Cow genome map

Conread name: mCP0-MI-P-CP0-nvg-d-03-0-UI.s1

Conread position: 1-224
Cow position: chr18:21768510-21768730 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 43, 88

Conread position: 1-265
Cow position: chr18:1392687-1392412 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 184
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 1-274
Cow position: chr18:4490017-4489735 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 45, 60

Conread position: 1-283
Cow position: chr18:3180299-3180587 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 39, 196

Conread position: 1-288
Cow position: chr18:38363369-38363658 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 196
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 45, 70

Conread position: 1-290
Cow position: chr18:7966137-7966426 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 183
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 76

Conread position: 1-292
Cow position: chr18:46108499-46108199 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 197
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 193

Conread position: 1-294
Cow position: chr18:11233312-11233606 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 207, 84

Conread position: 1-296
Cow position: chr18:53093121-53092826 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 43, 61

Conread position: 1-296
Cow position: chr18:55701773-55701474 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 192
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 42, 270

Conread position: 2-281
Cow position: chr18:3115343-3115629 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 181
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 2-296
Cow position: chr18:39811690-39811395 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 42, 75

Conread position: 3-289
Cow position: chr18:23630705-23630434 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 10

Conread position: 5-288
Cow position: chr18:29080702-29080990 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 188
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 47, 242

Conread position: 6-293
Cow position: chr18:37189399-37189106 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 195
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 26, 190

Conread position: 21-287
Cow position: chr18:38211077-38211338 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 92, 100

Conread position: 25-274
Cow position: chr18:55714752-55714500 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 170
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 40

Conread position: 27-271
Cow position: chr18:6399712-6399459 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 54

Conread position: 27-296
Cow position: chr18:52684680-52684414 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 176
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 22, 68

Conread position: 28-263
Cow position: chr18:40047577-40047349 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 180
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 9, 33

Conread position: 28-286
Cow position: chr18:36355460-36355734 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 15, 163

Conread position: 29-290
Cow position: chr18:18843939-18844195 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 54, 18

Conread position: 29-296
Cow position: chr18:46880786-46880519 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 176
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 150

Conread position: 31-287
Cow position: chr18:46276377-46276120 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 9, 30

Conread position: 31-294
Cow position: chr18:34813575-34813840 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 180
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 123, 9

Conread position: 32-270
Cow position: chr18:56183575-56183338 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 12

Conread position: 32-274
Cow position: chr18:47824841-47824608 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 32-292
Cow position: chr18:31557233-31556974 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 27, 39

Conread position: 33-261
Cow position: chr18:47565756-47565968 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 35-257
Cow position: chr18:17368650-17368428 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 151
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 14, 22

Conread position: 36-278
Cow position: chr18:50974365-50974118 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 8, 229

Conread position: 37-258
Cow position: chr18:39001870-39001664 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 183, 7

Conread position: 37-274
Cow position: chr18:42293123-42292896 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 144, 0

Conread position: 37-283
Cow position: chr18:34219991-34219730 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 100, 0

Conread position: 37-293
Cow position: chr18:29248716-29248970 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 171
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 5, 138

Conread position: 37-294
Cow position: chr18:39623731-39623990 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 11, 0

Conread position: 37-295
Cow position: chr18:42290395-42290143 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 227, 144

Conread position: 37-296
Cow position: chr18:4668567-4668320 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 10, 61

Conread position: 38-190
Cow position: chr18:50082325-50082172 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 38-270
Cow position: chr18:2619280-2619044 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 159
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 148, 202

Conread position: 38-270
Cow position: chr18:39662712-39662943 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 149, 118

Conread position: 38-271
Cow position: chr18:51757027-51757257 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 21, 29

Conread position: 38-273
Cow position: chr18:52649413-52649174 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 123, 9

Conread position: 38-274
Cow position: chr18:18919025-18918797 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 80, 0

Conread position: 38-274
Cow position: chr18:42751676-42751422 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 107

Conread position: 38-274
Cow position: chr18:50959419-50959655 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 60, 73

Conread position: 38-282
Cow position: chr18:35452859-35453103 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 157
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 38-283
Cow position: chr18:32873524-32873774 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 38-284
Cow position: chr18:6470026-6470268 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 12, 155

Conread position: 38-286
Cow position: chr18:54572358-54572112 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 70, 21

Conread position: 38-287
Cow position: chr18:18961902-18961653 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 140, 132

Conread position: 38-287
Cow position: chr18:21782625-21782864 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 6, 0

Conread position: 38-287
Cow position: chr18:43806388-43806632 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 168
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 135, 74

Conread position: 38-287
Cow position: chr18:46452949-46452704 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 69, 155

Conread position: 38-289
Cow position: chr18:15809865-15809629 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 124, 13

Conread position: 38-290
Cow position: chr18:1023922-1024178 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 129, 10

