Cow genome map
| Conread name: | mA2-MI-P-A2-aff-b-02-1-UM.s1 |
| Conread position: | 1-202 |
| Cow position: | chr23:25626840-25627041 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 158, 143 |
| Conread position: | 1-273 |
| Cow position: | chr23:25698347-25698075 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 24, 41 |
| Conread position: | 1-321 |
| Cow position: | chr23:25660208-25660529 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 283, 0 |
| Conread position: | 1-321 |
| Cow position: | chr23:25660376-25660697 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 1-351 |
| Cow position: | chr23:24626365-24626716 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 283, 0 |
| Conread position: | 1-381 |
| Cow position: | chr23:24547021-24546641 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 160 |
| Conread position: | 1-425 |
| Cow position: | chr23:24639273-24639692 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 108, 119 |
| Conread position: | 2-205 |
| Cow position: | chr23:25723901-25723700 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 152, 160 |
| Conread position: | 2-303 |
| Cow position: | chr23:24626450-24626750 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 65, 57 |
| Conread position: | 2-351 |
| Cow position: | chr23:24547104-24546754 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 67, 61 |
| Conread position: | 3-278 |
| Cow position: | chr23:24639779-24640054 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 63, 56 |
| Conread position: | 3-367 |
| Cow position: | chr23:25698597-25698230 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 142, 158 |
| Conread position: | 5-292 |
| Cow position: | chr23:24654094-24654380 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 273, 0 |
| Conread position: | 6-202 |
| Cow position: | chr23:24560324-24560128 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 149, 156 |
| Conread position: | 6-240 |
| Cow position: | chr23:25626092-25626326 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 153, 147 |
| Conread position: | 6-294 |
| Cow position: | chr23:25698510-25698222 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 165, 150 |
| Conread position: | 6-317 |
| Cow position: | chr23:24535983-24535671 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 109, 117 |
| Conread position: | 6-318 |
| Cow position: | chr23:24639698-24640010 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 149, 156 |
| Conread position: | 6-358 |
| Cow position: | chr23:24522590-24522234 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 232 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 157, 148 |
| Conread position: | 6-367 |
| Cow position: | chr23:25626677-25627041 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 270, 0 |
| Conread position: | 7-233 |
| Cow position: | chr23:24654180-24654406 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-246 |
| Cow position: | chr23:24639867-24640106 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 69, 56 |
| Conread position: | 7-273 |
| Cow position: | chr23:24535730-24535464 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 66, 77 |
| Conread position: | 7-319 |
| Cow position: | chr23:24560491-24560178 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 277, 0 |
| Conread position: | 7-321 |
| Cow position: | chr23:24639531-24639846 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 56, 69 |
| Conread position: | 7-381 |
| Cow position: | chr23:24547267-24546893 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 347 |
| Conread position: | 8-278 |
| Cow position: | chr23:25660467-25660737 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 65, 73 |
| Conread position: | 8-317 |
| Cow position: | chr23:24535813-24535503 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 151, 146 |
| Conread position: | 8-321 |
| Cow position: | chr23:24560406-24560093 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 291, 277 |
| Conread position: | 8-351 |
| Cow position: | chr23:25626514-25626855 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 146, 70 |
| Conread position: | 8-351 |
| Cow position: | chr23:25626595-25626939 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 65, 75 |
| Conread position: | 8-365 |
| Cow position: | chr23:24560658-24560298 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 148 |
| Conread position: | 8-426 |
| Cow position: | chr23:24560574-24560161 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 346 |
| Conread position: | 8-428 |
| Cow position: | chr23:24639448-24639863 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 268 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 60, 68 |
| Conread position: | 9-410 |
| Cow position: | chr23:24639197-24639594 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 107, 114 |
| Conread position: | 13-320 |
| Cow position: | chr23:25724058-25723750 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 142, 149 |
| Conread position: | 13-321 |
| Cow position: | chr23:24560821-24560512 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 271, 0 |
| Conread position: | 17-367 |
| Cow position: | chr23:25626187-25626540 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 43 |
| Conread position: | 23-382 |
| Cow position: | chr23:24626303-24626662 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 45, 36 |
| Conread position: | 29-420 |
| Cow position: | chr23:24560889-24560503 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 126, 131 |
| Conread position: | 29-426 |
| Cow position: | chr23:24547329-24546937 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 255, 332 |
| Conread position: | 32-351 |
| Cow position: | chr23:24560718-24560398 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 123, 131 |
| Conread position: | 38-373 |
| Cow position: | chr23:24654043-24654379 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 243, 316 |
| Conread position: | 51-388 |
| Cow position: | chr23:25660174-25660510 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 220, 212 |
| Conread position: | 83-388 |
| Cow position: | chr23:24626279-24626583 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 72, 78 |
Show alignments to all cow chromosomes.