Cow genome map
| Conread name: | mAY1-MI-P-AY1-npy-f-02-0-UI.s1 |
| Conread position: | 1-371 |
| Cow position: | chr22:10907818-10907436 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 51, 191 |
| Conread position: | 1-371 |
| Cow position: | chr22:21193817-21193436 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 245 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 39, 128 |
| Conread position: | 2-280 |
| Cow position: | chr22:32205449-32205729 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 2-283 |
| Cow position: | chr22:42491962-42491686 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 47, 58 |
| Conread position: | 2-295 |
| Cow position: | chr22:15277762-15278059 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 51, 120 |
| Conread position: | 2-317 |
| Cow position: | chr22:44367094-44366773 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 38, 287 |
| Conread position: | 2-336 |
| Cow position: | chr22:37269480-37269829 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 2-337 |
| Cow position: | chr22:19141305-19140956 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 38, 92 |
| Conread position: | 2-337 |
| Cow position: | chr22:29854238-29854588 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 2-350 |
| Cow position: | chr22:1482797-1483159 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 45, 131 |
| Conread position: | 2-369 |
| Cow position: | chr22:539515-539899 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 38, 252 |
| Conread position: | 2-369 |
| Cow position: | chr22:31332490-31332107 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 248 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 38, 131 |
| Conread position: | 2-370 |
| Cow position: | chr22:10933839-10933462 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 38, 14 |
| Conread position: | 2-370 |
| Cow position: | chr22:15309574-15309198 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 38, 131 |
| Conread position: | 2-370 |
| Cow position: | chr22:17326098-17325716 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 254 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 38, 131 |
| Conread position: | 2-370 |
| Cow position: | chr22:28784502-28784886 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 38, 131 |
| Conread position: | 2-370 |
| Cow position: | chr22:31314925-31315309 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 37, 81 |
| Conread position: | 2-370 |
| Cow position: | chr22:34170725-34171108 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 253 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 38, 131 |
| Conread position: | 2-370 |
| Cow position: | chr22:36859165-36858771 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 38, 221 |
| Conread position: | 2-371 |
| Cow position: | chr22:558320-557935 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 38, 131 |
| Conread position: | 2-371 |
| Cow position: | chr22:980674-981057 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 2-371 |
| Cow position: | chr22:3275965-3275591 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 51, 73 |
| Conread position: | 2-371 |
| Cow position: | chr22:3434581-3434197 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 38, 131 |
| Conread position: | 2-371 |
| Cow position: | chr22:5931701-5931316 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 38, 129 |
| Conread position: | 2-371 |
| Cow position: | chr22:10578103-10577722 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 51, 158 |
| Conread position: | 2-371 |
| Cow position: | chr22:11609027-11609410 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 38, 176 |
| Conread position: | 2-371 |
| Cow position: | chr22:11802665-11802283 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 51, 238 |
| Conread position: | 2-371 |
| Cow position: | chr22:18029659-18030041 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 51, 219 |
| Conread position: | 2-371 |
| Cow position: | chr22:20238451-20238066 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 2-371 |
| Cow position: | chr22:27307583-27307198 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 251 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 38, 191 |
| Conread position: | 2-371 |
| Cow position: | chr22:30676343-30675961 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 38, 158 |
| Conread position: | 2-371 |
| Cow position: | chr22:35669281-35668901 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 38, 290 |
| Conread position: | 2-371 |
| Cow position: | chr22:37537090-37536711 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 254 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 51, 318 |
| Conread position: | 2-371 |
| Cow position: | chr22:41847167-41846782 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 2-371 |
| Cow position: | chr22:43235227-43235603 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 51, 78 |
| Conread position: | 2-426 |
| Cow position: | chr22:42993560-42993991 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 38, 130 |
| Conread position: | 2-428 |
| Cow position: | chr22:45280325-45280765 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 392 |
| Conread position: | 5-322 |
| Cow position: | chr22:23858084-23857755 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 46, 77 |
| Conread position: | 5-370 |
| Cow position: | chr22:18604410-18604040 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 35, 53 |
| Conread position: | 5-371 |
| Cow position: | chr22:21591811-21592189 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 33, 320 |
| Conread position: | 6-368 |
| Cow position: | chr22:46579335-46578964 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 34, 148 |
| Conread position: | 6-371 |
| Cow position: | chr22:696315-696696 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 6-371 |
| Cow position: | chr22:44100952-44100573 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 10-367 |
| Cow position: | chr22:16439998-16440365 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 47, 106 |
| Conread position: | 56-371 |
| Cow position: | chr22:10601313-10601639 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 75-371 |
| Cow position: | chr22:8487414-8487107 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 84-368 |
| Cow position: | chr22:17812157-17811862 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 100-370 |
| Cow position: | chr22:8338909-8339185 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 23, 45 |
| Conread position: | 100-394 |
| Cow position: | chr22:13653054-13653342 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 22, 13 |
| Conread position: | 107-370 |
| Cow position: | chr22:33952459-33952185 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 13, 21 |
| Conread position: | 122-371 |
| Cow position: | chr22:10549239-10549498 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 43, 65 |
| Conread position: | 122-371 |
| Cow position: | chr22:22934282-22934541 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 130-308 |
| Cow position: | chr22:12594036-12594215 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 37, 112 |
| Conread position: | 130-348 |
| Cow position: | chr22:14100250-14100478 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 37, 75 |
| Conread position: | 136-371 |
| Cow position: | chr22:41158388-41158152 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 60 |
| Conread position: | 174-371 |
| Cow position: | chr22:654105-653909 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 36, 52 |
| Conread position: | 195-369 |
| Cow position: | chr22:7595316-7595488 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 88, 115 |
| Conread position: | 195-394 |
| Cow position: | chr22:31110014-31110215 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 84, 129 |
| Conread position: | 199-394 |
| Cow position: | chr22:36364462-36364661 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 94, 114 |
| Conread position: | 200-370 |
| Cow position: | chr22:44092326-44092502 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 208-367 |
| Cow position: | chr22:13866151-13865986 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 36, 13 |
Show alignments to all cow chromosomes.