Conread position: 38-290
Cow position: chr18:20174196-20173955 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 5, 15

Conread position: 38-290
Cow position: chr18:43950755-43951011 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 6, 143

Conread position: 38-290
Cow position: chr18:55747618-55747872 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 12, 104

Conread position: 38-294
Cow position: chr18:19687956-19688214 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 172
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 38-295
Cow position: chr18:17649805-17649552 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 119, 0

Conread position: 38-295
Cow position: chr18:23091045-23090783 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 5, 167

Conread position: 38-296
Cow position: chr18:4495953-4495701 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 237, 151

Conread position: 38-296
Cow position: chr18:12584908-12584656 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 21, 157

Conread position: 38-296
Cow position: chr18:16812086-16812343 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 62, 28

Conread position: 38-296
Cow position: chr18:30225598-30225342 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 11, 169

Conread position: 39-200
Cow position: chr18:19273162-19273001 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 39-205
Cow position: chr18:19896517-19896353 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 152, 0

Conread position: 39-205
Cow position: chr18:28923912-28923749 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 39-258
Cow position: chr18:4758098-4757884 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 157, 71

Conread position: 39-269
Cow position: chr18:30360216-30359982 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 12, 0

Conread position: 39-270
Cow position: chr18:31082414-31082181 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 139, 0

Conread position: 39-274
Cow position: chr18:2592231-2591994 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 57

Conread position: 39-274
Cow position: chr18:12058938-12059160 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 39-274
Cow position: chr18:12113429-12113202 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 39-274
Cow position: chr18:37303080-37303320 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 52, 177

Conread position: 39-288
Cow position: chr18:27078802-27079046 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 69, 0

Conread position: 39-293
Cow position: chr18:51691527-51691276 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 185, 8

Conread position: 39-294
Cow position: chr18:14586536-14586293 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 156, 0

Conread position: 39-294
Cow position: chr18:29371801-29372056 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 39-295
Cow position: chr18:6005565-6005314 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 52, 8

Conread position: 39-295
Cow position: chr18:23162828-23163081 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 146, 8

Conread position: 39-296
Cow position: chr18:52637595-52637339 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 164
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 140, 0

Conread position: 39-296
Cow position: chr18:55505341-55505589 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 77, 0

Conread position: 40-205
Cow position: chr18:19883467-19883633 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 40-219
Cow position: chr18:47835762-47835938 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 40-242
Cow position: chr18:52413900-52414108 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 40-250
Cow position: chr18:49268052-49267843 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 138
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 40-263
Cow position: chr18:29495093-29495317 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 155, 8

Conread position: 40-268
Cow position: chr18:54513051-54513278 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 13

Conread position: 40-269
Cow position: chr18:19143574-19143343 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 114, 54

Conread position: 40-273
Cow position: chr18:5647748-5647973 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 147, 0

Conread position: 40-274
Cow position: chr18:4626850-4626624 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 40-274
Cow position: chr18:25106880-25107114 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 154
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 115

Conread position: 40-274
Cow position: chr18:51383461-51383232 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 7, 33

Conread position: 40-281
Cow position: chr18:51643430-51643197 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 125, 0

Conread position: 40-281
Cow position: chr18:56155455-56155689 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 23, 51

Conread position: 40-283
Cow position: chr18:14225325-14225563 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 9, 155

Conread position: 40-283
Cow position: chr18:49841218-49841462 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 163, 13

Conread position: 40-284
Cow position: chr18:42438212-42437980 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 86, 96

Conread position: 40-286
Cow position: chr18:4884584-4884341 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 7, 68

Conread position: 40-289
Cow position: chr18:3164579-3164332 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 110, 101

Conread position: 40-289
Cow position: chr18:49038397-49038635 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 185
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 147, 0

Conread position: 40-290
Cow position: chr18:16545527-16545277 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 236, 55

Conread position: 40-290
Cow position: chr18:20641561-20641319 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 150, 0

Conread position: 40-290
Cow position: chr18:22120950-22120703 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 145, 163

Conread position: 40-290
Cow position: chr18:52251922-52251672 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 40-291
Cow position: chr18:44262565-44262808 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 17, 60

Conread position: 40-292
Cow position: chr18:15613925-15613684 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 149, 0

Conread position: 40-292
Cow position: chr18:25598299-25598053 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 14, 143

Conread position: 40-294
Cow position: chr18:51405968-51405729 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 230, 11

Conread position: 40-294
Cow position: chr18:56181526-56181270 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 58, 118

Conread position: 40-295
Cow position: chr18:4748947-4748699 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 169
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 233, 153

Conread position: 40-295
Cow position: chr18:43797020-43796777 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 143, 0

Conread position: 40-296
Cow position: chr18:5600572-5600828 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 176
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 233, 7

Conread position: 40-296
Cow position: chr18:9756013-9756270 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 184, 218

