Cow genome map

Conread name: mCP0-MI-P-CP0-nvg-d-03-0-UI.s2

Conread position: 31-407
Cow position: chr12:36568518-36568147 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 222

Conread position: 31-648
Cow position: chr12:27563854-27563210 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 211

Conread position: 31-659
Cow position: chr12:9482749-9482122 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 78

Conread position: 33-373
Cow position: chr12:17982164-17982503 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 31

Conread position: 33-373
Cow position: chr12:37123047-37123390 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 233

Conread position: 33-373
Cow position: chr12:44766612-44766961 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 274

Conread position: 33-387
Cow position: chr12:2242358-2241991 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 279

Conread position: 33-396
Cow position: chr12:19420409-19420029 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 115

Conread position: 33-403
Cow position: chr12:28572234-28572598 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 190

Conread position: 33-407
Cow position: chr12:3039046-3039419 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 255

Conread position: 33-407
Cow position: chr12:21486132-21486498 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 23

Conread position: 33-407
Cow position: chr12:24440343-24440732 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 274

Conread position: 33-559
Cow position: chr12:15173350-15173906 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 201

Conread position: 33-563
Cow position: chr12:47928747-47929287 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 276

Conread position: 33-574
Cow position: chr12:2711019-2711593 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 277

Conread position: 33-575
Cow position: chr12:3950805-3950245 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 147

Conread position: 33-582
Cow position: chr12:7977584-7978142 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 124

Conread position: 33-605
Cow position: chr12:4008750-4008154 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 58

Conread position: 33-625
Cow position: chr12:19865773-19866390 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 273

Conread position: 33-626
Cow position: chr12:20316975-20316381 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 201

Conread position: 33-640
Cow position: chr12:30918961-30919595 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 138

Conread position: 33-648
Cow position: chr12:16359409-16360039 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 37

Conread position: 33-648
Cow position: chr12:35311143-35310513 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 263

Conread position: 33-650
Cow position: chr12:36501415-36500775 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 57

Conread position: 33-652
Cow position: chr12:26869260-26868641 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 32

Conread position: 33-652
Cow position: chr12:42966531-42967168 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 202

Conread position: 33-659
Cow position: chr12:36118503-36119148 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 57

Conread position: 33-660
Cow position: chr12:9142925-9143561 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 366

Conread position: 33-660
Cow position: chr12:15938719-15938088 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 75

Conread position: 33-662
Cow position: chr12:7885117-7884497 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 35

Conread position: 33-662
Cow position: chr12:18123219-18123852 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 200

Conread position: 33-662
Cow position: chr12:35368161-35368827 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 286

Conread position: 36-403
Cow position: chr12:2669792-2670173 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 264
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 61, 19

Conread position: 36-407
Cow position: chr12:5800566-5800946 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 205

Conread position: 36-559
Cow position: chr12:31430032-31429490 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 198

Conread position: 36-608
Cow position: chr12:11056427-11057000 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 140

Conread position: 36-659
Cow position: chr12:6469508-6468892 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 44

Conread position: 36-662
Cow position: chr12:7961028-7960404 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 199

Conread position: 36-662
Cow position: chr12:19869000-19869658 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 267

Conread position: 37-403
Cow position: chr12:18936934-18937311 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 77

Conread position: 37-581
Cow position: chr12:45160973-45160417 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 53

Conread position: 37-652
Cow position: chr12:37770406-37771033 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 293

Conread position: 38-407
Cow position: chr12:11582942-11583308 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 163

Conread position: 38-579
Cow position: chr12:1774125-1773558 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 48

Conread position: 38-662
Cow position: chr12:11835777-11836412 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 163

Conread position: 39-653
Cow position: chr12:19696943-19697568 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 430
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 40, 208

Conread position: 39-661
Cow position: chr12:40910742-40910102 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 60

Conread position: 39-662
Cow position: chr12:1890057-1889396 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 437
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 34, 281

Conread position: 46-616
Cow position: chr12:19155063-19154480 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 245

Conread position: 46-640
Cow position: chr12:17079805-17080427 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 240

Conread position: 47-657
Cow position: chr12:15089036-15089694 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 367

Conread position: 48-657
Cow position: chr12:34385954-34385351 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 115

Conread position: 51-407
Cow position: chr12:22047034-22047385 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 126

Conread position: 61-404
Cow position: chr12:29484326-29483981 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 22

Conread position: 61-553
Cow position: chr12:29969138-29969655 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 159

Conread position: 62-404
Cow position: chr12:35218841-35218494 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 79

Conread position: 63-640
Cow position: chr12:6719885-6720509 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 158

Conread position: 66-653
Cow position: chr12:30170226-30170825 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 267

Conread position: 68-659
Cow position: chr12:38010488-38009909 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 416
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 37, 249

Conread position: 76-407
Cow position: chr12:42254236-42254580 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 8

Conread position: 76-566
Cow position: chr12:7310982-7311470 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 206

Conread position: 76-648
Cow position: chr12:10461580-10462160 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 177

Conread position: 76-657
Cow position: chr12:7206029-7205449 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 7

Conread position: 77-569
Cow position: chr12:44596239-44595717 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 144

Conread position: 77-626
Cow position: chr12:31532834-31532262 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 388
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 7, 21

Conread position: 86-407
Cow position: chr12:3880668-3880339 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 271

Conread position: 92-404
Cow position: chr12:28011300-28010989 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 9

Conread position: 98-640
Cow position: chr12:21314626-21315178 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 207

Conread position: 103-407
Cow position: chr12:42181529-42181225 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 226

Conread position: 106-404
Cow position: chr12:20326387-20326684 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 47

Conread position: 106-404
Cow position: chr12:34473988-34473714 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 214
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 60, 0

Conread position: 106-407
Cow position: chr12:6240919-6241224 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 246

Conread position: 106-407
Cow position: chr12:40158624-40158325 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 117

Conread position: 106-550
Cow position: chr12:45814652-45814188 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 120

