Cow genome map

Conread name: mAY1-MI-P-AY1-npy-f-02-0-UI.s1

Conread position: 1-295
Cow position: chr8:17382487-17382185 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 195
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 289

Conread position: 1-326
Cow position: chr8:55084373-55084703 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 214
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 125

Conread position: 1-369
Cow position: chr8:1151655-1151273 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 240
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 1-369
Cow position: chr8:23386135-23385776 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 241
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 131

Conread position: 1-370
Cow position: chr8:33590999-33591370 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 243
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 39, 48

Conread position: 1-372
Cow position: chr8:23597556-23597920 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 243
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 128

Conread position: 2-295
Cow position: chr8:11240668-11240368 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 196
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 287

Conread position: 2-333
Cow position: chr8:11835160-11835505 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 230
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 130

Conread position: 2-337
Cow position: chr8:11804437-11804774 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 218
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 18

Conread position: 2-368
Cow position: chr8:5019640-5020017 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 247
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 38, 131

Conread position: 2-369
Cow position: chr8:30490299-30489916 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 248
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 47, 191

Conread position: 2-369
Cow position: chr8:42318641-42318259 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 249
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 190

Conread position: 2-369
Cow position: chr8:49219571-49219954 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 247
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 131

Conread position: 2-370
Cow position: chr8:2167890-2167506 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 253
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 190

Conread position: 2-370
Cow position: chr8:3333655-3334043 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 253
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 2-370
Cow position: chr8:3854404-3854024 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 248
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 249

Conread position: 2-370
Cow position: chr8:4689028-4689410 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 255
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 131

Conread position: 2-370
Cow position: chr8:8228766-8228389 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 243
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 127

Conread position: 2-370
Cow position: chr8:15223438-15223818 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 244
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 51, 120

Conread position: 2-370
Cow position: chr8:19333202-19333586 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 255
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 131

Conread position: 2-370
Cow position: chr8:23773264-23773647 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 247
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 107

Conread position: 2-370
Cow position: chr8:25774013-25773627 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 240
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 2-370
Cow position: chr8:38044505-38044118 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 248
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 2-370
Cow position: chr8:60066505-60066889 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 247
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 131

Conread position: 2-371
Cow position: chr8:1109819-1110204 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 252
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 2-371
Cow position: chr8:1116960-1116573 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 249
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 137

Conread position: 2-371
Cow position: chr8:1467754-1468139 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 248
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 2-371
Cow position: chr8:1569749-1570134 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 249
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 2-371
Cow position: chr8:3955673-3956051 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 241
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 120

Conread position: 2-371
Cow position: chr8:6203656-6203275 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 245
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 51, 158

Conread position: 2-371
Cow position: chr8:6465505-6465889 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 253
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 51, 0

Conread position: 2-371
Cow position: chr8:10750971-10751355 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 252
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 236

Conread position: 2-371
Cow position: chr8:12312258-12311873 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 250
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 38, 131

Conread position: 2-371
Cow position: chr8:12446779-12446395 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 252
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 36, 44

Conread position: 2-371
Cow position: chr8:14630601-14630216 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 251
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 2-371
Cow position: chr8:18403699-18403314 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 252
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 2-371
Cow position: chr8:21091705-21091320 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 249
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 2-371
Cow position: chr8:21154716-21154335 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 247
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 50, 159

Conread position: 2-371
Cow position: chr8:22569670-22569284 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 251
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 2-371
Cow position: chr8:26877874-26878261 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 246
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 2-371
Cow position: chr8:29628984-29628599 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 247
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 2-371
Cow position: chr8:30156731-30157115 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 244
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 38, 131

Conread position: 2-371
Cow position: chr8:32435219-32434834 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 244
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 2-371
Cow position: chr8:32629379-32628999 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 242
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 77, 61

Conread position: 2-371
Cow position: chr8:35129168-35128783 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 250
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 2-371
Cow position: chr8:50928477-50928092 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 242
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 2-371
Cow position: chr8:55271899-55271517 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 243
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 159

Conread position: 2-395
Cow position: chr8:1321645-1322051 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 258
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 387

Conread position: 2-423
Cow position: chr8:25413249-25413669 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 272
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 116

Conread position: 5-337
Cow position: chr8:26624011-26624358 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 221
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 5-337
Cow position: chr8:38393264-38393613 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 225
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 128

Conread position: 5-339
Cow position: chr8:58855319-58855661 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 226
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 53, 186

Conread position: 5-368
Cow position: chr8:1501650-1501274 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 241
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 35, 124

Conread position: 5-368
Cow position: chr8:33372615-33372250 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 260
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 54, 18

Conread position: 5-370
Cow position: chr8:44241059-44240679 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 241
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 5-370
Cow position: chr8:49285431-49285052 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 248
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 128

Conread position: 5-371
Cow position: chr8:21251872-21252254 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 241
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 5-394
Cow position: chr8:32814989-32814578 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 96

Conread position: 5-395
Cow position: chr8:50431512-50431109 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 259
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 48, 384

Conread position: 6-350
Cow position: chr8:42486541-42486898 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 233
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 34, 93

Conread position: 6-371
Cow position: chr8:8913355-8913736 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 241
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 127

Conread position: 6-395
Cow position: chr8:12451685-12452087 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 264
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 34, 127

Conread position: 6-428
Cow position: chr8:9738165-9738583 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 276
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 116

Conread position: 7-370
Cow position: chr8:14589238-14588863 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 242
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 126

Conread position: 9-160
Cow position: chr8:14922106-14922263 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 9-369
Cow position: chr8:27653623-27653275 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 36

Conread position: 12-371
Cow position: chr8:948017-947649 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 34

Conread position: 12-371
Cow position: chr8:49385700-49386058 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 255
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 20, 63

Conread position: 32-268
Cow position: chr8:12671543-12671776 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 95, 46

Conread position: 56-371
Cow position: chr8:1431236-1431562 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 205
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 56-371
Cow position: chr8:50284532-50284206 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 213
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 64, 72

Conread position: 56-371
Cow position: chr8:53837627-53837953 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 207
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 57-371
Cow position: chr8:14926199-14925875 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 215
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 43

Conread position: 58-369
Cow position: chr8:8103609-8103290 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 75-368
Cow position: chr8:56385033-56385329 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 206
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 56, 40

Conread position: 75-371
Cow position: chr8:8523524-8523830 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 203
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 48, 101

Conread position: 84-369
Cow position: chr8:27154416-27154121 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 191
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 234

Conread position: 84-371
Cow position: chr8:18658037-18657739 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 196
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 89-370
Cow position: chr8:9994195-9994472 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 184
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 25

Conread position: 97-353
Cow position: chr8:34270392-34270652 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 193
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 25, 176

Conread position: 105-311
Cow position: chr8:11794775-11794983 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 14, 60

Conread position: 107-370
Cow position: chr8:31210108-31209843 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 103, 67

Conread position: 108-411
Cow position: chr8:41919573-41919272 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 221
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 11, 57

Conread position: 109-371
Cow position: chr8:19576433-19576697 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 17, 40

Conread position: 115-371
Cow position: chr8:20356149-20356404 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 168, 58

Conread position: 137-350
Cow position: chr8:28296921-28296707 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 143
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 103

Conread position: 172-367
Cow position: chr8:56466287-56466485 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 36

Conread position: 174-368
Cow position: chr8:26346197-26346397 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 65

Conread position: 201-365
Cow position: chr8:56588629-56588462 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 79, 68

Conread position: 267-367
Cow position: chr8:36616748-36616647 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 0

Show alignments to all cow chromosomes.