Conread position: 40-296
Cow position: chr18:12775849-12775593 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 40-296
Cow position: chr18:19868323-19868070 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 55, 0

Conread position: 40-296
Cow position: chr18:30430697-30430957 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 176
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 36

Conread position: 40-296
Cow position: chr18:36229746-36229487 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 169
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 103, 209

Conread position: 40-296
Cow position: chr18:51676153-51675896 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 25, 11

Conread position: 40-296
Cow position: chr18:51827215-51827467 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 9, 98

Conread position: 40-296
Cow position: chr18:55692751-55693006 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 176, 0

Conread position: 41-203
Cow position: chr18:22214424-22214586 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 41-208
Cow position: chr18:51392703-51392540 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 41-249
Cow position: chr18:7481089-7481292 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 146, 55

Conread position: 41-250
Cow position: chr18:34834432-34834638 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 136, 38

Conread position: 41-256
Cow position: chr18:42455086-42454871 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 145
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 8, 78

Conread position: 41-260
Cow position: chr18:19629070-19628850 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 146
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 41-270
Cow position: chr18:6310018-6310242 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 5, 67

Conread position: 41-270
Cow position: chr18:9066634-9066862 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 156
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 149

Conread position: 41-270
Cow position: chr18:55499009-55499232 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 41-273
Cow position: chr18:47548050-47547817 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 156, 129

Conread position: 41-274
Cow position: chr18:19765125-19765352 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 35

Conread position: 41-282
Cow position: chr18:55552903-55553147 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 144, 0

Conread position: 41-289
Cow position: chr18:10214254-10214011 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 88, 7

Conread position: 41-289
Cow position: chr18:11691472-11691225 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 83, 0

Conread position: 41-292
Cow position: chr18:55549666-55549916 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 166
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 41-294
Cow position: chr18:7965167-7965418 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 8, 101

Conread position: 41-296
Cow position: chr18:7956081-7956337 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 6, 203

Conread position: 41-296
Cow position: chr18:9029546-9029801 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 168
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 41-296
Cow position: chr18:18962360-18962623 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 176
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 41-296
Cow position: chr18:32599987-32600242 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 5, 200

Conread position: 42-267
Cow position: chr18:29065445-29065233 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 42-270
Cow position: chr18:9365855-9366084 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 9, 148

Conread position: 42-270
Cow position: chr18:33158880-33159105 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 41, 0

Conread position: 42-274
Cow position: chr18:5072473-5072251 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 86, 97

Conread position: 42-274
Cow position: chr18:8171148-8170925 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 141, 0

Conread position: 42-274
Cow position: chr18:38937759-38937986 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 119, 32

Conread position: 42-274
Cow position: chr18:43555587-43555347 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 144, 0

Conread position: 42-282
Cow position: chr18:35367255-35367031 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 117, 62

Conread position: 42-283
Cow position: chr18:49015066-49015291 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 42-285
Cow position: chr18:11779592-11779827 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 123, 9

Conread position: 42-285
Cow position: chr18:23447124-23446882 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 146, 0

Conread position: 42-290
Cow position: chr18:52403030-52402781 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 83, 127

Conread position: 42-292
Cow position: chr18:48441725-48441971 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 163
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 177, 164

Conread position: 42-292
Cow position: chr18:48633723-48633961 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 175, 58

Conread position: 42-296
Cow position: chr18:380870-381112 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 42-296
Cow position: chr18:25063897-25063643 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 166
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 43-207
Cow position: chr18:5078835-5078672 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 124, 0

Conread position: 43-236
Cow position: chr18:858762-858953 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 133
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 19, 30

Conread position: 43-263
Cow position: chr18:24672180-24672397 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 53

Conread position: 43-274
Cow position: chr18:135716-135494 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 96, 0

Conread position: 43-274
Cow position: chr18:28657973-28657753 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 147, 0

Conread position: 43-290
Cow position: chr18:23941685-23941434 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 72, 47

Conread position: 43-292
Cow position: chr18:35751439-35751194 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 122, 193

Conread position: 43-295
Cow position: chr18:20462757-20462520 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 44-203
Cow position: chr18:49324495-49324338 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 7, 63

Conread position: 44-213
Cow position: chr18:21192472-21192307 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 44-236
Cow position: chr18:24508297-24508096 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 44-238
Cow position: chr18:5995409-5995601 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 135, 0

Conread position: 44-239
Cow position: chr18:11754072-11754264 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 44-242
Cow position: chr18:2774199-2774002 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 126, 0

Conread position: 44-252
Cow position: chr18:20175255-20175050 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 96, 0

Conread position: 44-257
Cow position: chr18:24759717-24759510 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 19, 9

Conread position: 44-261
Cow position: chr18:35874019-35874231 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 184, 36

Conread position: 44-263
Cow position: chr18:24266468-24266248 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 144, 0

Conread position: 44-268
Cow position: chr18:5578248-5578455 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 44-270
Cow position: chr18:3417100-3417328 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 143, 77