Conread position: 106-555
Cow position: chr12:30605531-30605087 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 42

Conread position: 106-581
Cow position: chr12:30753338-30753824 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 139

Conread position: 106-616
Cow position: chr12:5632262-5631747 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 192

Conread position: 106-624
Cow position: chr12:15121954-15122470 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 111

Conread position: 106-654
Cow position: chr12:31228199-31228757 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 34

Conread position: 106-658
Cow position: chr12:15429988-15429418 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 244

Conread position: 106-659
Cow position: chr12:19508957-19508384 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 245

Conread position: 109-659
Cow position: chr12:39486048-39486610 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 34

Conread position: 110-407
Cow position: chr12:6227015-6226737 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 223
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 58, 106

Conread position: 110-408
Cow position: chr12:3568566-3568859 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 93

Conread position: 110-644
Cow position: chr12:10895932-10895389 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 182

Conread position: 112-398
Cow position: chr12:7919684-7919952 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 220
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 27, 116

Conread position: 112-647
Cow position: chr12:22516118-22515568 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 114

Conread position: 115-655
Cow position: chr12:25560992-25561544 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 95

Conread position: 117-638
Cow position: chr12:21393321-21393869 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 188

Conread position: 126-551
Cow position: chr12:47803787-47804231 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 315
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 42, 100

Conread position: 126-574
Cow position: chr12:41580749-41581209 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 100

Conread position: 127-640
Cow position: chr12:17881505-17882016 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 122

Conread position: 134-626
Cow position: chr12:17270191-17270684 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 39

Conread position: 156-405
Cow position: chr12:941300-941548 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 46

Conread position: 157-640
Cow position: chr12:44622027-44622521 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 119

Conread position: 157-653
Cow position: chr12:34466325-34465844 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 322
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 140, 14

Conread position: 158-540
Cow position: chr12:44905309-44905691 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 60

Conread position: 164-380
Cow position: chr12:12976508-12976291 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 174
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 100, 182

Conread position: 164-449
Cow position: chr12:9465782-9465499 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 56

Conread position: 164-640
Cow position: chr12:4342043-4341574 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 129

Conread position: 164-644
Cow position: chr12:18577524-18577992 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 58

Conread position: 164-647
Cow position: chr12:9710527-9710037 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 105

Conread position: 164-647
Cow position: chr12:12199227-12198740 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 54

Conread position: 164-651
Cow position: chr12:34148673-34148165 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 111

Conread position: 165-393
Cow position: chr12:1245973-1246200 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 181
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 105, 154

Conread position: 165-408
Cow position: chr12:22261135-22260910 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 185
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 63, 98

Conread position: 165-436
Cow position: chr12:46143501-46143764 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 166-608
Cow position: chr12:33323818-33323365 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 52

Conread position: 166-640
Cow position: chr12:35771352-35770863 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 5

Conread position: 168-647
Cow position: chr12:43788712-43789194 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 180

Conread position: 169-540
Cow position: chr12:29995779-29995400 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 136

Conread position: 171-407
Cow position: chr12:12017559-12017791 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 125

Conread position: 171-657
Cow position: chr12:30745398-30745894 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 115

Conread position: 171-657
Cow position: chr12:31529977-31530476 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 57

Conread position: 171-662
Cow position: chr12:26782566-26783057 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 175

Conread position: 175-639
Cow position: chr12:30805543-30806013 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 117

Conread position: 175-659
Cow position: chr12:30728551-30728063 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 174

Conread position: 176-640
Cow position: chr12:18518361-18518833 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 400

Conread position: 177-622
Cow position: chr12:18076225-18076655 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 105

Conread position: 178-640
Cow position: chr12:3076931-3076459 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 168

Conread position: 179-403
Cow position: chr12:33457843-33458054 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 179-658
Cow position: chr12:41083761-41084225 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 13

Conread position: 180-389
Cow position: chr12:36954681-36954479 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 180-404
Cow position: chr12:37727841-37728050 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 7

Conread position: 180-407
Cow position: chr12:28650651-28650868 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 180-540
Cow position: chr12:8869188-8868818 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 18

Conread position: 180-602
Cow position: chr12:41473788-41474214 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 298
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 9, 103

Conread position: 180-640
Cow position: chr12:20479618-20479183 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 324
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 216, 40

Conread position: 180-650
Cow position: chr12:8943528-8943046 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 78

Conread position: 180-661
Cow position: chr12:30590471-30590951 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 38

Conread position: 181-404
Cow position: chr12:25455809-25456029 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 181-541
Cow position: chr12:40110081-40110437 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 257
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 10, 99

Conread position: 181-640
Cow position: chr12:17031316-17031770 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 90

Conread position: 181-653
Cow position: chr12:48415816-48415346 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 38

Conread position: 181-654
Cow position: chr12:41159292-41159757 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 37

Conread position: 183-608
Cow position: chr12:4866513-4866943 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 36

Conread position: 183-640
Cow position: chr12:6411031-6410575 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 107

Conread position: 184-404
Cow position: chr12:3956077-3955862 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 153, 71

Conread position: 185-402
Cow position: chr12:1284759-1284551 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 107, 0

Conread position: 185-554
Cow position: chr12:9229783-9229422 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 114

Conread position: 185-574
Cow position: chr12:7000890-7000507 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 282
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 210, 33

Conread position: 185-625
Cow position: chr12:37994026-37993576 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 33

Conread position: 185-662
Cow position: chr12:42160854-42160373 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 25

Conread position: 186-373
Cow position: chr12:8922089-8921904 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 154
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 12, 17

Conread position: 186-400
Cow position: chr12:1848838-1848628 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 160, 0

Conread position: 186-436
Cow position: chr12:1444048-1443800 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 161, 0

Conread position: 187-407
Cow position: chr12:32391546-32391762 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 172
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 160, 95

Conread position: 188-636
Cow position: chr12:34007001-34007456 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 186

