Cow genome map
| Conread name: | mAY1-MI-P-AY1-npy-f-02-0-UI.s1 |
| Conread position: | 1-370 |
| Cow position: | chr1:31363669-31363285 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 52, 89 |
| Conread position: | 1-371 |
| Cow position: | chr1:20831281-20831667 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-371 |
| Cow position: | chr1:82478416-82478798 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 52, 159 |
| Conread position: | 1-371 |
| Cow position: | chr1:82655078-82655460 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1-371 |
| Cow position: | chr1:91901455-91901832 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 250 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 46, 157 |
| Conread position: | 1-378 |
| Cow position: | chr1:100028387-100028774 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 227 |
| Conread position: | 1-399 |
| Cow position: | chr1:66166673-66167086 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 220 |
| Conread position: | 2-306 |
| Cow position: | chr1:94662109-94662426 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 38, 142 |
| Conread position: | 2-319 |
| Cow position: | chr1:5300657-5300325 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-327 |
| Cow position: | chr1:85794401-85794740 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 51, 191 |
| Conread position: | 2-333 |
| Cow position: | chr1:18138035-18137695 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 38, 22 |
| Conread position: | 2-336 |
| Cow position: | chr1:72184434-72184085 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 131 |
| Conread position: | 2-337 |
| Cow position: | chr1:69920586-69920239 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 131 |
| Conread position: | 2-367 |
| Cow position: | chr1:33898697-33899077 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 2-368 |
| Cow position: | chr1:30532589-30532213 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 241 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 38, 131 |
| Conread position: | 2-368 |
| Cow position: | chr1:32565493-32565117 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 121, 61 |
| Conread position: | 2-368 |
| Cow position: | chr1:76619041-76618661 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 38, 131 |
| Conread position: | 2-369 |
| Cow position: | chr1:100509184-100509561 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 45, 131 |
| Conread position: | 2-370 |
| Cow position: | chr1:13252087-13251705 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 38, 131 |
| Conread position: | 2-370 |
| Cow position: | chr1:18195054-18195438 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 130 |
| Conread position: | 2-370 |
| Cow position: | chr1:25054715-25055095 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 51, 133 |
| Conread position: | 2-370 |
| Cow position: | chr1:26812642-26812260 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 131 |
| Conread position: | 2-370 |
| Cow position: | chr1:28713472-28713855 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 246 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-370 |
| Cow position: | chr1:28875520-28875904 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 2-370 |
| Cow position: | chr1:63603356-63602972 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 36, 131 |
| Conread position: | 2-370 |
| Cow position: | chr1:76740423-76740039 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 38, 131 |
| Conread position: | 2-370 |
| Cow position: | chr1:79454537-79454154 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 38, 132 |
| Conread position: | 2-370 |
| Cow position: | chr1:82921720-82921338 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 51, 209 |
| Conread position: | 2-370 |
| Cow position: | chr1:88675912-88676296 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 2-370 |
| Cow position: | chr1:90912258-90912642 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 38, 131 |
| Conread position: | 2-370 |
| Cow position: | chr1:93856949-93857334 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 36, 131 |
| Conread position: | 2-371 |
| Cow position: | chr1:3383884-3383501 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 82 |
| Conread position: | 2-371 |
| Cow position: | chr1:6197864-6197480 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 38, 131 |
| Conread position: | 2-371 |
| Cow position: | chr1:7826401-7826786 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-371 |
| Cow position: | chr1:8471731-8471346 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 2-371 |
| Cow position: | chr1:9260933-9261318 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 2-371 |
| Cow position: | chr1:9525922-9525533 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-371 |
| Cow position: | chr1:11290177-11289792 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-371 |
| Cow position: | chr1:17010262-17009877 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 2-371 |
| Cow position: | chr1:21089878-21090264 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 245 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-371 |
| Cow position: | chr1:26515943-26515564 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 45, 100 |
| Conread position: | 2-371 |
| Cow position: | chr1:30693511-30693887 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 36, 195 |
| Conread position: | 2-371 |
| Cow position: | chr1:30716254-30715869 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-371 |
| Cow position: | chr1:35599372-35598991 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 45, 120 |
| Conread position: | 2-371 |
| Cow position: | chr1:38477744-38478118 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 13, 132 |
| Conread position: | 2-371 |
| Cow position: | chr1:39546210-39546596 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 2-371 |
| Cow position: | chr1:40577365-40577752 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-371 |