Conread position: 44-270
Cow position: chr18:10977273-10977053 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 6, 65

Conread position: 44-270
Cow position: chr18:35889156-35888926 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 133, 36

Conread position: 44-272
Cow position: chr18:37002571-37002801 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 153
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 159, 183

Conread position: 44-273
Cow position: chr18:22055935-22055695 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 107, 0

Conread position: 44-274
Cow position: chr18:1399411-1399186 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 18, 31

Conread position: 44-274
Cow position: chr18:9974389-9974164 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 126, 0

Conread position: 44-274
Cow position: chr18:10954407-10954630 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 153
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 44-274
Cow position: chr18:17391054-17390824 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 166, 81

Conread position: 44-274
Cow position: chr18:17974571-17974790 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 44-274
Cow position: chr18:22569127-22568902 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 115, 127

Conread position: 44-274
Cow position: chr18:38985632-38985857 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 39, 145

Conread position: 44-274
Cow position: chr18:45622865-45622636 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 155
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 187, 0

Conread position: 44-274
Cow position: chr18:47392345-47392575 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 154
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 44-274
Cow position: chr18:52454871-52454639 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 150, 210

Conread position: 44-281
Cow position: chr18:24719252-24719482 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 218, 147

Conread position: 44-281
Cow position: chr18:35535207-35534978 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 137, 0

Conread position: 44-282
Cow position: chr18:28930697-28930466 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 232, 138

Conread position: 44-283
Cow position: chr18:11867276-11867517 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 86, 98

Conread position: 44-285
Cow position: chr18:10065587-10065339 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 71, 166

Conread position: 44-285
Cow position: chr18:50359270-50359502 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 6, 137

Conread position: 44-285
Cow position: chr18:50382192-50382428 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 145, 40

Conread position: 44-286
Cow position: chr18:10051687-10051925 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 229, 34

Conread position: 44-286
Cow position: chr18:22790146-22789912 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 44-287
Cow position: chr18:6881414-6881177 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 118, 67

Conread position: 44-287
Cow position: chr18:7109069-7109312 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 164
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 223, 126

Conread position: 44-287
Cow position: chr18:12117909-12117674 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 47

Conread position: 44-287
Cow position: chr18:45104502-45104250 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 98, 126

Conread position: 44-288
Cow position: chr18:16659493-16659247 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 27, 16

Conread position: 44-288
Cow position: chr18:42431672-42431432 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 227, 143

Conread position: 44-289
Cow position: chr18:9010649-9010885 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 44-289
Cow position: chr18:15517232-15516997 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 96, 0

Conread position: 44-290
Cow position: chr18:23615941-23615693 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 40, 114

Conread position: 44-291
Cow position: chr18:7414607-7414848 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 228, 28

Conread position: 44-291
Cow position: chr18:31672572-31672334 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 234, 22

Conread position: 44-291
Cow position: chr18:38601946-38601701 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 134

Conread position: 44-292
Cow position: chr18:10576044-10576286 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 39, 125

Conread position: 44-292
Cow position: chr18:18592412-18592648 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 119, 0

Conread position: 44-292
Cow position: chr18:29648723-29648964 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 126, 0

Conread position: 44-292
Cow position: chr18:40281163-40280912 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 44-293
Cow position: chr18:3211817-3212065 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 44-293
Cow position: chr18:43283818-43283570 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 114

Conread position: 44-293
Cow position: chr18:44908992-44909237 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 152, 0

Conread position: 44-294
Cow position: chr18:4625827-4626078 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 190, 0

Conread position: 44-296
Cow position: chr18:9089639-9089880 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 232, 58

Conread position: 44-296
Cow position: chr18:42212383-42212634 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 168
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 20, 9

Conread position: 44-296
Cow position: chr18:45558086-45558331 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 64, 148

Conread position: 45-270
Cow position: chr18:3158656-3158421 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 14

Conread position: 45-274
Cow position: chr18:12242217-12242443 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 26, 14

Conread position: 45-274
Cow position: chr18:16044211-16043983 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 124, 188

Conread position: 45-274
Cow position: chr18:42479646-42479414 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 176
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 172, 149

Conread position: 45-274
Cow position: chr18:45903954-45903730 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 61, 0

Conread position: 45-285
Cow position: chr18:10904790-10905024 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 118, 0

Conread position: 45-294
Cow position: chr18:48713491-48713727 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 146, 0

Conread position: 45-295
Cow position: chr18:29958224-29957995 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 45-296
Cow position: chr18:12270442-12270699 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 150, 62

Conread position: 45-296
Cow position: chr18:47416942-47417184 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 92, 0

Conread position: 46-229
Cow position: chr18:48961875-48962060 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 12

Conread position: 46-274
Cow position: chr18:1954648-1954414 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 179
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 146, 182

