Cow genome map
| Conread name: | mA2-MI-P-A2-aff-b-02-1-UM.s1 |
| Conread position: | 1-320 |
| Cow position: | chr14:3080032-3079712 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 282, 0 |
| Conread position: | 1-320 |
| Cow position: | chr14:3080704-3080384 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 283, 0 |
| Conread position: | 1-382 |
| Cow position: | chr14:3100863-3100482 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 280, 322 |
| Conread position: | 1-388 |
| Cow position: | chr14:3127964-3127578 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 48, 40 |
| Conread position: | 1-425 |
| Cow position: | chr14:3080452-3080033 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 155, 159 |
| Conread position: | 2-222 |
| Cow position: | chr14:3127711-3127491 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-351 |
| Cow position: | chr14:25794619-25794268 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 218 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 158, 153 |
| Conread position: | 3-351 |
| Cow position: | chr14:447649-447998 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 152, 157 |
| Conread position: | 5-317 |
| Cow position: | chr14:447567-447880 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 71, 65 |
| Conread position: | 5-320 |
| Cow position: | chr14:3080532-3080216 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 279, 0 |
| Conread position: | 5-320 |
| Cow position: | chr14:3080784-3080468 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 149, 157 |
| Conread position: | 5-321 |
| Cow position: | chr14:25784162-25784479 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 279, 0 |
| Conread position: | 6-234 |
| Cow position: | chr14:25859583-25859811 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-319 |
| Cow position: | chr14:25784331-25784645 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 228, 223 |
| Conread position: | 6-325 |
| Cow position: | chr14:25794867-25794546 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 262, 281 |
| Conread position: | 6-327 |
| Cow position: | chr14:25795371-25795049 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 105, 117 |
| Conread position: | 6-349 |
| Cow position: | chr14:25794951-25794607 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 70, 53 |
| Conread position: | 6-381 |
| Cow position: | chr14:25783659-25784034 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 288, 273 |
| Conread position: | 6-381 |
| Cow position: | chr14:25783995-25784370 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 236 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 278, 318 |
| Conread position: | 6-381 |
| Cow position: | chr14:25794699-25794323 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 105, 114 |
| Conread position: | 7-311 |
| Cow position: | chr14:25876971-25877276 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 76, 82 |
| Conread position: | 7-320 |
| Cow position: | chr14:3155389-3155703 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 277, 0 |
| Conread position: | 7-320 |
| Cow position: | chr14:3155878-3156192 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 148, 159 |
| Conread position: | 7-349 |
| Cow position: | chr14:25783324-25783667 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 52 |
| Conread position: | 8-189 |
| Cow position: | chr14:25837036-25837217 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-282 |
| Cow position: | chr14:3061676-3061402 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-282 |
| Cow position: | chr14:25860509-25860783 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 85, 65 |
| Conread position: | 8-312 |
| Cow position: | chr14:25859417-25859722 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 155, 148 |
| Conread position: | 8-317 |
| Cow position: | chr14:25836616-25836926 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 276, 0 |
| Conread position: | 8-317 |
| Cow position: | chr14:25859333-25859643 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 276, 0 |
| Conread position: | 8-317 |
| Cow position: | chr14:25860089-25860399 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 65, 82 |
| Conread position: | 8-317 |
| Cow position: | chr14:25910896-25911206 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 276, 0 |
| Conread position: | 8-318 |
| Cow position: | chr14:25895767-25896078 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 73, 65 |
| Conread position: | 8-319 |
| Cow position: | chr14:25860173-25860485 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 154, 147 |
| Conread position: | 8-319 |
| Cow position: | chr14:25877224-25877536 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 279, 0 |
| Conread position: | 8-320 |
| Cow position: | chr14:25876720-25877033 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 276, 0 |
| Conread position: | 8-320 |
| Cow position: | chr14:25877560-25877873 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 85, 65 |
| Conread position: | 8-321 |
| Cow position: | chr14:25783829-25784143 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 273, 0 |
| Conread position: | 8-321 |
| Cow position: | chr14:25836868-25837182 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 151, 147 |
| Conread position: | 8-321 |
| Cow position: | chr14:25877140-25877454 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 65, 82 |
| Conread position: | 8-321 |
| Cow position: | chr14:25895935-25896249 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 145, 156 |
| Conread position: | 8-324 |
| Cow position: | chr14:25876636-25876953 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 77, 83 |
| Conread position: | 8-335 |
| Cow position: | chr14:25876888-25877217 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 78, 86 |
| Conread position: | 8-351 |
| Cow position: | chr14:25795033-25794689 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 148, 153 |
| Conread position: | 8-365 |
| Cow position: | chr14:25836448-25836810 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 276, 0 |
| Conread position: | 8-382 |
| Cow position: | chr14:3156047-3156421 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 69, 61 |
| Conread position: | 8-407 |
| Cow position: | chr14:25895683-25896078 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 134, 141 |
| Conread position: | 8-411 |
| Cow position: | chr14:25876468-25876867 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 276, 314 |
| Conread position: | 8-429 |
| Cow position: | chr14:25836196-25836612 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 275 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 276, 316 |
| Conread position: | 14-311 |
| Cow position: | chr14:25910818-25911116 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 57, 69 |
| Conread position: | 15-311 |
| Cow position: | chr14:3127782-3127485 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 219, 214 |
| Conread position: | 18-320 |
| Cow position: | chr14:25859679-25859982 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 144, 135 |
| Conread position: | 18-324 |
| Cow position: | chr14:25836542-25836849 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 266, 0 |
Show alignments to all cow chromosomes.