Cow position: | chr21:21181079-21181434 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 46, 25 |
| Conread position: | 34-220 |
| Cow position: | chr21:24865066-24865257 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 58, 22 |
| Conread position: | 34-364 |
| Cow position: | chr21:48291132-48290809 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 236, 18 |
| Conread position: | 36-272 |
| Cow position: | chr21:6997846-6998095 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 50, 10 |
| Conread position: | 40-354 |
| Cow position: | chr21:40769221-40769523 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 230, 15 |
| Conread position: | 48-367 |
| Cow position: | chr21:39528444-39528761 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 15, 45 |
| Conread position: | 61-272 |
| Cow position: | chr21:1511222-1511437 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 108 |
| Conread position: | 61-272 |
| Cow position: | chr21:5898468-5898254 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 35, 105 |
| Conread position: | 61-273 |
| Cow position: | chr21:30256339-30256125 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 16, 107 |
| Conread position: | 61-276 |
| Cow position: | chr21:44251904-44251691 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 35, 82 |
| Conread position: | 61-281 |
| Cow position: | chr21:44515194-44515422 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 32, 107 |
| Conread position: | 61-283 |
| Cow position: | chr21:22210313-22210084 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 39, 98 |
| Conread position: | 61-355 |
| Cow position: | chr21:38121032-38121338 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 106 |
| Conread position: | 61-361 |
| Cow position: | chr21:46552175-46551860 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 22, 122 |
| Conread position: | 61-364 |
| Cow position: | chr21:25800326-25800644 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 35, 100 |
| Conread position: | 61-367 |
| Cow position: | chr21:4098800-4099118 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 238 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 25, 164 |
| Conread position: | 61-373 |
| Cow position: | chr21:31661936-31662257 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 26, 49 |
| Conread position: | 62-273 |
| Cow position: | chr21:6652864-6652653 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 62, 36 |
| Conread position: | 66-366 |
| Cow position: | chr21:47715608-47715294 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 26, 87 |
| Conread position: | 67-360 |
| Cow position: | chr21:23397908-23397607 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 71-361 |
| Cow position: | chr21:26753440-26753732 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 199, 68 |
| Conread position: | 72-365 |
| Cow position: | chr21:3254093-3254402 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 28, 175 |
| Conread position: | 76-355 |
| Cow position: | chr21:15239238-15239517 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 195, 64 |
| Conread position: | 85-275 |
| Cow position: | chr21:28919561-28919374 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 75 |
| Conread position: | 85-283 |
| Cow position: | chr21:47363775-47363572 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 18, 67 |
| Conread position: | 88-268 |
| Cow position: | chr21:38774149-38774333 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 6, 145 |
| Conread position: | 92-366 |
| Cow position: | chr21:8420591-8420869 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 19, 160 |
| Conread position: | 98-362 |
| Cow position: | chr21:39509413-39509142 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 17, 8 |
| Conread position: | 101-366 |
| Cow position: | chr21:11019362-11019631 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 49 |
| Conread position: | 102-365 |
| Cow position: | chr21:37235366-37235632 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 74, 31 |
| Conread position: | 102-408 |
| Cow position: | chr21:42209650-42209330 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 166, 59 |
| Conread position: | 106-337 |
| Cow position: | chr21:37718459-37718229 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 172, 55 |
| Conread position: | 107-361 |
| Cow position: | chr21:13737034-13737294 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 19, 55 |
| Conread position: | 111-358 |
| Cow position: | chr21:36371476-36371723 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 149, 44 |
| Conread position: | 111-366 |
| Cow position: | chr21:6387990-6388240 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 22, 47 |
| Conread position: | 156-366 |
| Cow position: | chr21:8671429-8671642 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 117, 99 |
| Conread position: | 159-366 |
| Cow position: | chr21:7823396-7823605 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 97 |
| Conread position: | 197-362 |
| Cow position: | chr21:26147151-26147325 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 73, 18 |
| Conread position: | 202-366 |
| Cow position: | chr21:34649112-34648939 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 68, 138 |
Show alignments to all cow chromosomes.