Conread position: 46-274
Cow position: chr18:4556225-4555998 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 143, 60

Conread position: 46-283
Cow position: chr18:33896483-33896239 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 39, 207

Conread position: 46-286
Cow position: chr18:32189566-32189339 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 129, 0

Conread position: 46-292
Cow position: chr18:8880096-8880340 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 160
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 46-294
Cow position: chr18:10891457-10891697 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 46-296
Cow position: chr18:1571294-1571051 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 189, 49

Conread position: 46-296
Cow position: chr18:11790866-11791104 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 113, 60

Conread position: 46-296
Cow position: chr18:55000800-55000550 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 167
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 151, 92

Conread position: 47-260
Cow position: chr18:22516592-22516384 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 47-270
Cow position: chr18:7952146-7952372 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 150
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 157, 47

Conread position: 47-270
Cow position: chr18:51192798-51192586 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 144, 0

Conread position: 47-274
Cow position: chr18:4649504-4649719 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 19

Conread position: 47-288
Cow position: chr18:2773450-2773208 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 143, 227

Conread position: 47-288
Cow position: chr18:2776953-2776711 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 143, 227

Conread position: 47-293
Cow position: chr18:48000879-48000643 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 48-289
Cow position: chr18:44917701-44917935 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 5, 0

Conread position: 48-294
Cow position: chr18:12273601-12273838 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 17, 11

Conread position: 48-294
Cow position: chr18:23169521-23169766 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 166
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 218, 0

Conread position: 48-296
Cow position: chr18:42432144-42431908 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 8, 59

Conread position: 49-268
Cow position: chr18:3085572-3085347 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 48, 21

Conread position: 49-280
Cow position: chr18:51644074-51643843 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 50-294
Cow position: chr18:25601374-25601137 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 166
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 228, 24

Conread position: 51-287
Cow position: chr18:42988366-42988126 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 53, 196

Conread position: 51-289
Cow position: chr18:242354-242603 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 237

Conread position: 51-296
Cow position: chr18:44137442-44137682 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 54-291
Cow position: chr18:39875309-39875059 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 141, 12

Conread position: 55-269
Cow position: chr18:25757361-25757153 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 55-284
Cow position: chr18:14172257-14172037 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 50, 0

Conread position: 55-284
Cow position: chr18:19640922-19641150 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 190, 0

Conread position: 55-285
Cow position: chr18:42427569-42427793 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 176
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 8, 133

Conread position: 56-292
Cow position: chr18:50632491-50632262 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 119, 0

Conread position: 60-270
Cow position: chr18:46048707-46048916 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 164, 131

Conread position: 60-274
Cow position: chr18:11657612-11657825 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 147
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 60-296
Cow position: chr18:45898847-45899083 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 61-294
Cow position: chr18:50566858-50567090 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 5, 0

Conread position: 62-215
Cow position: chr18:27109335-27109183 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 133, 0

Conread position: 62-296
Cow position: chr18:21969846-21969613 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 125, 13

Conread position: 63-296
Cow position: chr18:23648880-23649114 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 125, 0

Conread position: 66-273
Cow position: chr18:11672004-11672218 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 129, 60

Conread position: 66-286
Cow position: chr18:5632229-5632442 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 125, 0

Conread position: 66-287
Cow position: chr18:20309053-20309274 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 148
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 180, 62

Conread position: 66-289
Cow position: chr18:37188036-37187811 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 207, 0

Conread position: 66-290
Cow position: chr18:35827412-35827196 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 41, 0

Conread position: 66-295
Cow position: chr18:19796962-19796730 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 67-294
Cow position: chr18:238153-237927 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 10, 0

Conread position: 68-270
Cow position: chr18:39168495-39168692 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 69-289
Cow position: chr18:16227521-16227742 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 121, 0

Conread position: 70-291
Cow position: chr18:41724853-41724635 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 108, 177

Conread position: 74-242
Cow position: chr18:47920716-47920883 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 74-274
Cow position: chr18:36826106-36826299 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 74-274
Cow position: chr18:52382871-52383073 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 74-274
Cow position: chr18:55722466-55722666 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 105

Conread position: 75-296
Cow position: chr18:22180798-22180593 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 76-246
Cow position: chr18:23821861-23821691 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 76-270
Cow position: chr18:19809711-19809521 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 118, 0

Conread position: 76-270
Cow position: chr18:47868581-47868758 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 76-274
Cow position: chr18:34490251-34490447 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 46, 112

Conread position: 76-274
Cow position: chr18:39097607-39097406 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 65

Conread position: 76-290
Cow position: chr18:45897703-45897909 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 76-292
Cow position: chr18:11330190-11330407 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 106, 0

Conread position: 76-294
Cow position: chr18:18664402-18664178 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 106, 0

Conread position: 76-296
Cow position: chr18:45185843-45186057 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 180, 0