Conread position: 191-640
Cow position: chr12:25805405-25804984 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 27

Conread position: 192-401
Cow position: chr12:3510271-3510474 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 166
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 28, 0

Conread position: 192-407
Cow position: chr12:19715321-19715127 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 192-407
Cow position: chr12:40270380-40270179 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 170
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 72, 0

Conread position: 192-502
Cow position: chr12:3055842-3056159 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 247
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 24, 155

Conread position: 192-550
Cow position: chr12:5905763-5906130 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 262
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 212, 81

Conread position: 192-585
Cow position: chr12:9914495-9914900 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 93

Conread position: 192-640
Cow position: chr12:20777223-20776768 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 27

Conread position: 193-622
Cow position: chr12:41091236-41091678 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 153

Conread position: 193-640
Cow position: chr12:5714336-5714779 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 25

Conread position: 193-662
Cow position: chr12:16605939-16605487 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 86

Conread position: 194-396
Cow position: chr12:12983162-12982967 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 194-575
Cow position: chr12:11109478-11109853 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 14

Conread position: 194-662
Cow position: chr12:18040883-18040422 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 9

Conread position: 195-401
Cow position: chr12:23379283-23379484 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 139
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 195-629
Cow position: chr12:9771680-9772120 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 147

Conread position: 195-636
Cow position: chr12:32169245-32169703 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 7

Conread position: 196-407
Cow position: chr12:4134375-4134584 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 56, 22

Conread position: 196-653
Cow position: chr12:15358038-15358517 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 146

Conread position: 199-398
Cow position: chr12:12178634-12178826 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 199-435
Cow position: chr12:37733064-37732844 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 199-499
Cow position: chr12:23154753-23154455 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 19

Conread position: 199-577
Cow position: chr12:28257342-28256954 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 56

Conread position: 201-405
Cow position: chr12:41214603-41214413 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 158
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 17, 0

Conread position: 201-648
Cow position: chr12:3473275-3472825 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 94

Conread position: 201-649
Cow position: chr12:22285385-22284952 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 17

Conread position: 202-639
Cow position: chr12:19502704-19502254 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 187

Conread position: 204-617
Cow position: chr12:42698506-42698095 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 95

Conread position: 205-571
Cow position: chr12:25320642-25321009 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 99

Conread position: 206-624
Cow position: chr12:27563117-27562692 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 84

Conread position: 208-407
Cow position: chr12:12700053-12699852 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 122, 96

Conread position: 209-402
Cow position: chr12:44846116-44846297 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 209-573
Cow position: chr12:29780179-29779818 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 83

Conread position: 209-647
Cow position: chr12:34332829-34333284 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 52

Conread position: 209-661
Cow position: chr12:15783656-15784106 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 316
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 197, 93

Conread position: 210-608
Cow position: chr12:30662226-30661820 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 81

Conread position: 213-636
Cow position: chr12:42879433-42879856 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 282
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 84, 64

Conread position: 215-403
Cow position: chr12:31841165-31841351 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 149
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 15, 129

Conread position: 216-559
Cow position: chr12:25177864-25177515 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 132

Conread position: 217-655
Cow position: chr12:42283106-42282663 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 63

Conread position: 223-402
Cow position: chr12:28804730-28804904 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 123, 0

Conread position: 223-662
Cow position: chr12:3994686-3995117 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 123

Conread position: 224-401
Cow position: chr12:29162073-29161906 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 142
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 78, 0

Conread position: 225-404
Cow position: chr12:4182957-4182780 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 149
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 56, 118

Conread position: 226-407
Cow position: chr12:46673489-46673317 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 226-547
Cow position: chr12:5940083-5940412 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 116

Conread position: 226-636
Cow position: chr12:5635708-5635295 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 78

Conread position: 229-403
Cow position: chr12:40029012-40028848 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 229-512
Cow position: chr12:15240981-15240702 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 207
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 160, 61

Conread position: 231-362
Cow position: chr12:9514258-9514130 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 232-651
Cow position: chr12:24024045-24023639 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 297
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 157, 21

Conread position: 233-555
Cow position: chr12:23797850-23798178 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 232
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 59, 106

Conread position: 233-643
Cow position: chr12:35780180-35779756 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 108

Conread position: 234-403
Cow position: chr12:28213266-28213426 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 237-407
Cow position: chr12:1093023-1092851 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 116, 53

Conread position: 238-631
Cow position: chr12:42954143-42953745 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 269
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 7, 63

Conread position: 241-571
Cow position: chr12:27037693-27037355 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 237
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 135, 17

Conread position: 244-626
Cow position: chr12:23574528-23574917 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 272
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 132, 48

Conread position: 245-403
Cow position: chr12:20357202-20357045 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 245-403
Cow position: chr12:24180656-24180806 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 129
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 87, 52

Conread position: 246-525
Cow position: chr12:6275344-6275051 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 205
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 121, 97

Conread position: 246-535
Cow position: chr12:42412460-42412163 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 156, 72

Conread position: 246-585
Cow position: chr12:18766221-18765865 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 163, 65

Conread position: 246-613
Cow position: chr12:22287038-22287410 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 258
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 11, 40

Conread position: 246-654
Cow position: chr12:15162909-15163331 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 45

Conread position: 247-535
Cow position: chr12:5658315-5658017 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 213
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 159, 99

Conread position: 248-407
Cow position: chr12:30476239-30476395 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 128
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 94, 0

Conread position: 251-399
Cow position: chr12:13996270-13996116 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 125
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 84, 0

Conread position: 251-404
Cow position: chr12:4162606-4162457 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 251-640
Cow position: chr12:5459028-5459411 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 39

Conread position: 252-657
Cow position: chr12:4093989-4093591 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 282
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 52, 102

Conread position: 253-404
Cow position: chr12:38512075-38511928 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 125
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 87, 39

Conread position: 253-640
Cow position: chr12:20071818-20071408 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 281
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 44, 35