| Cow position: | chr1:55274607-55274224 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 255 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 47, 232 |
| Conread position: | 2-371 |
| Cow position: | chr1:56620668-56621053 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-371 |
| Cow position: | chr1:57363895-57363516 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 2-371 |
| Cow position: | chr1:57422383-57421998 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 2-371 |
| Cow position: | chr1:58339359-58339743 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 38, 131 |
| Conread position: | 2-371 |
| Cow position: | chr1:59206640-59206255 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2-371 |
| Cow position: | chr1:59484427-59484050 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 38, 127 |
| Conread position: | 2-371 |
| Cow position: | chr1:61343280-61342898 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 247 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 38, 131 |
| Conread position: | 2-371 |
| Cow position: | chr1:67832706-67832328 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 120 |
| Conread position: | 2-371 |
| Cow position: | chr1:70069092-70069478 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-371 |
| Cow position: | chr1:71560314-71559931 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 47, 365 |
| Conread position: | 2-371 |
| Cow position: | chr1:72113438-72113813 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 38, 103 |
| Conread position: | 2-371 |
| Cow position: | chr1:73434897-73434512 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 255 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 38, 210 |
| Conread position: | 2-371 |
| Cow position: | chr1:77747174-77747559 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-371 |
| Cow position: | chr1:79634123-79633739 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 2-371 |
| Cow position: | chr1:82910392-82910017 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 53, 156 |
| Conread position: | 2-371 |
| Cow position: | chr1:86593871-86593491 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 248 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 38, 175 |
| Conread position: | 2-371 |
| Cow position: | chr1:90973382-90973767 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 2-371 |
| Cow position: | chr1:99915865-99916250 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 131 |
| Conread position: | 2-371 |
| Cow position: | chr1:99988934-99989319 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-371 |
| Cow position: | chr1:100708506-100708885 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 121 |
| Conread position: | 2-371 |
| Cow position: | chr1:102551435-102551822 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 250 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 51, 132 |
| Conread position: | 2-377 |
| Cow position: | chr1:33714519-33714910 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 22, 135 |
| Conread position: | 2-395 |
| Cow position: | chr1:40510817-40510421 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 51 |
| Conread position: | 2-428 |
| Cow position: | chr1:86545708-86545273 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 283 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 38, 387 |
| Conread position: | 2-436 |
| Cow position: | chr1:45004676-45005122 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 282 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 38, 191 |
| Conread position: | 3-365 |
| Cow position: | chr1:69212675-69212346 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 87, 49 |
| Conread position: | 3-371 |
| Cow position: | chr1:26575182-26574801 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 264 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 68, 266 |
| Conread position: | 5-223 |
| Cow position: | chr1:18272882-18272660 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 50, 194 |
| Conread position: | 5-337 |
| Cow position: | chr1:76872316-76872663 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 231 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 42, 235 |
| Conread position: | 5-369 |
| Cow position: | chr1:21995578-21995199 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 35, 128 |
| Conread position: | 5-369 |
| Cow position: | chr1:33853717-33854093 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 35, 140 |
| Conread position: | 5-369 |
| Cow position: | chr1:40057549-40057927 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 48, 92 |
| Conread position: | 5-369 |
| Cow position: | chr1:56141922-56141542 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 35, 128 |
| Conread position: | 5-370 |
| Cow position: | chr1:57570271-57570650 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 43, 127 |
| Conread position: | 5-371 |
| Cow position: | chr1:54932358-54932740 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 5-373 |
| Cow position: | chr1:21114967-21114589 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 239 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 52, 75 |
| Conread position: | 5-395 |
| Cow position: | chr1:73064903-73064500 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 35, 128 |
| Conread position: | 6-371 |
| Cow position: | chr1:13438031-13437650 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 6-395 |
| Cow position: | chr1:22631578-22631178 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 260 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 34, 127 |
| Conread position: | 6-428 |
| Cow position: | chr1:56725597-56726032 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 34, 386 |
| Conread position: | 7-337 |
| Cow position: | chr1:56274193-56273848 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 7-394 |
| Cow position: | chr1:94807166-94806756 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 268 |
| Conread position: | 9-245 |
| Cow position: | chr1:71451505-71451743 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 158 |
| Conread position: | 9-369 |
