Cow genome map
Conread name: | mAY1-MI-P-AY1-npy-f-02-0-UI.s1 |
Conread position: | 1-337 |
Cow position: | chr17:4062589-4062941 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 224 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 1-337 |
Cow position: | chr17:15141080-15140735 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 220 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 52, 128 |
Conread position: | 1-366 |
Cow position: | chr17:3606454-3606099 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 250 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 37, 250 |
Conread position: | 1-370 |
Cow position: | chr17:18100824-18100439 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 252 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 39, 132 |
Conread position: | 1-371 |
Cow position: | chr17:11785149-11785523 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 242 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 122, 35 |
Conread position: | 2-280 |
Cow position: | chr17:24784427-24784713 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 185 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 2-330 |
Cow position: | chr17:40563-40906 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 219 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 2-330 |
Cow position: | chr17:16903143-16903482 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 226 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 38, 131 |
Conread position: | 2-369 |
Cow position: | chr17:2264446-2264829 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 250 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 2-370 |
Cow position: | chr17:13930152-13930534 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 246 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 38, 131 |
Conread position: | 2-370 |
Cow position: | chr17:14242085-14242469 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 255 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 38, 131 |
Conread position: | 2-370 |
Cow position: | chr17:16855837-16855457 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 252 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 38, 141 |
Conread position: | 2-370 |
Cow position: | chr17:25738558-25738941 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 253 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 38, 210 |
Conread position: | 2-371 |
Cow position: | chr17:3742421-3742806 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 244 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 2-371 |
Cow position: | chr17:6070795-6071175 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 247 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 45, 131 |
Conread position: | 2-371 |
Cow position: | chr17:13418661-13419041 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 247 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 51, 235 |
Conread position: | 2-371 |
Cow position: | chr17:14214776-14214392 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 243 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 51, 140 |
Conread position: | 2-371 |
Cow position: | chr17:15438056-15438442 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 251 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 2-371 |
Cow position: | chr17:15709732-15709356 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 231 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 51, 276 |
Conread position: | 2-371 |
Cow position: | chr17:20098053-20097676 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 248 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 38, 60 |
Conread position: | 2-371 |
Cow position: | chr17:20233008-20233392 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 252 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 37, 148 |
Conread position: | 2-371 |
Cow position: | chr17:22107385-22107000 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 252 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 38, 131 |
Conread position: | 2-371 |
Cow position: | chr17:27792522-27792137 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 249 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 2-371 |
Cow position: | chr17:29825704-29825324 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 248 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 38, 160 |
Conread position: | 2-395 |
Cow position: | chr17:15327544-15327939 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 262 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 38, 131 |
Conread position: | 2-398 |
Cow position: | chr17:17127228-17127637 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 258 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 38, 390 |
Conread position: | 2-428 |
Cow position: | chr17:5307478-5307043 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 284 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 51, 391 |
Conread position: | 2-478 |
Cow position: | chr17:16119970-16119481 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 304 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 37, 128 |
Conread position: | 5-370 |
Cow position: | chr17:732231-731848 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 247 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 5-371 |
Cow position: | chr17:8210915-8211298 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 244 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 5-371 |
Cow position: | chr17:18124675-18124294 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 239 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 5-394 |
Cow position: | chr17:18593494-18593896 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 113 |
Conread position: | 6-337 |
Cow position: | chr17:147195-147539 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 218 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 6-369 |
Cow position: | chr17:31950261-31949889 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 252 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 43, 8 |
Conread position: | 6-371 |
Cow position: | chr17:15808236-15808617 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 248 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 6-371 |
Cow position: | chr17:23322163-23321785 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 247 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 47, 123 |
Conread position: | 10-237 |
Cow position: | chr17:19806675-19806442 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 161 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 10-371 |
Cow position: | chr17:24027723-24027352 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 239 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 30, 69 |
Conread position: | 12-371 |
Cow position: | chr17:15852991-15853366 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 242 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 28, 123 |
Conread position: | 57-268 |
Cow position: | chr17:20572053-20572272 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 158 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 46, 94 |
Conread position: | 75-337 |
Cow position: | chr17:2176320-2176587 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 182 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 48, 117 |
Conread position: | 75-371 |
Cow position: | chr17:4297250-4297547 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 197 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 70, 51 |
Conread position: | 84-371 |
Cow position: | chr17:24291984-24292274 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 196 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 36, 44 |
Conread position: | 89-337 |
Cow position: | chr17:14030495-14030237 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 176 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 34, 56 |
Conread position: | 89-371 |
Cow position: | chr17:43990830-43991122 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 193 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 91-371 |
Cow position: | chr17:3314453-3314741 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 191 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 29, 39 |
Conread position: | 102-370 |
Cow position: | chr17:8222053-8222331 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 192 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 18, 26 |
Conread position: | 102-370 |
Cow position: | chr17:28025715-28025436 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 184 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 21, 218 |
Conread position: | 121-371 |
Cow position: | chr17:16050181-16049940 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 183 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 167, 12 |
Conread position: | 122-371 |
Cow position: | chr17:4481494-4481246 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 166 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 43, 161 |
Conread position: | 155-394 |
Cow position: | chr17:24307939-24308188 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 178 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 138, 75 |
Conread position: | 172-371 |
Cow position: | chr17:1536981-1536781 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 160 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 106, 149 |
Conread position: | 173-368 |
Cow position: | chr17:23280553-23280352 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 149 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 173-394 |
Cow position: | chr17:16668368-16668143 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 166 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 5, 24 |
Conread position: | 190-370 |
Cow position: | chr17:15017081-15017253 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 133 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 149, 86 |
Conread position: | 198-336 |
Cow position: | chr17:14908672-14908526 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 112 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 392-535 |
Cow position: | chr17:18384031-18383879 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 116 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 33, 145 |
Show alignments to all cow chromosomes.