Cow genome map


           Conread name:
           mA2-MI-P-A2-aff-b-02-1-UM.s1
        

               Conread position:
               1-381
               

               Cow position:
               chr2:82799919-82800299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               152, 143
               

               Conread position:
               2-195
               

               Cow position:
               chr2:82800256-82800449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               140, 147
               

               Conread position:
               3-313
               

               Cow position:
               chr2:48689482-48689172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               86, 67
               

               Conread position:
               6-322
               

               Cow position:
               chr2:82799588-82799905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               138, 143
               

               Conread position:
               7-356
               

               Cow position:
               chr2:78754895-78755246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               224, 237
               

               Conread position:
               8-320
               

               Cow position:
               chr2:82799842-82800155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               145, 137
               

               Conread position:
               8-381
               

               Cow position:
               chr2:82799506-82799879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               237
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               275, 345
               

               Conread position:
               11-236
               

               Cow position:
               chr2:48689391-48689166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               146, 151
               

               Conread position:
               53-317
               

               Cow position:
               chr2:48689516-48689252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               30, 25
               
Show alignments to all cow chromosomes.