Conread position: 253-651
Cow position: chr12:29899670-29899246 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 290
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 85, 95

Conread position: 255-512
Cow position: chr12:12579256-12578997 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 154, 39

Conread position: 255-656
Cow position: chr12:24662884-24663293 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 45

Conread position: 257-404
Cow position: chr12:25820662-25820520 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 125
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 47, 0

Conread position: 257-512
Cow position: chr12:3906239-3906509 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 152, 86

Conread position: 258-407
Cow position: chr12:15768183-15768324 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 258-616
Cow position: chr12:28748706-28749081 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 64

Conread position: 259-602
Cow position: chr12:15763137-15762788 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 244
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 143, 31

Conread position: 259-662
Cow position: chr12:18103821-18103434 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 53

Conread position: 260-396
Cow position: chr12:16310203-16310338 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 86, 0

Conread position: 261-407
Cow position: chr12:18021368-18021508 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 121
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 261-407
Cow position: chr12:44559361-44559502 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 261-640
Cow position: chr12:4596224-4596634 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 264-654
Cow position: chr12:10575376-10575777 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 280
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 18, 47

Conread position: 265-656
Cow position: chr12:31947902-31948289 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 25

Conread position: 265-661
Cow position: chr12:33129043-33129436 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 69

Conread position: 266-559
Cow position: chr12:17636410-17636699 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 213
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 134, 75

Conread position: 266-640
Cow position: chr12:30210258-30210631 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 270
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 134, 75

Conread position: 270-574
Cow position: chr12:25444701-25445011 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 225
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 37, 53

Conread position: 270-616
Cow position: chr12:25917483-25917139 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 238
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 109, 71

Conread position: 273-552
Cow position: chr12:45680054-45680353 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 216
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 62, 0

Conread position: 273-661
Cow position: chr12:33851142-33851535 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 189

Conread position: 274-402
Cow position: chr12:42477537-42477662 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 275-660
Cow position: chr12:10942101-10942475 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 50

Conread position: 277-402
Cow position: chr12:6121141-6121268 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 277-626
Cow position: chr12:19401017-19400669 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 225
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 71, 152

Conread position: 277-634
Cow position: chr12:4085707-4086058 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 240
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 166, 60

Conread position: 281-640
Cow position: chr12:36544858-36544483 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 257
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 54, 277

Conread position: 284-640
Cow position: chr12:33975998-33976364 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 5

Conread position: 289-407
Cow position: chr12:31882147-31882260 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 289-641
Cow position: chr12:35099331-35099685 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 238
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 117, 53

Conread position: 291-404
Cow position: chr12:32334207-32334097 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 291-662
Cow position: chr12:25280692-25280319 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 137

Conread position: 292-660
Cow position: chr12:7299666-7299279 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 268
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 56, 280

Conread position: 294-547
Cow position: chr12:23855638-23855903 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 52

Conread position: 296-662
Cow position: chr12:29017731-29018108 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 256
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 82, 52

Conread position: 298-653
Cow position: chr12:28131392-28131765 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 259
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 86, 44

Conread position: 299-649
Cow position: chr12:11587576-11587939 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 262
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 41, 52

Conread position: 300-407
Cow position: chr12:7191452-7191348 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 300-657
Cow position: chr12:1998989-1998619 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 254
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 98, 5

Conread position: 307-662
Cow position: chr12:12165475-12165837 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 244
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 15, 40

Conread position: 308-649
Cow position: chr12:38774422-38774075 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 34

Conread position: 308-661
Cow position: chr12:30804158-30803796 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 246
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 105, 38

Conread position: 310-649
Cow position: chr12:32051329-32051690 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 252
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 7, 37

Conread position: 311-655
Cow position: chr12:23446536-23446892 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 258
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 31, 166

Conread position: 312-620
Cow position: chr12:35123714-35124033 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 234
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 89, 34

Conread position: 316-581
Cow position: chr12:42174240-42174519 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 34

Conread position: 318-662
Cow position: chr12:6242348-6241991 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 243
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 88, 26

Conread position: 324-634
Cow position: chr12:22485647-22485968 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 214
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 26, 62

Conread position: 330-660
Cow position: chr12:6102990-6102645 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 231
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 65, 16

Conread position: 333-591
Cow position: chr12:3599912-3599651 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 73, 14

Conread position: 335-636
Cow position: chr12:24639496-24639785 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 203
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 75, 11

Conread position: 335-658
Cow position: chr12:33298031-33298363 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 229
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 65, 27

Conread position: 337-651
Cow position: chr12:37255890-37256190 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 215
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 226, 9

Conread position: 337-653
Cow position: chr12:37170099-37169775 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 233
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 67, 11

Conread position: 338-634
Cow position: chr12:28210421-28210122 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 207
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 80, 9

Conread position: 338-640
Cow position: chr12:36790967-36790652 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 214
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 66, 243

Conread position: 338-658
Cow position: chr12:12300765-12301107 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 227
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 68, 0

Conread position: 338-662
Cow position: chr12:13988216-13988557 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 239
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 71, 8

Conread position: 347-648
Cow position: chr12:9065422-9065728 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 207
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 9, 0

Conread position: 347-660
Cow position: chr12:6188245-6187928 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 45

Conread position: 350-655
Cow position: chr12:7110056-7110383 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 225
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 60, 315

Conread position: 352-662
Cow position: chr12:29675279-29674957 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 223
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 58, 28

Conread position: 358-641
Cow position: chr12:38220119-38220401 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 48, 94

Conread position: 360-659
Cow position: chr12:3454557-3454877 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 223
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 38, 21

Conread position: 368-658
Cow position: chr12:42924222-42923932 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 193
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 38, 23

Conread position: 370-659
Cow position: chr12:6218972-6219267 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 191
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 221

Conread position: 374-659
Cow position: chr12:23916742-23917019 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 18, 96

Conread position: 398-569
Cow position: chr12:4797222-4797392 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 151, 0

