Cow genome map
| Conread name: | mAY1-MI-P-AY1-nre-h-04-0-UI.s1 |
| Conread position: | 286-430 |
| Cow position: | chr11:64607006-64607149 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 296-455 |
| Cow position: | chr11:480705-480546 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 32 |
| Conread position: | 300-459 |
| Cow position: | chr11:13592969-13592808 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 149 |
| Conread position: | 300-461 |
| Cow position: | chr11:17991456-17991289 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 304-451 |
| Cow position: | chr11:70837622-70837766 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 109, 23 |
| Conread position: | 317-428 |
| Cow position: | chr11:12080054-12079942 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 319-454 |
| Cow position: | chr11:13843678-13843546 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 319-470 |
| Cow position: | chr11:62729133-62728985 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 18 |
| Conread position: | 334-495 |
| Cow position: | chr11:36128684-36128520 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 341-495 |
| Cow position: | chr11:29983421-29983569 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 344-446 |
| Cow position: | chr11:8419747-8419849 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 344-447 |
| Cow position: | chr11:48932406-48932509 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 344-451 |
| Cow position: | chr11:37982364-37982472 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 344-462 |
| Cow position: | chr11:36849140-36849022 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 344-472 |
| Cow position: | chr11:34623398-34623269 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 344-477 |
| Cow position: | chr11:77470280-77470413 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 344-495 |
| Cow position: | chr11:6156055-6156209 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 345-494 |
| Cow position: | chr11:3234322-3234174 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 347-472 |
| Cow position: | chr11:63550035-63549913 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 401-495 |
| Cow position: | chr11:29983518-29983615 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 403-491 |
| Cow position: | chr11:25931871-25931958 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 78 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 407-489 |
| Cow position: | chr11:14492679-14492597 (view UCSC Genome Browser custom track) |
| Alignm length: | 83 |
| Alignm identity: | 76 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 407-491 |
| Cow position: | chr11:25931872-25931956 (view UCSC Genome Browser custom track) |
| Alignm length: | 85 |
| Alignm identity: | 77 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 407-493 |
| Cow position: | chr11:14492681-14492595 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 77 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 408-490 |
| Cow position: | chr11:14492676-14492594 (view UCSC Genome Browser custom track) |
| Alignm length: | 83 |
| Alignm identity: | 75 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.