Cow genome map
| Conread name: | mAY1-MI-P-AY1-npy-f-02-0-UI.s1 |
| Conread position: | 1-248 |
| Cow position: | chr19:36149144-36149399 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 130 |
| Conread position: | 1-337 |
| Cow position: | chr19:4388069-4388414 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 39, 67 |
| Conread position: | 2-311 |
| Cow position: | chr19:748779-748462 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 38, 50 |
| Conread position: | 2-336 |
| Cow position: | chr19:257796-258141 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 21 |
| Conread position: | 2-370 |
| Cow position: | chr19:5731992-5732369 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 248 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 37, 25 |
| Conread position: | 2-370 |
| Cow position: | chr19:12775606-12775990 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 38, 131 |
| Conread position: | 2-370 |
| Cow position: | chr19:33944052-33944432 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 38, 131 |
| Conread position: | 2-370 |
| Cow position: | chr19:40834781-40834397 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 38, 190 |
| Conread position: | 2-370 |
| Cow position: | chr19:40850004-40849620 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 250 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 36, 262 |
| Conread position: | 2-371 |
| Cow position: | chr19:1584949-1585334 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 250 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 25, 149 |
| Conread position: | 2-371 |
| Cow position: | chr19:7344516-7344900 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 246 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 38, 151 |
| Conread position: | 2-371 |
| Cow position: | chr19:7481454-7481069 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 2-371 |
| Cow position: | chr19:7490581-7490966 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 38, 131 |
| Conread position: | 2-371 |
| Cow position: | chr19:15445382-15444997 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 247 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-371 |
| Cow position: | chr19:20610815-20611200 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-371 |
| Cow position: | chr19:52149063-52148682 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 246 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 38, 158 |
| Conread position: | 2-395 |
| Cow position: | chr19:33875898-33876304 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 36, 131 |
| Conread position: | 2-399 |
| Cow position: | chr19:5766861-5767251 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 278 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 56, 31 |
| Conread position: | 2-412 |
| Cow position: | chr19:9116233-9115822 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 5-281 |
| Cow position: | chr19:12701274-12701544 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 49 |
| Conread position: | 5-292 |
| Cow position: | chr19:5901057-5901348 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 35, 104 |
| Conread position: | 5-370 |
| Cow position: | chr19:13133464-13133098 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 61, 114 |
| Conread position: | 5-370 |
| Cow position: | chr19:39183053-39182673 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 35, 128 |
| Conread position: | 7-369 |
| Cow position: | chr19:40017085-40016722 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 33, 55 |
| Conread position: | 9-371 |
| Cow position: | chr19:475008-474630 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 10-371 |
| Cow position: | chr19:20107232-20107604 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 43, 315 |
| Conread position: | 11-372 |
| Cow position: | chr19:25765875-25766242 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 267 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 95, 33 |
| Conread position: | 27-372 |
| Cow position: | chr19:32719320-32719677 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 30-369 |
| Cow position: | chr19:30517316-30517667 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 10, 103 |
| Conread position: | 31-369 |
| Cow position: | chr19:326829-327161 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 15, 219 |
| Conread position: | 56-368 |
| Cow position: | chr19:40875-41197 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 56-370 |
| Cow position: | chr19:12553694-12553368 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 56-371 |
| Cow position: | chr19:22390916-22390590 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 77-346 |
| Cow position: | chr19:48333525-48333797 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 91, 51 |
| Conread position: | 84-395 |
| Cow position: | chr19:2270729-2270410 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 36, 44 |
| Conread position: | 89-294 |
| Cow position: | chr19:8575704-8575493 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 25 |
| Conread position: | 89-340 |
| Cow position: | chr19:39938975-39938723 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 34, 249 |
| Conread position: | 89-371 |
| Cow position: | chr19:890623-890330 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 31, 39 |
| Conread position: | 92-294 |
| Cow position: | chr19:35173862-35173658 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 33, 51 |
| Conread position: | 95-305 |
| Cow position: | chr19:44015643-44015851 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 99, 41 |
| Conread position: | 95-370 |
| Cow position: | chr19:13064007-13064291 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 28, 19 |
| Conread position: | 95-371 |
| Cow position: | chr19:3586561-3586279 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 29, 79 |
| Conread position: | 96-369 |
| Cow position: | chr19:44004887-44005166 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 27, 52 |
| Conread position: | 96-373 |
| Cow position: | chr19:39640352-39640635 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 27, 81 |
| Conread position: | 100-369 |
| Cow position: | chr19:1292934-1293214 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 130-371 |
| Cow position: | chr19:6439809-6440060 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 190-371 |
| Cow position: | chr19:38066848-38067035 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 88, 14 |
| Conread position: | 193-370 |
| Cow position: | chr19:27209709-27209531 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 93 |
Show alignments to all cow chromosomes.