Conread position: 398-640
Cow position: chr12:15495820-15496058 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 61, 184

Conread position: 398-662
Cow position: chr12:31269076-31269342 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 27, 35

Conread position: 402-662
Cow position: chr12:34029201-34028942 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 174
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 131, 0

Conread position: 403-658
Cow position: chr12:33495160-33495414 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 166
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 142, 0

Conread position: 403-662
Cow position: chr12:12232808-12233064 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 13, 71

Conread position: 404-632
Cow position: chr12:23939149-23939372 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 5, 101

Conread position: 404-636
Cow position: chr12:15414945-15414714 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 157

Conread position: 404-636
Cow position: chr12:40158093-40157871 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 10, 0

Conread position: 404-644
Cow position: chr12:26217898-26217662 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 147

Conread position: 404-653
Cow position: chr12:15103194-15103453 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 9, 0

Conread position: 404-654
Cow position: chr12:16493434-16493180 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 53, 10

Conread position: 404-657
Cow position: chr12:40881981-40881743 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 233, 9

Conread position: 404-658
Cow position: chr12:24152263-24152521 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 12, 150

Conread position: 404-658
Cow position: chr12:25343708-25343963 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 9, 0

Conread position: 404-660
Cow position: chr12:18563091-18563343 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 149, 0

Conread position: 404-660
Cow position: chr12:21780090-21780352 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 230, 145

Conread position: 404-661
Cow position: chr12:40360616-40360873 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 173
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 145, 6

Conread position: 404-662
Cow position: chr12:12531148-12530893 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 405-587
Cow position: chr12:7457612-7457434 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 9, 0

Conread position: 405-636
Cow position: chr12:37008773-37008553 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 405-653
Cow position: chr12:18583063-18582824 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 118, 77

Conread position: 405-657
Cow position: chr12:37514353-37514103 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 7, 133

Conread position: 405-659
Cow position: chr12:42784238-42784487 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 171
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 72, 155

Conread position: 406-637
Cow position: chr12:37701453-37701689 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 406-640
Cow position: chr12:6687824-6688046 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 212, 7

Conread position: 406-640
Cow position: chr12:11525664-11525430 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 406-647
Cow position: chr12:33625477-33625235 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 406-649
Cow position: chr12:10827716-10827956 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 12, 0

Conread position: 406-651
Cow position: chr12:11700954-11700705 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 11

Conread position: 406-654
Cow position: chr12:29057317-29057565 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 18, 143

Conread position: 406-655
Cow position: chr12:42285899-42286139 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 158

Conread position: 406-659
Cow position: chr12:12144766-12144506 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 173
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 79, 67

Conread position: 406-659
Cow position: chr12:13911653-13911394 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 165

Conread position: 406-659
Cow position: chr12:17479111-17478858 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 142, 7

Conread position: 406-659
Cow position: chr12:42181200-42180947 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 6, 152

Conread position: 406-662
Cow position: chr12:9800559-9800300 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 78, 67

Conread position: 407-624
Cow position: chr12:47267378-47267163 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 146
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 141, 0

Conread position: 407-636
Cow position: chr12:3623625-3623848 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 150, 0

Conread position: 407-640
Cow position: chr12:27894840-27894609 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 74, 0

Conread position: 407-646
Cow position: chr12:30946674-30946913 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 22, 15

Conread position: 407-648
Cow position: chr12:20404077-20404320 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 23, 0

Conread position: 407-648
Cow position: chr12:42631107-42630866 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 157
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 407-648
Cow position: chr12:43560215-43559973 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 158
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 57

Conread position: 407-658
Cow position: chr12:3371922-3371675 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 174
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 196, 66

Conread position: 407-659
Cow position: chr12:17786716-17786463 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 165
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 202

Conread position: 407-659
Cow position: chr12:27192440-27192186 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 6, 188

Conread position: 407-660
Cow position: chr12:17269733-17269984 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 218, 138

Conread position: 407-661
Cow position: chr12:42749372-42749625 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 186
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 134, 7

Conread position: 407-662
Cow position: chr12:5554405-5554154 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 22

Conread position: 407-662
Cow position: chr12:38126593-38126337 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 232, 0

Conread position: 408-637
Cow position: chr12:33948836-33949058 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 149, 0

Conread position: 408-656
Cow position: chr12:45092378-45092617 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 197, 148

Conread position: 408-659
Cow position: chr12:42286816-42286561 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 176
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 63

Conread position: 408-661
Cow position: chr12:40200633-40200877 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 66, 0

Conread position: 408-662
Cow position: chr12:11977615-11977872 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 409-657
Cow position: chr12:16056925-16056677 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 409-660
Cow position: chr12:9129842-9130084 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 89, 0

Conread position: 409-660
Cow position: chr12:45990051-45989805 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 167
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 135, 80

Conread position: 409-662
Cow position: chr12:46122596-46122848 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 162
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 410-613
Cow position: chr12:4510308-4510105 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 136
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 8, 77

Conread position: 410-619
Cow position: chr12:32753447-32753660 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 136, 0

Conread position: 410-627
Cow position: chr12:9514295-9514516 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 180, 0

Conread position: 410-631
Cow position: chr12:26777255-26777042 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 410-640
Cow position: chr12:45168085-45167847 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 145, 121

Conread position: 410-648
Cow position: chr12:19261129-19261364 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 158, 0

Conread position: 410-651
Cow position: chr12:17879367-17879133 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 94, 0

Conread position: 410-652
Cow position: chr12:3371608-3371375 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 162
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 410-654
Cow position: chr12:22291552-22291314 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 75, 57

Conread position: 410-655
Cow position: chr12:14222916-14223159 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 22, 0

Conread position: 410-655
Cow position: chr12:15703563-15703323 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 144, 69

Conread position: 410-656
Cow position: chr12:12637249-12637008 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 117, 0

Conread position: 410-656
Cow position: chr12:17252264-17252026 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 55, 0

Conread position: 410-656
Cow position: chr12:26750019-26749774 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 19, 33

