Cow genome map
Conread name: | mAY1-MI-P-AY1-npy-f-02-0-UI.s1 |
Conread position: | 1-425 |
Cow position: | chr12:32655929-32656363 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 293 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 52, 132 |
Conread position: | 2-333 |
Cow position: | chr12:251460-251118 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 217 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 38, 127 |
Conread position: | 2-336 |
Cow position: | chr12:1404648-1404996 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 229 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 2-336 |
Cow position: | chr12:6078728-6078387 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 231 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 47, 125 |
Conread position: | 2-337 |
Cow position: | chr12:21252202-21251854 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 229 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 38, 151 |
Conread position: | 2-337 |
Cow position: | chr12:33926144-33925794 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 226 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 2-370 |
Cow position: | chr12:21944494-21944876 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 246 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 36, 64 |
Conread position: | 2-370 |
Cow position: | chr12:27853572-27853187 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 245 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 2-371 |
Cow position: | chr12:3717895-3717510 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 244 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 2-371 |
Cow position: | chr12:11100623-11101008 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 250 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 38, 133 |
Conread position: | 2-371 |
Cow position: | chr12:17717676-17718061 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 245 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 2-371 |
Cow position: | chr12:21430338-21430723 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 247 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 38, 290 |
Conread position: | 2-371 |
Cow position: | chr12:22571222-22571603 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 243 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 51, 207 |
Conread position: | 2-371 |
Cow position: | chr12:22747589-22747974 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 248 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 38, 192 |
Conread position: | 2-371 |
Cow position: | chr12:24993592-24993207 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 247 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 2-371 |
Cow position: | chr12:25266958-25266573 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 246 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 2-371 |
Cow position: | chr12:34964923-34964538 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 245 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 2-371 |
Cow position: | chr12:35548753-35548366 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 243 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 2-371 |
Cow position: | chr12:37561384-37561768 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 246 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 2-371 |
Cow position: | chr12:38892737-38893122 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 248 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 2-371 |
Cow position: | chr12:42605801-42605416 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 248 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 3-362 |
Cow position: | chr12:8555232-8555612 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 263 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 47, 250 |
Conread position: | 5-371 |
Cow position: | chr12:18585054-18585436 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 242 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 5-371 |
Cow position: | chr12:21211053-21211435 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 254 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 35, 284 |
Conread position: | 6-371 |
Cow position: | chr12:12755776-12755395 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 249 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 34, 127 |
Conread position: | 9-350 |
Cow position: | chr12:26922294-26922644 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 236 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 40, 128 |
Conread position: | 9-369 |
Cow position: | chr12:11512122-11512496 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 249 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 29, 118 |
Conread position: | 9-369 |
Cow position: | chr12:27515049-27515417 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 102 |
Conread position: | 26-370 |
Cow position: | chr12:22203272-22202909 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 237 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 14, 107 |
Conread position: | 31-371 |
Cow position: | chr12:10358102-10358458 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 229 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 8, 41 |
Conread position: | 54-378 |
Cow position: | chr12:7862389-7862066 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 223 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 174, 17 |
Conread position: | 67-423 |
Cow position: | chr12:10944917-10945260 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 202, 35 |
Conread position: | 77-367 |
Cow position: | chr12:27355257-27354959 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 196 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 38, 178 |
Conread position: | 84-395 |
Cow position: | chr12:42231776-42232090 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 211 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 95, 16 |
Conread position: | 85-374 |
Cow position: | chr12:20846601-20846901 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 196 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 32, 43 |
Conread position: | 89-350 |
Cow position: | chr12:25097795-25097526 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 177 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 31, 39 |
Conread position: | 89-370 |
Cow position: | chr12:20995290-20994998 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 193 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 89-371 |
Cow position: | chr12:31330437-31330146 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 191 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 34, 18 |
Conread position: | 91-371 |
Cow position: | chr12:27080767-27080491 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 209 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 28, 112 |
Conread position: | 95-394 |
Cow position: | chr12:23943415-23943714 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 13 |
Conread position: | 133-329 |
Cow position: | chr12:20571577-20571376 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 148 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 34, 86 |
Conread position: | 137-371 |
Cow position: | chr12:45144572-45144816 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 163 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 146-371 |
Cow position: | chr12:8866675-8866457 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 156 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 121, 36 |
Conread position: | 147-371 |
Cow position: | chr12:16802516-16802282 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 157 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 195-394 |
Cow position: | chr12:21291929-21292132 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 156 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 15, 68 |
Conread position: | 198-370 |
Cow position: | chr12:23026315-23026494 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 136 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 56, 0 |
Show alignments to all cow chromosomes.