Cow genome map
| Conread name: | mAY1-MI-P-AY1-npy-f-02-0-UI.s1 |
| Conread position: | 2-370 |
| Cow position: | chr23:2760282-2760660 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 78 |
| Conread position: | 2-370 |
| Cow position: | chr23:2792387-2792006 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 38, 222 |
| Conread position: | 2-370 |
| Cow position: | chr23:15568546-15568161 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-370 |
| Cow position: | chr23:37200140-37199757 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 38, 131 |
| Conread position: | 2-371 |
| Cow position: | chr23:943355-943740 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 2-371 |
| Cow position: | chr23:2321565-2321182 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 38, 160 |
| Conread position: | 2-371 |
| Cow position: | chr23:3708781-3709164 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 248 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 2-371 |
| Cow position: | chr23:4080519-4080904 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-371 |
| Cow position: | chr23:8705242-8705623 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 251 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 38, 162 |
| Conread position: | 2-371 |
| Cow position: | chr23:15179445-15179827 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 38, 191 |
| Conread position: | 2-371 |
| Cow position: | chr23:15527964-15528347 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 38, 60 |
| Conread position: | 2-371 |
| Cow position: | chr23:19316862-19317247 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-371 |
| Cow position: | chr23:19491935-19492319 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 249 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 38, 131 |
| Conread position: | 2-371 |
| Cow position: | chr23:20153842-20153460 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 38, 129 |
| Conread position: | 2-371 |
| Cow position: | chr23:21773535-21773147 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 2-371 |
| Cow position: | chr23:22144923-22144552 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 246 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 47, 93 |
| Conread position: | 2-371 |
| Cow position: | chr23:22989498-22989118 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 51, 207 |
| Conread position: | 2-371 |
| Cow position: | chr23:25350734-25351119 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-371 |
| Cow position: | chr23:36029003-36028618 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 2-371 |
| Cow position: | chr23:36097197-36097582 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-373 |
| Cow position: | chr23:5625191-5624809 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 118, 58 |
| Conread position: | 2-374 |
| Cow position: | chr23:14960573-14960185 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 37, 131 |
| Conread position: | 4-344 |
| Cow position: | chr23:25891408-25891067 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 78, 119 |
| Conread position: | 5-370 |
| Cow position: | chr23:4308796-4308415 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 249 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 35, 128 |
| Conread position: | 5-370 |
| Cow position: | chr23:4891074-4891454 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 48, 205 |
| Conread position: | 5-371 |
| Cow position: | chr23:609112-609488 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 249 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 48, 117 |
| Conread position: | 5-371 |
| Cow position: | chr23:1011451-1011068 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 35, 71 |
| Conread position: | 5-371 |
| Cow position: | chr23:3417948-3417569 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 35, 155 |
| Conread position: | 5-371 |
| Cow position: | chr23:22169268-22169650 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 35, 145 |
| Conread position: | 7-371 |
| Cow position: | chr23:11781176-11781546 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 33, 199 |
| Conread position: | 17-371 |
| Cow position: | chr23:12830218-12829867 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 51, 26 |
| Conread position: | 56-371 |
| Cow position: | chr23:4637887-4637563 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 64, 72 |
| Conread position: | 56-371 |
| Cow position: | chr23:21009171-21008845 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 60-371 |
| Cow position: | chr23:3285200-3285518 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 63, 95 |
| Conread position: | 76-368 |
| Cow position: | chr23:17242602-17242898 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 5, 10 |
| Conread position: | 82-369 |
| Cow position: | chr23:5872101-5871803 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 37, 46 |
| Conread position: | 89-371 |
| Cow position: | chr23:3945785-3945504 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 123, 94 |
| Conread position: | 90-356 |
| Cow position: | chr23:34254244-34253969 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 33, 108 |
| Conread position: | 105-358 |
| Cow position: | chr23:33558018-33557761 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 18, 59 |
| Conread position: | 133-393 |
| Cow position: | chr23:27755394-27755653 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 64, 31 |
| Conread position: | 155-371 |
| Cow position: | chr23:4266082-4265856 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 197-340 |
| Cow position: | chr23:2064550-2064695 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 96, 58 |
Show alignments to all cow chromosomes.