Conread position: 410-658
Cow position: chr12:9766943-9766702 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 145, 0

Conread position: 410-659
Cow position: chr12:6206267-6206514 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 117, 36

Conread position: 410-660
Cow position: chr12:24032430-24032668 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 143, 0

Conread position: 410-661
Cow position: chr12:4719881-4720126 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 145, 0

Conread position: 410-661
Cow position: chr12:5839722-5839479 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 109, 149

Conread position: 411-573
Cow position: chr12:15260698-15260854 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 118, 0

Conread position: 411-640
Cow position: chr12:4594436-4594660 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 22, 13

Conread position: 411-640
Cow position: chr12:31883275-31883507 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 157
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 137, 35

Conread position: 411-649
Cow position: chr12:15050681-15050455 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 60, 0

Conread position: 411-649
Cow position: chr12:42685010-42684765 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 49

Conread position: 411-650
Cow position: chr12:24273424-24273201 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 86, 62

Conread position: 411-652
Cow position: chr12:28699851-28699604 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 8

Conread position: 411-653
Cow position: chr12:25027832-25027583 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 154

Conread position: 411-653
Cow position: chr12:45002132-45001894 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 226, 125

Conread position: 411-655
Cow position: chr12:7902870-7902626 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 136

Conread position: 411-656
Cow position: chr12:11659863-11660106 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 181, 88

Conread position: 411-657
Cow position: chr12:16670202-16670444 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 117, 0

Conread position: 411-658
Cow position: chr12:13813938-13814183 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 165
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 76, 60

Conread position: 412-584
Cow position: chr12:16341829-16342003 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 147, 103

Conread position: 412-639
Cow position: chr12:18513992-18513766 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 98, 31

Conread position: 412-639
Cow position: chr12:24167008-24166789 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 13, 21

Conread position: 413-626
Cow position: chr12:25809366-25809581 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 161, 189

Conread position: 413-632
Cow position: chr12:15389008-15389223 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 140, 0

Conread position: 413-660
Cow position: chr12:43783038-43782788 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 98, 181

Conread position: 413-662
Cow position: chr12:39746343-39746594 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 206, 111

Conread position: 413-662
Cow position: chr12:45039044-45039290 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 44, 147

Conread position: 414-641
Cow position: chr12:36261627-36261856 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 134, 0

Conread position: 414-656
Cow position: chr12:25192988-25193219 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 225, 84

Conread position: 414-659
Cow position: chr12:38216095-38215846 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 43, 139

Conread position: 414-662
Cow position: chr12:38155133-38154885 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 415-648
Cow position: chr12:4193767-4194004 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 147, 204

Conread position: 415-658
Cow position: chr12:4954764-4955001 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 10, 106

Conread position: 418-636
Cow position: chr12:26575838-26576049 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 123, 0

Conread position: 419-656
Cow position: chr12:43974236-43974469 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 50, 0

Conread position: 421-574
Cow position: chr12:7920187-7920338 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 422-610
Cow position: chr12:21389818-21390005 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 422-636
Cow position: chr12:26147224-26147011 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 139, 0

Conread position: 422-662
Cow position: chr12:41801872-41802113 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 160
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 425-624
Cow position: chr12:12532542-12532346 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 106, 0

Conread position: 426-662
Cow position: chr12:12166501-12166266 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 428-588
Cow position: chr12:25355802-25355644 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 428-622
Cow position: chr12:8153138-8153332 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 428-653
Cow position: chr12:2734956-2734738 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 133, 0

Conread position: 428-655
Cow position: chr12:35241153-35240925 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 208, 112

Conread position: 429-638
Cow position: chr12:43854847-43855049 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 44, 0

Conread position: 429-640
Cow position: chr12:24437682-24437471 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 144
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 432-640
Cow position: chr12:14986705-14986908 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 108, 0

Conread position: 432-640
Cow position: chr12:48578799-48578996 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 109, 0

Conread position: 432-655
Cow position: chr12:35469491-35469275 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 108, 0

Conread position: 432-657
Cow position: chr12:26356755-26356529 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 207, 0

Conread position: 432-662
Cow position: chr12:23105893-23106125 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 206, 137

Conread position: 433-658
Cow position: chr12:27385447-27385667 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 200, 70

Conread position: 435-630
Cow position: chr12:44542225-44542414 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 435-661
Cow position: chr12:25823268-25823045 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 202, 49

Conread position: 439-595
Cow position: chr12:46634708-46634553 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 103, 0

Conread position: 439-657
Cow position: chr12:37480872-37480659 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 54, 0

Conread position: 440-662
Cow position: chr12:29195259-29195479 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 131, 0

Conread position: 442-634
Cow position: chr12:46144019-46144208 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 8, 15

Conread position: 442-650
Cow position: chr12:34533108-34532901 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 33, 98

Conread position: 442-650
Cow position: chr12:44022386-44022591 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 196, 77

Conread position: 442-655
Cow position: chr12:32374558-32374774 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 106

Conread position: 442-657
Cow position: chr12:30476470-30476690 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 442-658
Cow position: chr12:29944982-29944759 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 87, 0

Conread position: 442-662
Cow position: chr12:43551256-43551033 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 80, 0

Conread position: 443-640
Cow position: chr12:37945976-37945785 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 443-642
Cow position: chr12:29316495-29316299 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 76, 143

Conread position: 443-647
Cow position: chr12:29731281-29731479 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 111, 0

Conread position: 443-651
Cow position: chr12:41776065-41776268 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 38

Conread position: 443-653
Cow position: chr12:6480607-6480815 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 127, 104

Conread position: 443-657
Cow position: chr12:26357404-26357189 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 133, 104

Conread position: 443-662
Cow position: chr12:23714642-23714854 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 114, 0

Conread position: 446-639
Cow position: chr12:3057055-3057249 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 15, 105

Conread position: 447-601
Cow position: chr12:42254638-42254791 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 102, 0