Conread position: 77-260
Cow position: chr18:41639187-41639007 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 77-269
Cow position: chr18:49161331-49161139 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 122, 90

Conread position: 77-273
Cow position: chr18:11434725-11434917 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 118, 0

Conread position: 77-283
Cow position: chr18:35786028-35786228 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 133, 0

Conread position: 77-284
Cow position: chr18:47802118-47801919 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 196, 30

Conread position: 77-288
Cow position: chr18:49603071-49602862 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 113, 0

Conread position: 77-296
Cow position: chr18:24946058-24946268 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 23, 78

Conread position: 78-274
Cow position: chr18:35715638-35715440 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 5

Conread position: 78-286
Cow position: chr18:11856874-11857074 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 113, 0

Conread position: 80-270
Cow position: chr18:19962168-19961974 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 118, 13

Conread position: 80-274
Cow position: chr18:5189719-5189525 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 11, 144

Conread position: 80-274
Cow position: chr18:23653143-23652947 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 101, 139

Conread position: 81-208
Cow position: chr18:49982706-49982833 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 81-277
Cow position: chr18:35795246-35795051 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 21, 16

Conread position: 81-281
Cow position: chr18:8208449-8208250 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 101, 111

Conread position: 81-282
Cow position: chr18:46985594-46985393 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 81-286
Cow position: chr18:697241-697041 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 60, 0

Conread position: 81-289
Cow position: chr18:4152578-4152372 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 78, 99

Conread position: 81-290
Cow position: chr18:39689763-39689972 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 81-290
Cow position: chr18:51395909-51395712 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 81-291
Cow position: chr18:31159297-31159089 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 86, 117

Conread position: 81-294
Cow position: chr18:39115142-39114932 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 170, 0

Conread position: 81-294
Cow position: chr18:49970677-49970465 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 162, 0

Conread position: 81-296
Cow position: chr18:2108223-2108436 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 121, 93

Conread position: 81-296
Cow position: chr18:49040640-49040414 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 106, 0

Conread position: 81-296
Cow position: chr18:52691690-52691904 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 146
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 90, 57

Conread position: 82-272
Cow position: chr18:24022595-24022779 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 111, 0

Conread position: 82-282
Cow position: chr18:22905981-22905781 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 82-290
Cow position: chr18:23380108-23380309 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 98, 0

Conread position: 85-290
Cow position: chr18:45573360-45573563 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 119, 0

Conread position: 85-294
Cow position: chr18:52863557-52863337 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 87-282
Cow position: chr18:28322639-28322827 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 187, 87

Conread position: 87-291
Cow position: chr18:21187288-21187485 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 184, 75

Conread position: 88-282
Cow position: chr18:36734580-36734386 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 134
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 88-284
Cow position: chr18:4530542-4530733 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 185, 116

Conread position: 90-266
Cow position: chr18:26586629-26586454 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 124
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 90-293
Cow position: chr18:14874537-14874740 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 90-296
Cow position: chr18:21051098-21050902 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 100, 0

Conread position: 91-286
Cow position: chr18:10517087-10517287 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 19, 112

Conread position: 92-290
Cow position: chr18:39860784-39860595 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 179, 35

Conread position: 92-291
Cow position: chr18:29188373-29188578 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 117, 0

Conread position: 92-291
Cow position: chr18:56150488-56150279 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 98, 23

Conread position: 92-296
Cow position: chr18:27637479-27637680 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 143, 0

Conread position: 92-296
Cow position: chr18:45453697-45453896 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 138
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 93-260
Cow position: chr18:306730-306564 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 94-293
Cow position: chr18:10898788-10898988 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 133
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 179, 0

Conread position: 96-296
Cow position: chr18:2793980-2793788 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 85, 0

Conread position: 96-296
Cow position: chr18:3193696-3193897 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 138
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 63, 104

Conread position: 96-296
Cow position: chr18:44514078-44514279 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 89, 10

Conread position: 97-260
Cow position: chr18:48112975-48112814 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 97-262
Cow position: chr18:37382101-37381937 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 84, 72

Conread position: 97-274
Cow position: chr18:30341192-30341016 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 98, 0

Conread position: 97-278
Cow position: chr18:39710099-39710285 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 90, 0

Conread position: 97-283
Cow position: chr18:52387228-52387043 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 114, 0

Conread position: 97-292
Cow position: chr18:16381850-16382045 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 142, 134

Conread position: 97-292
Cow position: chr18:21878465-21878271 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 40

Conread position: 97-292
Cow position: chr18:43801766-43801577 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 97-294
Cow position: chr18:14587263-14587462 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 175, 0

Conread position: 97-294
Cow position: chr18:21401309-21401112 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 97-294
Cow position: chr18:44773923-44774121 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 90, 55

Conread position: 97-295
Cow position: chr18:4000338-4000538 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 101, 0

