Cow genome map

Conread name: mA2-MI-P-A2-aex-a-12-1-UM.s1

Conread position: 453-677
Cow position: chrX:13178715-13178490 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 98

Conread position: 454-676
Cow position: chrX:27977940-27977716 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 177

Conread position: 454-677
Cow position: chrX:41885285-41885061 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 147

Conread position: 459-677
Cow position: chrX:29047014-29047232 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 24

Conread position: 481-671
Cow position: chrX:4906066-4905876 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 173, 148

Conread position: 481-673
Cow position: chrX:2479707-2479515 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 481-673
Cow position: chrX:23039062-23038871 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 173, 48

Conread position: 481-673
Cow position: chrX:23342070-23341878 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 173, 166

Conread position: 481-674
Cow position: chrX:22616450-22616257 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 173, 152

Conread position: 481-677
Cow position: chrX:620340-620147 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 157
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 170, 75

Conread position: 481-677
Cow position: chrX:10413052-10412858 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 153
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 170, 22

Conread position: 481-677
Cow position: chrX:24109681-24109487 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 170, 62

Conread position: 482-673
Cow position: chrX:18950814-18950623 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 172, 147

Conread position: 482-677
Cow position: chrX:3372930-3372735 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 179, 147

Conread position: 482-677
Cow position: chrX:5289762-5289567 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 179, 147

Conread position: 482-677
Cow position: chrX:5647182-5646987 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 156, 147

Conread position: 482-677
Cow position: chrX:5866068-5866263 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 156, 147

Conread position: 482-677
Cow position: chrX:9642510-9642315 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 172, 147

Conread position: 482-677
Cow position: chrX:14125322-14125127 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 174, 147

Conread position: 482-677
Cow position: chrX:18024070-18023875 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 179, 147

Conread position: 482-677
Cow position: chrX:19398700-19398895 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 156, 145

Conread position: 482-677
Cow position: chrX:19474226-19474031 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 179, 147

Conread position: 482-677
Cow position: chrX:24769934-24769739 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 172, 147

Conread position: 482-677
Cow position: chrX:25289757-25289562 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 177, 147

Conread position: 482-677
Cow position: chrX:26760646-26760451 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 172, 147

Conread position: 482-677
Cow position: chrX:29930470-29930275 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 179, 147

Conread position: 482-677
Cow position: chrX:30053546-30053351 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 179, 147

Conread position: 482-677
Cow position: chrX:30200070-30199875 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 179, 147

Conread position: 482-677
Cow position: chrX:32064245-32064051 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 172, 84

Conread position: 483-677
Cow position: chrX:4406807-4407000 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 50

Conread position: 485-674
Cow position: chrX:24321703-24321514 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 176, 144

Conread position: 485-677
Cow position: chrX:9261339-9261532 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 152
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 167, 0

Conread position: 485-677
Cow position: chrX:11991225-11991040 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 166, 51

Conread position: 485-677
Cow position: chrX:30180999-30180807 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 169, 144

Conread position: 485-677
Cow position: chrX:39560734-39560542 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 169, 144

Conread position: 500-628
Cow position: chrX:27029071-27029198 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 500-660
Cow position: chrX:4558260-4558420 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 149, 133

Conread position: 500-677
Cow position: chrX:2560018-2559843 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 154, 35

Conread position: 500-677
Cow position: chrX:11499834-11499659 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 154, 95

Conread position: 500-677
Cow position: chrX:17782440-17782617 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 154, 129

Conread position: 500-677
Cow position: chrX:23986190-23986367 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 154, 129

Conread position: 503-673
Cow position: chrX:40560595-40560427 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 42, 33

Conread position: 509-677
Cow position: chrX:3418187-3418019 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 147, 120

Conread position: 509-677
Cow position: chrX:31978891-31978724 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 129, 94

Conread position: 524-677
Cow position: chrX:5280887-5280735 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 137, 8

Show alignments to all cow chromosomes.