Conread position: 447-612
Cow position: chr12:18996781-18996944 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 447-636
Cow position: chr12:31841540-31841727 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 110, 0

Conread position: 447-638
Cow position: chr12:20355186-20355382 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 106, 0

Conread position: 447-652
Cow position: chr12:16386486-16386282 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 192, 116

Conread position: 447-655
Cow position: chr12:30937042-30936839 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 447-655
Cow position: chr12:46064833-46065040 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 84

Conread position: 447-656
Cow position: chr12:11230204-11230417 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 447-659
Cow position: chr12:20207807-20208021 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 447-659
Cow position: chr12:24397192-24396985 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 50, 0

Conread position: 447-660
Cow position: chr12:27430477-27430702 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 447-661
Cow position: chr12:6958190-6958401 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 86, 111

Conread position: 447-662
Cow position: chr12:25456379-25456604 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 449-661
Cow position: chr12:45782199-45782405 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 110, 0

Conread position: 451-639
Cow position: chr12:4512475-4512291 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 98, 0

Conread position: 451-653
Cow position: chr12:20439282-20439085 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 177, 105

Conread position: 451-662
Cow position: chr12:35663938-35664143 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 186, 76

Conread position: 452-606
Cow position: chr12:8483202-8483046 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 87, 11

Conread position: 454-650
Cow position: chr12:17490195-17490388 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 185, 9

Conread position: 456-657
Cow position: chr12:42492575-42492375 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 103, 30

Conread position: 458-640
Cow position: chr12:26234181-26234003 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 136

Conread position: 458-662
Cow position: chr12:4182305-4182106 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 458-662
Cow position: chr12:31602840-31602639 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 102, 0

Conread position: 460-660
Cow position: chr12:3526384-3526584 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 462-662
Cow position: chr12:38679035-38679230 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 95, 0

Conread position: 463-610
Cow position: chr12:15990752-15990606 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 463-619
Cow position: chr12:11106594-11106437 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 152, 0

Conread position: 463-626
Cow position: chr12:38552181-38552340 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 463-626
Cow position: chr12:42944121-42944284 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 463-648
Cow position: chr12:31925839-31926024 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 463-648
Cow position: chr12:37123637-37123821 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 83, 0

Conread position: 463-652
Cow position: chr12:25528573-25528386 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 68, 74

Conread position: 463-656
Cow position: chr12:9866777-9866584 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 463-658
Cow position: chr12:30042712-30042907 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 463-659
Cow position: chr12:6121583-6121776 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 148, 0

Conread position: 463-660
Cow position: chr12:43474747-43474939 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 99, 0

Conread position: 463-662
Cow position: chr12:18578845-18578643 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 89, 34

Conread position: 464-636
Cow position: chr12:44861272-44861100 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 464-636
Cow position: chr12:45152280-45152449 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 464-659
Cow position: chr12:43427814-43427619 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 134
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 464-662
Cow position: chr12:583522-583321 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 89, 0

Conread position: 466-640
Cow position: chr12:29180665-29180835 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 472-611
Cow position: chr12:11068414-11068546 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 472-650
Cow position: chr12:47044445-47044269 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 159, 9

Conread position: 472-662
Cow position: chr12:11583705-11583905 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 86, 147

Conread position: 473-624
Cow position: chr12:41221012-41220868 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 473-640
Cow position: chr12:4008090-4007922 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 108

Conread position: 473-640
Cow position: chr12:19272692-19272529 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 473-650
Cow position: chr12:3891986-3892159 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 473-653
Cow position: chr12:14987796-14987974 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 64

Conread position: 473-658
Cow position: chr12:8842301-8842116 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 473-660
Cow position: chr12:17254138-17254326 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 90

Conread position: 473-660
Cow position: chr12:22323277-22323086 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 101, 0

Conread position: 473-660
Cow position: chr12:28418132-28418318 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 473-660
Cow position: chr12:39150055-39149868 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 146
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 473-661
Cow position: chr12:41684504-41684686 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 88, 0

Conread position: 473-662
Cow position: chr12:11272829-11272646 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 474-640
Cow position: chr12:43619278-43619444 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 45, 137

Conread position: 474-648
Cow position: chr12:35136916-35137090 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 474-652
Cow position: chr12:18561534-18561712 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 82, 71

Conread position: 474-655
Cow position: chr12:1089395-1089214 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 42, 18

Conread position: 474-655
Cow position: chr12:22047919-22048101 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 147
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 171, 0

Conread position: 474-655
Cow position: chr12:41251301-41251122 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 86

Conread position: 474-657
Cow position: chr12:45136601-45136783 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 70, 54

Conread position: 474-660
Cow position: chr12:34877828-34878019 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 73, 0

Conread position: 474-662
Cow position: chr12:4014435-4014238 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 475-640
Cow position: chr12:2964046-2964207 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 88, 0

Conread position: 475-658
Cow position: chr12:12699642-12699458 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 164, 0

Conread position: 476-644
Cow position: chr12:6426896-6427064 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 120, 12

Conread position: 476-657
Cow position: chr12:38032140-38031965 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 85, 0

Conread position: 479-635
Cow position: chr12:29762247-29762087 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 69, 0

Conread position: 479-636
Cow position: chr12:25814156-25814314 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 106, 0

Conread position: 479-647
Cow position: chr12:1952799-1952637 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 479-662
Cow position: chr12:20356806-20356627 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 159, 127

Conread position: 480-636
Cow position: chr12:10593769-10593921 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 122, 0

Conread position: 480-647
Cow position: chr12:44013593-44013421 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 120

Conread position: 480-649
Cow position: chr12:42561905-42562067 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 480-655
Cow position: chr12:42951684-42951515 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 75, 0

Conread position: 481-639
Cow position: chr12:41420861-41420699 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 481-643
Cow position: chr12:1443598-1443438 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 154, 34

