Cow genome map
| Conread name: | mA2-MI-P-A2-aff-b-02-1-UM.s1 |
| Conread position: | 1-320 |
| Cow position: | chr19:23649697-23650017 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 154, 159 |
| Conread position: | 1-350 |
| Cow position: | chr19:23650033-23650383 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 57, 41 |
| Conread position: | 1-381 |
| Cow position: | chr19:23649529-23649909 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 230 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 155, 160 |
| Conread position: | 1-388 |
| Cow position: | chr19:14940215-14940601 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 249 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 280, 353 |
| Conread position: | 2-351 |
| Cow position: | chr19:14940468-14940818 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 282, 0 |
| Conread position: | 2-382 |
| Cow position: | chr19:14940636-14941016 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 282, 352 |
| Conread position: | 2-388 |
| Cow position: | chr19:23614248-23614633 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 279, 322 |
| Conread position: | 2-390 |
| Cow position: | chr19:14960331-14959945 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 115, 108 |
| Conread position: | 3-214 |
| Cow position: | chr19:23597426-23597637 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 159, 151 |
| Conread position: | 4-317 |
| Cow position: | chr19:20677761-20678075 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 257, 244 |
| Conread position: | 4-319 |
| Cow position: | chr19:23597343-23597659 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 280, 0 |
| Conread position: | 5-214 |
| Cow position: | chr19:20635402-20635193 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-279 |
| Cow position: | chr19:14959100-14958827 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 70, 66 |
| Conread position: | 6-299 |
| Cow position: | chr19:43569992-43569700 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 62, 53 |
| Conread position: | 6-319 |
| Cow position: | chr19:23614084-23614398 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 73, 53 |
| Conread position: | 6-322 |
| Cow position: | chr19:23613412-23613729 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 278, 0 |
| Conread position: | 6-372 |
| Cow position: | chr19:23614756-23615121 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 275, 317 |
| Conread position: | 6-426 |
| Cow position: | chr19:14960411-14959998 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 147, 156 |
| Conread position: | 7-320 |
| Cow position: | chr19:23614505-23614819 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 153, 138 |
| Conread position: | 7-325 |
| Cow position: | chr19:20677596-20677915 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 280, 0 |
| Conread position: | 7-367 |
| Cow position: | chr19:23649871-23650234 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 148, 155 |
| Conread position: | 7-385 |
| Cow position: | chr19:23649451-23649829 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 149 |
| Conread position: | 7-408 |
| Cow position: | chr19:23613749-23614146 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 249 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 67, 75 |
| Conread position: | 8-312 |
| Cow position: | chr19:23614590-23614895 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 147, 156 |
| Conread position: | 8-317 |
| Cow position: | chr19:23613918-23614228 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 276, 0 |
| Conread position: | 8-320 |
| Cow position: | chr19:23597179-23597492 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 276, 0 |
| Conread position: | 8-350 |
| Cow position: | chr19:23597095-23597438 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 153, 146 |
| Conread position: | 8-351 |
| Cow position: | chr19:23613582-23613926 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 276, 301 |
| Conread position: | 8-361 |
| Cow position: | chr19:14960075-14959720 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 145, 133 |
| Conread position: | 8-366 |
| Cow position: | chr19:43570242-43569881 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 69, 64 |
| Conread position: | 8-377 |
| Cow position: | chr19:14940138-14940511 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 147, 154 |
| Conread position: | 8-388 |
| Cow position: | chr19:14940390-14940769 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 145, 154 |
| Conread position: | 8-388 |
| Cow position: | chr19:23613666-23614045 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 245, 230 |
| Conread position: | 20-388 |
| Cow position: | chr19:23614014-23614381 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 48, 43 |
Show alignments to all cow chromosomes.