Conread position: 97-295
Cow position: chr18:14201251-14201053 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 97-296
Cow position: chr18:17195353-17195158 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 86, 0

Conread position: 99-290
Cow position: chr18:22328137-22328328 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 99-292
Cow position: chr18:47175387-47175194 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 123, 39

Conread position: 100-283
Cow position: chr18:9596178-9596352 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 100-285
Cow position: chr18:34444742-34444560 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 7, 96

Conread position: 101-284
Cow position: chr18:47419795-47419971 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 102-295
Cow position: chr18:53795478-53795671 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 106-286
Cow position: chr18:1931457-1931280 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 167, 91

Conread position: 107-260
Cow position: chr18:26998887-26999041 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 75, 67

Conread position: 107-268
Cow position: chr18:3098030-3097865 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 107-270
Cow position: chr18:35857922-35857762 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 76, 0

Conread position: 107-274
Cow position: chr18:9818770-9818929 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 107-274
Cow position: chr18:9895992-9895831 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 65, 41

Conread position: 107-274
Cow position: chr18:44044341-44044174 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 59, 35

Conread position: 107-274
Cow position: chr18:49281061-49280897 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 142, 0

Conread position: 107-281
Cow position: chr18:47096431-47096595 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 107-282
Cow position: chr18:44206082-44205920 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 107-283
Cow position: chr18:12143948-12143775 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 169, 85

Conread position: 107-285
Cow position: chr18:42978643-42978458 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 83, 175

Conread position: 107-287
Cow position: chr18:3709232-3709410 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 56, 0

Conread position: 107-290
Cow position: chr18:1549547-1549358 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 107-290
Cow position: chr18:36501076-36500905 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 71, 83

Conread position: 107-291
Cow position: chr18:56463728-56463545 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 28, 0

Conread position: 107-292
Cow position: chr18:47486046-47486232 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 155, 67

Conread position: 107-296
Cow position: chr18:4718261-4718449 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 166, 144

Conread position: 107-296
Cow position: chr18:22045411-22045223 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 19, 0

Conread position: 108-246
Cow position: chr18:48594213-48594075 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 108-262
Cow position: chr18:47306904-47306750 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 108-268
Cow position: chr18:41025126-41024958 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 108-270
Cow position: chr18:104052-104218 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 108-274
Cow position: chr18:3132767-3132607 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 108-274
Cow position: chr18:12023634-12023473 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 108-274
Cow position: chr18:50004702-50004540 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 84, 0

Conread position: 108-286
Cow position: chr18:52644466-52644295 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 108-289
Cow position: chr18:50276240-50276063 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 89, 0

Conread position: 108-295
Cow position: chr18:8975399-8975580 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 166, 74

Conread position: 108-295
Cow position: chr18:14871601-14871417 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 108-295
Cow position: chr18:48092914-48092726 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 108-296
Cow position: chr18:3412364-3412555 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 159, 0

Conread position: 108-296
Cow position: chr18:35950038-35950233 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 108-296
Cow position: chr18:41702837-41703022 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 83, 0

Conread position: 109-263
Cow position: chr18:41253544-41253698 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 109-285
Cow position: chr18:15351726-15351549 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 83, 142

Conread position: 109-293
Cow position: chr18:36098370-36098543 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 110-274
Cow position: chr18:2576695-2576527 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 79, 0

Conread position: 110-274
Cow position: chr18:40028220-40028390 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 110-288
Cow position: chr18:50263918-50263752 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 110-292
Cow position: chr18:200284-200102 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 8

Conread position: 111-279
Cow position: chr18:51655172-51655011 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 116, 27

Conread position: 111-290
Cow position: chr18:51675276-51675097 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 91, 63

Conread position: 111-290
Cow position: chr18:51711743-51711567 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 96, 45

Conread position: 112-285
Cow position: chr18:5730237-5730060 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 112-292
Cow position: chr18:29091745-29091911 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 113-271
Cow position: chr18:7134284-7134444 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 113-283
Cow position: chr18:16313387-16313551 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 113-290
Cow position: chr18:4485607-4485779 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 165, 76

Conread position: 113-294
Cow position: chr18:46277281-46277099 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 160

Conread position: 113-295
Cow position: chr18:21751386-21751568 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 166, 74

Conread position: 114-270
Cow position: chr18:19229926-19230084 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 114-290
Cow position: chr18:21528656-21528831 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 38, 74

Conread position: 114-292
Cow position: chr18:9642875-9642692 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 110, 0

Conread position: 115-245
Cow position: chr18:23311291-23311158 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 115-256
Cow position: chr18:31727634-31727497 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 115-264
Cow position: chr18:19143962-19143814 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 115-282
Cow position: chr18:29683464-29683301 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 152, 0

Conread position: 115-287
Cow position: chr18:21724159-21723987 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 115-288
Cow position: chr18:1662575-1662402 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 115-288
Cow position: chr18:2144581-2144751 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 164, 81

