Cow genome map
| Conread name: | mAY1-MI-P-AY1-nre-h-04-0-UI.s1 |
| Conread position: | 294-430 |
| Cow position: | chr6:26764531-26764669 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 313-474 |
| Cow position: | chr6:14958027-14958190 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 319-462 |
| Cow position: | chr6:32809580-32809437 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 320-433 |
| Cow position: | chr6:134774-134657 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 327-455 |
| Cow position: | chr6:17313994-17313867 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 327-470 |
| Cow position: | chr6:44261337-44261487 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 327-472 |
| Cow position: | chr6:8209318-8209462 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 37, 100 |
| Conread position: | 328-467 |
| Cow position: | chr6:30974337-30974191 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 329-451 |
| Cow position: | chr6:61128671-61128796 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 329-466 |
| Cow position: | chr6:12711538-12711676 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 332-457 |
| Cow position: | chr6:54547853-54547728 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 333-448 |
| Cow position: | chr6:21869377-21869493 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 91 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 339-451 |
| Cow position: | chr6:54364485-54364593 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 343-485 |
| Cow position: | chr6:35964242-35964378 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 344-448 |
| Cow position: | chr6:2617954-2618060 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 344-479 |
| Cow position: | chr6:41936968-41937104 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 344-505 |
| Cow position: | chr6:38419140-38418976 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 346-477 |
| Cow position: | chr6:66531531-66531661 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 361-473 |
| Cow position: | chr6:46292133-46292245 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 405-495 |
| Cow position: | chr6:46789225-46789127 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 407-495 |
| Cow position: | chr6:65904075-65903987 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 77 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 407-495 |
| Cow position: | chr6:65904101-65904013 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 77 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 407-495 |
| Cow position: | chr6:65904103-65904015 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 77 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 407-495 |
| Cow position: | chr6:65904105-65904017 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 77 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 408-495 |
| Cow position: | chr6:46789278-46789189 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 78 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
Show alignments to all cow chromosomes.