Cow genome map

Conread name: mAY1-MI-P-AY1-npy-f-02-0-UI.s1

Conread position: 1-308
Cow position: chr20:32827017-32826705 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 227
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 40, 113

Conread position: 1-365
Cow position: chr20:4242505-4242880 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 36

Conread position: 1-369
Cow position: chr20:35160136-35159753 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 249
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 39, 152

Conread position: 2-303
Cow position: chr20:23801336-23801649 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 211
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 38, 81

Conread position: 2-317
Cow position: chr20:15294412-15294742 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 214
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 131

Conread position: 2-337
Cow position: chr20:752592-752942 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 228
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 51, 190

Conread position: 2-337
Cow position: chr20:27345513-27345175 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 228
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 73

Conread position: 2-337
Cow position: chr20:34459859-34459518 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 227
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 38, 102

Conread position: 2-350
Cow position: chr20:10922474-10922114 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 237
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 44, 180

Conread position: 2-367
Cow position: chr20:21719010-21719392 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 254
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 38, 213

Conread position: 2-369
Cow position: chr20:13765342-13765720 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 238
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 332

Conread position: 2-369
Cow position: chr20:16560097-16559714 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 246
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 2-370
Cow position: chr20:5537374-5537757 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 247
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 70, 130

Conread position: 2-370
Cow position: chr20:10495436-10495813 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 239
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 194

Conread position: 2-370
Cow position: chr20:12435952-12435567 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 251
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 131

Conread position: 2-370
Cow position: chr20:25846176-25845796 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 247
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 38, 131

Conread position: 2-370
Cow position: chr20:30688017-30688401 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 248
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 18, 0

Conread position: 2-371
Cow position: chr20:6136544-6136160 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 249
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 38, 189

Conread position: 2-371
Cow position: chr20:7598407-7598028 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 252
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 68, 61

Conread position: 2-371
Cow position: chr20:18355675-18356060 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 247
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 2-371
Cow position: chr20:23805432-23805048 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 256
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 80

Conread position: 2-371
Cow position: chr20:24541870-24542255 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 248
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 2-371
Cow position: chr20:28163489-28163874 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 253
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 38, 131

Conread position: 2-371
Cow position: chr20:30578336-30578717 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 243
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 51, 158

Conread position: 2-371
Cow position: chr20:39233675-39234060 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 245
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 51, 338

Conread position: 2-372
Cow position: chr20:28444903-28444518 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 248
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 287

Conread position: 2-395
Cow position: chr20:12568866-12568460 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 269
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 38, 117

Conread position: 3-330
Cow position: chr20:14851560-14851225 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 237
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 36, 150

Conread position: 3-371
Cow position: chr20:13073348-13073716 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 242
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 11

Conread position: 3-378
Cow position: chr20:36703841-36704223 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 110

Conread position: 5-371
Cow position: chr20:8971436-8971062 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 236
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 116, 51

Conread position: 5-371
Cow position: chr20:19440363-19440744 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 249
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 35, 102

Conread position: 5-371
Cow position: chr20:20440502-20440122 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 241
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 5-371
Cow position: chr20:24568822-24568440 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 246
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 6-371
Cow position: chr20:10867337-10866967 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 249
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 39, 231

Conread position: 7-370
Cow position: chr20:27875932-27876309 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 249
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 31, 126

Conread position: 8-370
Cow position: chr20:3809319-3808941 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 243
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 9-365
Cow position: chr20:21964482-21964114 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 246
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 30, 163

Conread position: 19-333
Cow position: chr20:14757794-14757466 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 215
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 174

Conread position: 30-423
Cow position: chr20:35127150-35127548 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 255
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 91, 9

Conread position: 56-337
Cow position: chr20:8200720-8201011 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 189
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 56-371
Cow position: chr20:7811325-7811005 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 214
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 99

Conread position: 94-370
Cow position: chr20:37927359-37927081 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 37, 23

Conread position: 102-370
Cow position: chr20:11411482-11411207 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 190
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 26

Conread position: 103-339
Cow position: chr20:7232376-7232619 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 162
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 21, 62

Conread position: 121-346
Cow position: chr20:42872347-42872567 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 176
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 9, 44

Conread position: 122-371
Cow position: chr20:5270594-5270340 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 170
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 43, 65

Conread position: 122-371
Cow position: chr20:14926072-14925813 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 173
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 122-371
Cow position: chr20:35108617-35108358 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 188-378
Cow position: chr20:42496539-42496347 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 59, 16

Conread position: 212-394
Cow position: chr20:23140888-23140703 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 56, 0

Show alignments to all cow chromosomes.