Conread position: 481-643
Cow position: chr12:15060453-15060291 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 481-644
Cow position: chr12:16107404-16107568 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 481-652
Cow position: chr12:24532620-24532449 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 481-655
Cow position: chr12:31276609-31276787 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 66, 159

Conread position: 481-656
Cow position: chr12:18413499-18413334 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 481-658
Cow position: chr12:14396780-14396612 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 481-658
Cow position: chr12:41989680-41989500 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 72, 0

Conread position: 481-660
Cow position: chr12:6915229-6915408 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 481-661
Cow position: chr12:37702975-37702799 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 152, 66

Conread position: 481-661
Cow position: chr12:40043016-40043192 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 164, 76

Conread position: 482-635
Cow position: chr12:43961505-43961658 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 483-626
Cow position: chr12:36241379-36241240 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 483-659
Cow position: chr12:11857636-11857457 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 131, 0

Conread position: 483-660
Cow position: chr12:2835410-2835586 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 84, 46

Conread position: 485-658
Cow position: chr12:16006911-16007092 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 120, 0

Conread position: 486-640
Cow position: chr12:6698812-6698966 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 109
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 486-640
Cow position: chr12:19061497-19061346 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 149, 59

Conread position: 486-640
Cow position: chr12:28010663-28010510 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 486-648
Cow position: chr12:38002134-38002307 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 43

Conread position: 486-655
Cow position: chr12:13995788-13995618 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 142
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 100, 0

Conread position: 486-656
Cow position: chr12:4109053-4109223 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 486-656
Cow position: chr12:9866225-9866051 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 486-658
Cow position: chr12:16293295-16293468 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 158, 0

Conread position: 486-659
Cow position: chr12:18978697-18978865 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 69, 92

Conread position: 486-659
Cow position: chr12:39282695-39282522 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 487-640
Cow position: chr12:17108169-17108315 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 487-653
Cow position: chr12:7147717-7147883 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 72, 152

Conread position: 487-656
Cow position: chr12:45207449-45207620 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 487-661
Cow position: chr12:3849044-3848864 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 138, 14

Conread position: 487-662
Cow position: chr12:8710994-8711165 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 488-648
Cow position: chr12:37742310-37742468 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 153, 0

Conread position: 488-649
Cow position: chr12:40435031-40434873 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 488-658
Cow position: chr12:46106800-46106968 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 76, 7

Conread position: 488-661
Cow position: chr12:37718759-37718587 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 154, 0

Conread position: 488-662
Cow position: chr12:4865072-4865242 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 489-625
Cow position: chr12:29358050-29357919 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 489-627
Cow position: chr12:43351947-43352085 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 489-634
Cow position: chr12:10834120-10833976 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 141, 89

Conread position: 489-640
Cow position: chr12:44892220-44892370 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 489-651
Cow position: chr12:25819688-25819530 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 489-651
Cow position: chr12:32808600-32808444 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 489-655
Cow position: chr12:27663980-27663814 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 489-660
Cow position: chr12:34927551-34927382 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 86, 25

Conread position: 490-650
Cow position: chr12:24533802-24533643 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 105, 65

Conread position: 491-631
Cow position: chr12:10456152-10456294 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 491-662
Cow position: chr12:5246925-5247096 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 140, 64

Conread position: 494-655
Cow position: chr12:20637518-20637363 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 494-659
Cow position: chr12:39738281-39738117 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 495-650
Cow position: chr12:37420487-37420332 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 496-660
Cow position: chr12:4783153-4782985 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 498-657
Cow position: chr12:9055397-9055238 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 499-637
Cow position: chr12:25299382-25299519 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 91, 0

Conread position: 499-662
Cow position: chr12:5344106-5343944 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 112

Conread position: 499-662
Cow position: chr12:14360665-14360828 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 139, 87

Conread position: 500-640
Cow position: chr12:39320412-39320551 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 500-640
Cow position: chr12:41317089-41316949 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 500-660
Cow position: chr12:43930773-43930932 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 113
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 503-640
Cow position: chr12:8481816-8481683 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 504-655
Cow position: chr12:42575623-42575473 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 92, 102

Conread position: 506-655
Cow position: chr12:38196219-38196363 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 135, 42

Conread position: 508-662
Cow position: chr12:6719419-6719573 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 124
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 509-640
Cow position: chr12:29289818-29289948 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 509-650
Cow position: chr12:17331900-17332045 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 511-661
Cow position: chr12:42833533-42833384 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 127, 121

Conread position: 514-655
Cow position: chr12:7049857-7049995 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 515-656
Cow position: chr12:44576276-44576419 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 516-660
Cow position: chr12:44421861-44422004 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 40

Conread position: 516-661
Cow position: chr12:11167906-11168049 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 517-650
Cow position: chr12:3579525-3579654 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 111
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 520-656
Cow position: chr12:44211196-44211332 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 520-661
Cow position: chr12:6278488-6278353 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 522-640
Cow position: chr12:11676379-11676497 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 522-654
Cow position: chr12:19664278-19664145 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 524-636
Cow position: chr12:5657979-5657867 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 524-661
Cow position: chr12:7086226-7086363 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 527-660
Cow position: chr12:45135959-45135826 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 528-652
Cow position: chr12:8143764-8143640 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 531-660
Cow position: chr12:17929029-17928900 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 535-660
Cow position: chr12:403800-403677 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 535-661
Cow position: chr12:2704857-2704732 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 104, 18

Conread position: 536-652
Cow position: chr12:41514075-41513962 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 549-650
Cow position: chr12:31253209-31253309 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 549-652
Cow position: chr12:38185913-38186015 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 549-656
Cow position: chr12:28779410-28779520 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 551-657
Cow position: chr12:31711810-31711704 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 555-662
Cow position: chr12:35217956-35217849 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 558-651
Cow position: chr12:11090523-11090617 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 559-657
Cow position: chr12:23908162-23908061 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 564-661
Cow position: chr12:44877830-44877928 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 74, 0

Show alignments to all cow chromosomes.