Conread position: 115-289
Cow position: chr18:1859126-1858952 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 115-289
Cow position: chr18:10668343-10668516 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 120, 0

Conread position: 115-290
Cow position: chr18:892043-891870 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 115-294
Cow position: chr18:32002-32177 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 126, 0

Conread position: 115-294
Cow position: chr18:32992393-32992566 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 80, 0

Conread position: 115-294
Cow position: chr18:55723681-55723858 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 164, 25

Conread position: 116-274
Cow position: chr18:49440852-49441009 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 71, 0

Conread position: 116-288
Cow position: chr18:46279886-46279711 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 116-292
Cow position: chr18:20998404-20998226 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 64, 0

Conread position: 117-263
Cow position: chr18:44548734-44548591 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 117-274
Cow position: chr18:56011369-56011212 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 117-293
Cow position: chr18:34389371-34389196 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 117-294
Cow position: chr18:16137269-16137092 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 61, 129

Conread position: 120-263
Cow position: chr18:23947634-23947777 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 120-268
Cow position: chr18:28540097-28539950 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 122

Conread position: 120-274
Cow position: chr18:33757032-33757180 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 43

Conread position: 120-289
Cow position: chr18:35171363-35171530 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 132, 0

Conread position: 120-291
Cow position: chr18:10758040-10757874 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 100, 71

Conread position: 120-292
Cow position: chr18:30676644-30676468 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 82, 28

Conread position: 120-293
Cow position: chr18:4907162-4907329 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 62, 68

Conread position: 120-294
Cow position: chr18:47680529-47680696 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 120-294
Cow position: chr18:47865086-47865253 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 121-244
Cow position: chr18:42466527-42466404 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 121-271
Cow position: chr18:21143947-21143805 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 121-288
Cow position: chr18:18217292-18217124 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 121-294
Cow position: chr18:22740146-22739973 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 121-294
Cow position: chr18:23810104-23809935 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 113, 0

Conread position: 121-296
Cow position: chr18:41553355-41553177 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 122-274
Cow position: chr18:43056908-43057059 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 122-296
Cow position: chr18:37690167-37690339 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 66, 0

Conread position: 123-284
Cow position: chr18:19385975-19385814 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 123-291
Cow position: chr18:4857706-4857539 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 66, 122

Conread position: 123-293
Cow position: chr18:16760537-16760708 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 123-293
Cow position: chr18:33364230-33364396 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 46, 71

Conread position: 124-291
Cow position: chr18:42967131-42967286 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 124-295
Cow position: chr18:6825780-6825605 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 66, 134

Conread position: 124-296
Cow position: chr18:29945551-29945723 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 41, 123

Conread position: 128-274
Cow position: chr18:28810337-28810189 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 15

Conread position: 128-286
Cow position: chr18:30673413-30673261 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 128-293
Cow position: chr18:7487255-7487420 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 128-296
Cow position: chr18:51712694-51712531 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 62

Conread position: 129-291
Cow position: chr18:2553893-2553735 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 131-294
Cow position: chr18:41257895-41257731 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 132-285
Cow position: chr18:36296715-36296570 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 137-278
Cow position: chr18:35235991-35235851 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 137-289
Cow position: chr18:11814336-11814479 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 137-291
Cow position: chr18:26355013-26354858 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 140-274
Cow position: chr18:641278-641149 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 141-296
Cow position: chr18:37756429-37756584 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 143-296
Cow position: chr18:17756907-17756753 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 148-292
Cow position: chr18:20391245-20391390 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 43

Conread position: 149-270
Cow position: chr18:38669784-38669661 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 149-273
Cow position: chr18:1151901-1151782 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 150-276
Cow position: chr18:1735553-1735429 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 123, 54

Conread position: 151-270
Cow position: chr18:50095363-50095247 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 151-274
Cow position: chr18:18520755-18520635 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 65, 39

Conread position: 151-274
Cow position: chr18:35112259-35112141 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 151-294
Cow position: chr18:21410731-21410873 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 119, 36

Conread position: 152-285
Cow position: chr18:37031876-37032009 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 152-291
Cow position: chr18:32960124-32960262 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 153-296
Cow position: chr18:51398285-51398146 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 156-296
Cow position: chr18:30295555-30295421 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 158-274
Cow position: chr18:39700527-39700410 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 159-294
Cow position: chr18:52624525-52624390 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 161-272
Cow position: chr18:18956825-18956718 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 162-293
Cow position: chr18:35802413-35802282 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 19

Conread position: 163-293
Cow position: chr18:51396441-51396313 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 169-274
Cow position: chr18:18597030-18596925 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 184-291
Cow position: chr18:45941670-45941779 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 192-286
Cow position: chr18:40356860-40356766 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 197-296
Cow position: chr18:11312648-11312549 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 198-294
Cow position: chr18:20019400-20019496 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 87
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.