Cow genome map
| Conread name: | mA2-MI-P-A2-aff-b-02-1-UM.s1 |
| Conread position: | 1-317 |
| Cow position: | chr7:42878632-42878315 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 151, 161 |
| Conread position: | 1-317 |
| Cow position: | chr7:42878800-42878483 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 280, 0 |
| Conread position: | 1-317 |
| Cow position: | chr7:42878968-42878651 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 72, 77 |
| Conread position: | 1-318 |
| Cow position: | chr7:42878716-42878398 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 151, 159 |
| Conread position: | 1-390 |
| Cow position: | chr7:1014995-1015384 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 299, 284 |
| Conread position: | 2-320 |
| Cow position: | chr7:42879051-42878732 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 81, 57 |
| Conread position: | 2-351 |
| Cow position: | chr7:3180258-3180608 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 262, 269 |
| Conread position: | 4-390 |
| Cow position: | chr7:18390137-18390523 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 155, 150 |
| Conread position: | 5-277 |
| Cow position: | chr7:1014333-1014605 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 158, 151 |
| Conread position: | 5-317 |
| Cow position: | chr7:1015167-1015482 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 149, 155 |
| Conread position: | 5-381 |
| Cow position: | chr7:3179757-3180133 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 150, 157 |
| Conread position: | 6-320 |
| Cow position: | chr7:18390391-18390706 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 149, 156 |
| Conread position: | 7-317 |
| Cow position: | chr7:42879214-42878903 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 65, 71 |
| Conread position: | 7-318 |
| Cow position: | chr7:1014917-1015229 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 148, 155 |
| Conread position: | 7-318 |
| Cow position: | chr7:1439953-1440264 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 61, 18 |
| Conread position: | 7-321 |
| Cow position: | chr7:3180431-3180746 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 59, 52 |
| Conread position: | 7-339 |
| Cow position: | chr7:42879130-42878797 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 145, 153 |
| Conread position: | 7-425 |
| Cow position: | chr7:3180179-3180592 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 268 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 277, 352 |
| Conread position: | 7-426 |
| Cow position: | chr7:3179927-3180341 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 264 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 277, 347 |
| Conread position: | 8-189 |
| Cow position: | chr7:42878457-42878276 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 58, 51 |
| Conread position: | 8-274 |
| Cow position: | chr7:11600704-11600438 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 232, 238 |
| Conread position: | 8-317 |
| Cow position: | chr7:3180096-3180406 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 62, 76 |
| Conread position: | 8-317 |
| Cow position: | chr7:3180516-3180824 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 60, 51 |
| Conread position: | 8-319 |
| Cow position: | chr7:3179844-3180156 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 75, 66 |
| Conread position: | 8-381 |
| Cow position: | chr7:11601040-11600667 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 85, 64 |
| Conread position: | 10-321 |
| Cow position: | chr7:1014668-1014980 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 56, 66 |
| Conread position: | 14-385 |
| Cow position: | chr7:11601118-11600747 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 148, 140 |
| Conread position: | 44-426 |
| Cow position: | chr7:3179712-3180089 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 32, 26 |
Show alignments to all cow chromosomes.