| Cow position: | chr1:85536636-85536273 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 44 |
| Conread position: | 9-371 |
| Cow position: | chr1:54405242-54404884 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 54 |
| Conread position: | 9-371 |
| Cow position: | chr1:84225255-84225617 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 40, 15 |
| Conread position: | 12-229 |
| Cow position: | chr1:42421195-42421411 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 58 |
| Conread position: | 15-366 |
| Cow position: | chr1:86452228-86451870 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 34, 166 |
| Conread position: | 32-371 |
| Cow position: | chr1:31530755-31531098 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 59, 17 |
| Conread position: | 56-330 |
| Cow position: | chr1:63048468-63048184 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 56-371 |
| Cow position: | chr1:22241219-22241540 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 66, 155 |
| Conread position: | 56-371 |
| Cow position: | chr1:86704637-86704963 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 67, 132 |
| Conread position: | 56-371 |
| Cow position: | chr1:100593430-100593104 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 212 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 64, 72 |
| Conread position: | 56-406 |
| Cow position: | chr1:16081136-16081490 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 17, 22 |
| Conread position: | 56-429 |
| Cow position: | chr1:33548912-33548536 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 64, 72 |
| Conread position: | 58-371 |
| Cow position: | chr1:30300785-30301113 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 61, 303 |
| Conread position: | 60-338 |
| Cow position: | chr1:79913448-79913724 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 108, 70 |
| Conread position: | 69-368 |
| Cow position: | chr1:56654118-56653822 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 225 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 62, 195 |
| Conread position: | 71-395 |
| Cow position: | chr1:69405660-69405992 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 49, 57 |
| Conread position: | 74-340 |
| Cow position: | chr1:29923093-29923365 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 45, 115 |
| Conread position: | 75-371 |
| Cow position: | chr1:15437412-15437105 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 75-371 |
| Cow position: | chr1:40682218-40681917 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 80 |
| Conread position: | 83-371 |
| Cow position: | chr1:49952525-49952231 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 45 |
| Conread position: | 84-369 |
| Cow position: | chr1:3375679-3375966 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 39, 92 |
| Conread position: | 84-371 |
| Cow position: | chr1:21378041-21377745 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 42, 171 |
| Conread position: | 84-378 |
| Cow position: | chr1:39142639-39142341 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 71, 44 |
| Conread position: | 84-428 |
| Cow position: | chr1:60341566-60341914 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 39, 300 |
| Conread position: | 86-369 |
| Cow position: | chr1:43568974-43568686 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 37, 124 |
| Conread position: | 89-370 |
| Cow position: | chr1:16118023-16118307 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 34, 215 |
| Conread position: | 97-367 |
| Cow position: | chr1:1102883-1102605 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 35, 147 |
| Conread position: | 104-400 |
| Cow position: | chr1:34315633-34315328 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 27, 87 |
| Conread position: | 110-378 |
| Cow position: | chr1:93250000-93250269 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 24, 73 |
| Conread position: | 121-252 |
| Cow position: | chr1:32920554-32920685 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 75 |
| Conread position: | 121-369 |
| Cow position: | chr1:7635856-7636112 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 196 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 66, 43 |
| Conread position: | 124-394 |
| Cow position: | chr1:85712816-85713093 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 48, 243 |
| Conread position: | 136-371 |
| Cow position: | chr1:69769381-69769626 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 139-371 |
| Cow position: | chr1:7164663-7164903 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 26, 8 |
| Conread position: | 149-371 |
| Cow position: | chr1:20392992-20393223 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 18, 25 |
| Conread position: | 149-378 |
| Cow position: | chr1:102320405-102320173 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 23, 15 |
| Conread position: | 161-406 |
| Cow position: | chr1:88306336-88306094 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 187, 33 |
| Conread position: | 188-358 |
| Cow position: | chr1:70390090-70390266 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 94, 7 |
| Conread position: | 190-370 |
| Cow position: | chr1:19184770-19184960 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 39, 26 |
| Conread position: | 191-393 |
| Cow position: | chr1:13272035-13271836 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 93, 55 |
| Conread position: | 195-368 |
| Cow position: | chr1:20044664-20044841 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 98, 63 |
| Conread position: | 203-394 |
| Cow position: | chr1:53558191-53557995 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 210-371 |
| Cow position: | chr1:17155339-17155176 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 83, 25 |
| Conread position: | 235-371 |
| Cow position: | chr1:18272506-18272363 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 236-369 |
| Cow position: | chr1:56449929-56450060 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 112, 62 |
Show alignments to all cow chromosomes.