Cow genome map
Conread name: | mA2-MI-P-A2-aex-a-12-1-UM.s1 |
Conread position: | 453-677 |
Cow position: | chrX:13178715-13178490 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 178 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 98 |
Conread position: | 454-676 |
Cow position: | chrX:27977940-27977716 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 159 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 24, 177 |
Conread position: | 454-677 |
Cow position: | chrX:41885285-41885061 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 181 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 147 |
Conread position: | 459-677 |
Cow position: | chrX:29047014-29047232 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 177 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 24 |
Conread position: | 481-671 |
Cow position: | chrX:4906066-4905876 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 133 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 173, 148 |
Conread position: | 481-673 |
Cow position: | chrX:2479707-2479515 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 135 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 481-673 |
Cow position: | chrX:23039062-23038871 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 133 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 173, 48 |
Conread position: | 481-673 |
Cow position: | chrX:23342070-23341878 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 134 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 173, 166 |
Conread position: | 481-674 |
Cow position: | chrX:22616450-22616257 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 142 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 173, 152 |
Conread position: | 481-677 |
Cow position: | chrX:620340-620147 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 157 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 170, 75 |
Conread position: | 481-677 |
Cow position: | chrX:10413052-10412858 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 153 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 170, 22 |
Conread position: | 481-677 |
Cow position: | chrX:24109681-24109487 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 148 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 170, 62 |
Conread position: | 482-673 |
Cow position: | chrX:18950814-18950623 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 138 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 172, 147 |
Conread position: | 482-677 |
Cow position: | chrX:3372930-3372735 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 140 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 179, 147 |
Conread position: | 482-677 |
Cow position: | chrX:5289762-5289567 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 139 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 179, 147 |
Conread position: | 482-677 |
Cow position: | chrX:5647182-5646987 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 145 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 156, 147 |
Conread position: | 482-677 |
Cow position: | chrX:5866068-5866263 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 143 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 156, 147 |
Conread position: | 482-677 |
Cow position: | chrX:9642510-9642315 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 146 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 172, 147 |
Conread position: | 482-677 |
Cow position: | chrX:14125322-14125127 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 139 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 174, 147 |
Conread position: | 482-677 |
Cow position: | chrX:18024070-18023875 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 145 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 179, 147 |
Conread position: | 482-677 |
Cow position: | chrX:19398700-19398895 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 145 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 156, 145 |
Conread position: | 482-677 |
Cow position: | chrX:19474226-19474031 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 143 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 179, 147 |
Conread position: | 482-677 |
Cow position: | chrX:24769934-24769739 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 143 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 172, 147 |
Conread position: | 482-677 |
Cow position: | chrX:25289757-25289562 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 143 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 177, 147 |
Conread position: | 482-677 |
Cow position: | chrX:26760646-26760451 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 141 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 172, 147 |
Conread position: | 482-677 |
Cow position: | chrX:29930470-29930275 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 145 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 179, 147 |
Conread position: | 482-677 |
Cow position: | chrX:30053546-30053351 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 144 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 179, 147 |
Conread position: | 482-677 |
Cow position: | chrX:30200070-30199875 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 143 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 179, 147 |
Conread position: | 482-677 |
Cow position: | chrX:32064245-32064051 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 139 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 172, 84 |
Conread position: | 483-677 |
Cow position: | chrX:4406807-4407000 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 159 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 50 |
Conread position: | 485-674 |
Cow position: | chrX:24321703-24321514 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 138 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 176, 144 |
Conread position: | 485-677 |
Cow position: | chrX:9261339-9261532 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 152 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 167, 0 |
Conread position: | 485-677 |
Cow position: | chrX:11991225-11991040 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 149 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 166, 51 |
Conread position: | 485-677 |
Cow position: | chrX:30180999-30180807 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 139 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 169, 144 |
Conread position: | 485-677 |
Cow position: | chrX:39560734-39560542 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 143 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 169, 144 |
Conread position: | 500-628 |
Cow position: | chrX:27029071-27029198 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 100 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 500-660 |
Cow position: | chrX:4558260-4558420 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 126 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 149, 133 |
Conread position: | 500-677 |
Cow position: | chrX:2560018-2559843 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 128 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 154, 35 |
Conread position: | 500-677 |
Cow position: | chrX:11499834-11499659 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 130 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 154, 95 |
Conread position: | 500-677 |
Cow position: | chrX:17782440-17782617 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 131 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 154, 129 |
Conread position: | 500-677 |
Cow position: | chrX:23986190-23986367 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 134 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 154, 129 |
Conread position: | 503-673 |
Cow position: | chrX:40560595-40560427 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 137 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 42, 33 |
Conread position: | 509-677 |
Cow position: | chrX:3418187-3418019 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 126 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 147, 120 |
Conread position: | 509-677 |
Cow position: | chrX:31978891-31978724 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 130 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 129, 94 |
Conread position: | 524-677 |
Cow position: | chrX:5280887-5280735 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 113 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 137, 8 |
Show alignments to all cow chromosomes.