Cow genome map

Conread name: mAY1-MI-P-AY1-npy-f-02-0-UI.s1

Conread position: 1-425
Cow position: chr12:32655929-32656363 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 293
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 52, 132

Conread position: 2-333
Cow position: chr12:251460-251118 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 217
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 38, 127

Conread position: 2-336
Cow position: chr12:1404648-1404996 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 229
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 51, 0

Conread position: 2-336
Cow position: chr12:6078728-6078387 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 231
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 125

Conread position: 2-337
Cow position: chr12:21252202-21251854 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 229
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 38, 151

Conread position: 2-337
Cow position: chr12:33926144-33925794 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 226
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 2-370
Cow position: chr12:21944494-21944876 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 246
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 64

Conread position: 2-370
Cow position: chr12:27853572-27853187 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 245
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 2-371
Cow position: chr12:3717895-3717510 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 244
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 2-371
Cow position: chr12:11100623-11101008 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 250
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 133

Conread position: 2-371
Cow position: chr12:17717676-17718061 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 245
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 2-371
Cow position: chr12:21430338-21430723 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 247
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 38, 290

Conread position: 2-371
Cow position: chr12:22571222-22571603 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 243
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 207

Conread position: 2-371
Cow position: chr12:22747589-22747974 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 248
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 38, 192

Conread position: 2-371
Cow position: chr12:24993592-24993207 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 247
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 2-371
Cow position: chr12:25266958-25266573 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 246
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 2-371
Cow position: chr12:34964923-34964538 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 245
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 2-371
Cow position: chr12:35548753-35548366 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 243
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 2-371
Cow position: chr12:37561384-37561768 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 246
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 2-371
Cow position: chr12:38892737-38893122 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 248
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 51, 0

Conread position: 2-371
Cow position: chr12:42605801-42605416 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 248
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 3-362
Cow position: chr12:8555232-8555612 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 263
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 47, 250

Conread position: 5-371
Cow position: chr12:18585054-18585436 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 242
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 5-371
Cow position: chr12:21211053-21211435 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 254
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 284

Conread position: 6-371
Cow position: chr12:12755776-12755395 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 249
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 127

Conread position: 9-350
Cow position: chr12:26922294-26922644 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 236
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 40, 128

Conread position: 9-369
Cow position: chr12:11512122-11512496 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 249
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 29, 118

Conread position: 9-369
Cow position: chr12:27515049-27515417 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 102

Conread position: 26-370
Cow position: chr12:22203272-22202909 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 237
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 14, 107

Conread position: 31-371
Cow position: chr12:10358102-10358458 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 229
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 41

Conread position: 54-378
Cow position: chr12:7862389-7862066 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 223
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 174, 17

Conread position: 67-423
Cow position: chr12:10944917-10945260 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 35

Conread position: 77-367
Cow position: chr12:27355257-27354959 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 196
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 178

Conread position: 84-395
Cow position: chr12:42231776-42232090 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 211
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 95, 16

Conread position: 85-374
Cow position: chr12:20846601-20846901 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 196
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 43

Conread position: 89-350
Cow position: chr12:25097795-25097526 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 177
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 31, 39

Conread position: 89-370
Cow position: chr12:20995290-20994998 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 193
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 89-371
Cow position: chr12:31330437-31330146 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 191
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 18

Conread position: 91-371
Cow position: chr12:27080767-27080491 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 209
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 28, 112

Conread position: 95-394
Cow position: chr12:23943415-23943714 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 13

Conread position: 133-329
Cow position: chr12:20571577-20571376 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 34, 86

Conread position: 137-371
Cow position: chr12:45144572-45144816 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 163
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 146-371
Cow position: chr12:8866675-8866457 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 121, 36

Conread position: 147-371
Cow position: chr12:16802516-16802282 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 157
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 195-394
Cow position: chr12:21291929-21292132 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 15, 68

Conread position: 198-370
Cow position: chr12:23026315-23026494 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 56, 0

Show alignments to all cow chromosomes.