Cow genome map

Conread name: mAY1-MI-P-AY1-npy-f-02-0-UI.s1

Conread position: 1-370
Cow position: chr10:1663509-1663130 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 246
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 46, 173

Conread position: 1-370
Cow position: chr10:25004372-25004751 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 250
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 39, 59

Conread position: 1-371
Cow position: chr10:41569557-41569943 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 248
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 2-311
Cow position: chr10:29107325-29107010 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 38, 131

Conread position: 2-324
Cow position: chr10:7896028-7895691 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 221
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 2-337
Cow position: chr10:29629816-29629466 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 229
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 131

Conread position: 2-337
Cow position: chr10:39210217-39210563 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 225
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 51, 158

Conread position: 2-337
Cow position: chr10:50017905-50017560 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 220
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 37, 128

Conread position: 2-339
Cow position: chr10:50314089-50314439 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 220
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 56, 141

Conread position: 2-350
Cow position: chr10:39038604-39038232 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 245
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 38, 81

Conread position: 2-357
Cow position: chr10:2118570-2118204 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 205
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 131

Conread position: 2-369
Cow position: chr10:19142155-19141773 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 251
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 135

Conread position: 2-370
Cow position: chr10:7279645-7279265 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 258
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 45, 131

Conread position: 2-370
Cow position: chr10:21489399-21489776 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 242
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 246

Conread position: 2-370
Cow position: chr10:28031472-28031101 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 252
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 131

Conread position: 2-370
Cow position: chr10:35824887-35824507 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 252
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 38, 190

Conread position: 2-370
Cow position: chr10:51557853-51558237 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 254
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 38, 131

Conread position: 2-370
Cow position: chr10:57987246-57986857 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 258
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 131

Conread position: 2-371
Cow position: chr10:1379955-1380338 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 246
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 131

Conread position: 2-371
Cow position: chr10:8292582-8292968 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 252
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 131

Conread position: 2-371
Cow position: chr10:8681077-8681462 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 248
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 2-371
Cow position: chr10:10584588-10584968 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 249
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 66, 21

Conread position: 2-371
Cow position: chr10:14333388-14333003 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 252
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 36, 131

Conread position: 2-371
Cow position: chr10:19842126-19842508 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 252
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 51, 151

Conread position: 2-371
Cow position: chr10:21738272-21737889 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 248
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 215

Conread position: 2-371
Cow position: chr10:22103944-22104318 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 253
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 38, 113

Conread position: 2-371
Cow position: chr10:23848419-23848804 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 245
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 2-371
Cow position: chr10:25340610-25340982 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 234
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 111

Conread position: 2-371
Cow position: chr10:25650964-25650580 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 242
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 189

Conread position: 2-371
Cow position: chr10:30719146-30719531 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 256
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 141

Conread position: 2-371
Cow position: chr10:32008531-32008915 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 252
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 51, 190

Conread position: 2-371
Cow position: chr10:32364396-32364781 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 244
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 2-371
Cow position: chr10:32703219-32703601 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 250
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 131

Conread position: 2-371
Cow position: chr10:33868730-33868346 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 247
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 45, 190

Conread position: 2-371
Cow position: chr10:37772346-37772724 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 250
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 45, 195

Conread position: 2-371
Cow position: chr10:41159875-41160255 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 245
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 77, 61

Conread position: 2-371
Cow position: chr10:44706254-44705868 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 247
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 2-371
Cow position: chr10:48374990-48374607 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 256
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 50, 189

Conread position: 2-371
Cow position: chr10:51950643-51950258 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 248
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 2-371
Cow position: chr10:57554882-57554497 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 246
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 2-394
Cow position: chr10:10718801-10718413 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 264
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 56, 111

Conread position: 2-395
Cow position: chr10:21426846-21426444 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 259
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 141

Conread position: 2-395
Cow position: chr10:42744053-42744455 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 257
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 149

Conread position: 2-428
Cow position: chr10:26293032-26292598 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 281
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 110

Conread position: 2-428
Cow position: chr10:47909076-47909506 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 283
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 51, 158

Conread position: 3-340
Cow position: chr10:39264128-39264491 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 5-252
Cow position: chr10:47916922-47917179 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 191
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 40, 246

Conread position: 5-274
Cow position: chr10:2727244-2727525 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 22

Conread position: 5-369
Cow position: chr10:21450742-21450365 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 241
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 35, 149

Conread position: 5-369
Cow position: chr10:49430103-49430478 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 246
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 199

Conread position: 5-370
Cow position: chr10:61133600-61133955 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 243
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 33, 181

Conread position: 5-370
Cow position: chr10:62406314-62405933 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 249
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 35, 128

Conread position: 5-395
Cow position: chr10:19513688-19514091 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 266
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 35, 128

Conread position: 6-371
Cow position: chr10:14806394-14806773 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 241
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 6-371
Cow position: chr10:25564095-25563718 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 244
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 32, 56

Conread position: 7-337
Cow position: chr10:27123089-27122749 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 224
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 128

Conread position: 9-371
Cow position: chr10:25264017-25264364 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 259
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 116, 45

Conread position: 10-344
Cow position: chr10:56449023-56449336 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 243
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 88, 43

Conread position: 10-368
Cow position: chr10:25919357-25918991 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 238
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 58, 49

Conread position: 10-371
Cow position: chr10:16928620-16928996 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 247
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 30, 95

Conread position: 11-348
Cow position: chr10:50506474-50506126 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 247
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 30, 95

Conread position: 11-427
Cow position: chr10:33221373-33220933 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 304
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 39, 101

Conread position: 17-353
Cow position: chr10:49502588-49502929 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 217
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 37

Conread position: 56-356
Cow position: chr10:2148177-2147874 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 197
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 104

Conread position: 56-371
Cow position: chr10:25633325-25632999 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 208
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 56-371
Cow position: chr10:30688512-30688837 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 212
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 67, 154

Conread position: 57-331
Cow position: chr10:53243179-53243465 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 59, 98

Conread position: 57-365
Cow position: chr10:49933167-49932839 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 237
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 57, 156

Conread position: 58-368
Cow position: chr10:41708572-41708273 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 217
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 66, 121

Conread position: 58-368
Cow position: chr10:51764859-51764538 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 50, 120

Conread position: 70-371
Cow position: chr10:68826203-68825892 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 42

Conread position: 74-314
Cow position: chr10:16320203-16320452 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 186
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 43, 96

Conread position: 82-365
Cow position: chr10:65242911-65242626 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 191
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 42, 199

Conread position: 89-370
Cow position: chr10:23411593-23411883 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 194
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 31, 13

Conread position: 89-371
Cow position: chr10:24100550-24100259 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 194
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 34, 95

Conread position: 89-371
Cow position: chr10:45647408-45647695 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 192
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 68

Conread position: 99-378
Cow position: chr10:57371198-57370908 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 24, 0

Conread position: 102-370
Cow position: chr10:7831285-7831550 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 86, 7

Conread position: 119-369
Cow position: chr10:3896185-3895943 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 7

Conread position: 121-369
Cow position: chr10:53830035-53830289 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 75, 84

Conread position: 150-394
Cow position: chr10:7309979-7310227 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 14, 86

Conread position: 178-371
Cow position: chr10:63848991-63849181 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 18

Conread position: 191-350
Cow position: chr10:68528906-68529070 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 204-371
Cow position: chr10:922609-922443 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 138
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 6, 143

Conread position: 215-370
Cow position: chr10:37308810-37308974 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 0

Show alignments to all cow chromosomes.