Cow genome map
Conread name: | mAY1-MI-P-AY1-npy-f-02-0-UI.s1 |
Conread position: | 1-308 |
Cow position: | chr20:32827017-32826705 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 227 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 40, 113 |
Conread position: | 1-365 |
Cow position: | chr20:4242505-4242880 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 36 |
Conread position: | 1-369 |
Cow position: | chr20:35160136-35159753 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 249 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 39, 152 |
Conread position: | 2-303 |
Cow position: | chr20:23801336-23801649 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 211 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 38, 81 |
Conread position: | 2-317 |
Cow position: | chr20:15294412-15294742 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 214 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 38, 131 |
Conread position: | 2-337 |
Cow position: | chr20:752592-752942 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 228 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 51, 190 |
Conread position: | 2-337 |
Cow position: | chr20:27345513-27345175 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 228 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 55, 73 |
Conread position: | 2-337 |
Cow position: | chr20:34459859-34459518 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 227 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 38, 102 |
Conread position: | 2-350 |
Cow position: | chr20:10922474-10922114 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 237 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 44, 180 |
Conread position: | 2-367 |
Cow position: | chr20:21719010-21719392 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 254 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 38, 213 |
Conread position: | 2-369 |
Cow position: | chr20:13765342-13765720 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 238 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 38, 332 |
Conread position: | 2-369 |
Cow position: | chr20:16560097-16559714 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 246 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 2-370 |
Cow position: | chr20:5537374-5537757 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 247 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 70, 130 |
Conread position: | 2-370 |
Cow position: | chr20:10495436-10495813 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 239 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 36, 194 |
Conread position: | 2-370 |
Cow position: | chr20:12435952-12435567 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 251 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 38, 131 |
Conread position: | 2-370 |
Cow position: | chr20:25846176-25845796 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 247 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 38, 131 |
Conread position: | 2-370 |
Cow position: | chr20:30688017-30688401 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 248 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 2-371 |
Cow position: | chr20:6136544-6136160 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 249 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 38, 189 |
Conread position: | 2-371 |
Cow position: | chr20:7598407-7598028 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 252 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 68, 61 |
Conread position: | 2-371 |
Cow position: | chr20:18355675-18356060 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 247 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 2-371 |
Cow position: | chr20:23805432-23805048 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 256 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 38, 80 |
Conread position: | 2-371 |
Cow position: | chr20:24541870-24542255 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 248 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 2-371 |
Cow position: | chr20:28163489-28163874 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 253 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 38, 131 |
Conread position: | 2-371 |
Cow position: | chr20:30578336-30578717 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 243 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 51, 158 |
Conread position: | 2-371 |
Cow position: | chr20:39233675-39234060 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 245 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 51, 338 |
Conread position: | 2-372 |
Cow position: | chr20:28444903-28444518 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 248 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 38, 287 |
Conread position: | 2-395 |
Cow position: | chr20:12568866-12568460 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 269 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 38, 117 |
Conread position: | 3-330 |
Cow position: | chr20:14851560-14851225 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 237 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 36, 150 |
Conread position: | 3-371 |
Cow position: | chr20:13073348-13073716 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 242 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 36, 11 |
Conread position: | 3-378 |
Cow position: | chr20:36703841-36704223 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 110 |
Conread position: | 5-371 |
Cow position: | chr20:8971436-8971062 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 236 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 116, 51 |
Conread position: | 5-371 |
Cow position: | chr20:19440363-19440744 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 249 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 35, 102 |
Conread position: | 5-371 |
Cow position: | chr20:20440502-20440122 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 241 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 5-371 |
Cow position: | chr20:24568822-24568440 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 246 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 6-371 |
Cow position: | chr20:10867337-10866967 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 249 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 39, 231 |
Conread position: | 7-370 |
Cow position: | chr20:27875932-27876309 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 249 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 31, 126 |
Conread position: | 8-370 |
Cow position: | chr20:3809319-3808941 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 243 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 9-365 |
Cow position: | chr20:21964482-21964114 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 246 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 30, 163 |
Conread position: | 19-333 |
Cow position: | chr20:14757794-14757466 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 215 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 21, 174 |
Conread position: | 30-423 |
Cow position: | chr20:35127150-35127548 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 255 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 91, 9 |
Conread position: | 56-337 |
Cow position: | chr20:8200720-8201011 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 189 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 56-371 |
Cow position: | chr20:7811325-7811005 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 214 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 55, 99 |
Conread position: | 94-370 |
Cow position: | chr20:37927359-37927081 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 196 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 37, 23 |
Conread position: | 102-370 |
Cow position: | chr20:11411482-11411207 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 190 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 18, 26 |
Conread position: | 103-339 |
Cow position: | chr20:7232376-7232619 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 162 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 21, 62 |
Conread position: | 121-346 |
Cow position: | chr20:42872347-42872567 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 176 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 9, 44 |
Conread position: | 122-371 |
Cow position: | chr20:5270594-5270340 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 170 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 43, 65 |
Conread position: | 122-371 |
Cow position: | chr20:14926072-14925813 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 173 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 122-371 |
Cow position: | chr20:35108617-35108358 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 170 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 188-378 |
Cow position: | chr20:42496539-42496347 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 142 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 59, 16 |
Conread position: | 212-394 |
Cow position: | chr20:23140888-23140703 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 132 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 56, 0 |
Show alignments to all cow chromosomes.